Leptonychotes weddellii (Weddell seal): 102730486
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Entry
102730486 CDS
T08708
Symbol
FREM1
Name
(RefSeq) LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102730486 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lww04091
]
102730486 (FREM1)
Lectins [BR:
lww04091
]
C-Type lectins
Lecticans
102730486 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Motif
Other DBs
NCBI-GeneID:
102730486
NCBI-ProteinID:
XP_030895937
UniProt:
A0A7F8RR49
LinkDB
All DBs
Position
Unknown
AA seq
2079 aa
AA seq
DB search
MSAPTWGGPGALPLLLLLGWAGATFISLNRGLRLLKGSSAFLSGDDLKFAIPKEKDACKV
EVVMNEPMTQRVGKLTPQVFDCHFLPNEVKYIHNGCPILDEDAVKLRLYRFTETDTFTET
FILRVYLLEPDCNIIRRSNNVLEVSEFYGLSRAIDKNLLRFDYERTAGLECTVRLDPVGS
RLPAHGQMVLLEPRPEKPRGDQPHSFFPESQLGTELRCPGGSCALGLKKMGSVNVSCEEF
LLMGLRYQHTDPPSPNIDYISIQLDLTDGRSKIVYKSESAWLPVYIRAGFPNQIPRAAFM
AMFILEVDQFILTSLTTAVLDCEEDETPKPLLVFNVTKAPPQGYVTHLWDHTRPVSSFTW
KDLSDMQIAYQPPNSSYSARRHYEVEVEVYDFFFERSAPITVHISIRTADTNAPRVSWNT
GLSLLEGQSRAITWEQFQIVDNDDIHAVQLVTVGGLQHGRLTLRGGKGFLFTVADLQAGV
VRYHHDDSDSTKDFVIFRIFDGHHSIRHKFPINILPKDDSPPFLISNVVIELEEGQTILI
QGSMLRASDMDSSDDYIFFNITKPPQAGEIMKKPGPGLIGYPVPGFLQRDLFNGIIYYRH
FGGEIFEDFFEFVLWDSHEPPNLSVPQVVTIHITPVDDQLPKEAPGVSRHLVVKETEVAY
ITKKHLHYIDTEYDRELLYTITTPPFFSFGHRHLDAGKLFMVDSIPKLTKNPAAPGLRSF
TQHAVNHMKVAYMPPMRDIGLHPGHVQFAFSISNQHGGTLHGICFNITILPVDNQVPEVF
TNALRVTEGGQCVISTENILVSDVDTELDNICLSLQRLPQCGRVELDGFPLNTGGTFSWG
DLCALKVRLEHFLDLFFDMLWPSSGSVVRQSKRKKLCGEIGLVPCFDTITLVVSDGEAGP
SVNGCCYNGPHPSVPLHESFPVYDLNITVHPVDNQSPSIAIGTMFVVDEGFSAAVTINHL
SATDPDTAADDLEFVLASPPQFGYLENTLPSAGFEKSNMGISIGSFQWKDMKALHINYVQ
ARHLRMEPTADQFMVYVTDGKRRSLEIPFYIIINPTNDEAPDFVVQNITVCEGQMKELDS
SIINAADLDVPKDPLLFSITHKPRHGLLINGVLSKDFPQNKQPVNPGQKHELVQNFSLEL
LKNGLKLMYVHDDSESLGDDFTVQLSDGKHKILRTISVEITPVNDEKPMLSKKAEITVKM
GETRIISSAILSAIDEDSPRERIYYLFESLPQNGQLQLKIGRNWIPLYPGMKCTQEEVDL
NLLRYTHTGAMDSQDQDSFTFYLWDGDNRSPAFDCHITIKDMGKGDTVILVKPLVVSKGD
RGFLTTSTLLAVDGTDKPEELLYVITSPPRYGQVEYVRYPGVPITSFSQMDIAGHTVCYV
HKSKAAVSRDTFRFLVSNGLQTKHGLFEITLETVDRALPVVTRNRGLRLAEGATGLLSPD
LLQLTDPDTPAEKLTFVLAQLPQHGQLYLRGTELLQHNFTQRDVDSRDVAYRHLGGDSRV
DCFTFVATDGTNQGFVVAGRVGQEPVSFTIEVDQLDKTAPYITHLNSPSQVGLLKNGCYG
IYLTSHVLKASDPDTDDDLIIFKILRGPQHGHLENTTGEFIHEKFIQKDLNSKTILYIIN
PSLEVNSDIMEFQIMDPTGNSATPQILELKWSHIEWSQTEYEVCENVGMLPLEITRRGYS
MDSAFVSVKVTALKYKLSGXNLGMSTKMWNIAITYDGLEEDDEAFEVILNSPVNAVLGTK
TKAAVKILDSKGGQCRPSYSFNPNKHNARKKGIWHLLSPGSSSPTTSGSFHLERRPLTSN
KWPAVTRGDTRQGFESPDLSRMKLRTRGSGKTVLPSSVYRNGTDIIYNYHGTVSLTLEED
GSPSHQRKAKVSIIRQLPKTSREAELPQADKVESTTDSHFPRQDPLPSFPKNCTLELKGL
FHFQESLRKLYKCDGVTWKAWSPQSEEVEGKSCPAGWHHHSGYCHSLITEQKASWNTAAR
ACKEHHLGSLVTVLSRRHMQWLWDISGGKPFWIGLNDRVRAGRWEWIGGEPVTFTNWRKG
PPQRLKRGKNCVLAQRQGKWQTQDCGKGKAHNYVCSRKL
NT seq
6240 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctccgacctggggtgggcccggggctttgcccctgctgttgctcctaggctgg
gccggtgcgaccttcatcagccttaatcgtgggctcaggctgctgaagggcagctctgcc
ttcctgtcgggagatgacctgaagtttgccatccccaaagaaaaagatgcttgcaaagtg
gaagttgtgatgaacgagccaatgactcaaagggttgggaaactcaccccacaggtcttt
gactgccatttccttcccaatgaagtaaagtatattcacaatggttgcccgattcttgat
gaagatgcagtgaagcttagactgtacagatttactgagacagataccttcacggaaacc
tttatcctgcgggtctatctcctggaacccgactgtaacatcatccgtaggagtaacaat
gtcctggaggtgtctgaattctatggcttgtccagagccattgataagaacctgctcaga
tttgattacgagaggacagccggcctggagtgtacggtcaggctggatcctgtgggaagc
cggctgccagcccatggtcagatggtcctgctggagcctcggccagaaaaacctcgtgga
gatcagccacacagttttttccctgagtctcaactgggaacagagctgaggtgtccaggt
ggaagctgtgccctgggactgaagaaaatgggaagtgtcaacgtgagctgtgaggagttc
ttgctgatgggtcttcgttatcaacacacggatcccccttctcccaacattgactacatc
tctatccagctggacctcacagatggcaggagcaaaattgtatacaagtcagagagtgcg
tggttgcccgtctatatcagagctggctttcctaatcagattccaagggccgcgttcatg
gccatgtttattctggaagtggatcagtttatcctgacctccttgactacagccgtcctg
gactgtgaagaggatgagacccctaagcccttgctggtgttcaacgttacgaaagcccca
ccccagggctacgtgactcatctgtgggatcacaccagacccgtctcctcgttcacctgg
aaagatctgagtgacatgcagatagcctaccagccaccgaacagcagctattctgcacgg
agacattacgaggtggaggtggaggtttatgatttcttcttcgaaaggagtgcacctatc
actgtccacatctccatcagaacagcggatacaaatgccccccgagtgtcctggaacaca
ggtctgagtcttctagaggggcagtctcgggccatcacttgggaacagtttcagattgtc
gacaatgatgacatccatgctgtccagctggtcaccgtgggcggcctgcagcatggacgg
cttacactaagaggcgggaaaggatttctcttcactgtggctgaccttcaggctggagtt
gttcgctatcatcatgacgacagtgactccaccaaagacttcgtgatcttcaggatattt
gatggccatcacagcatccgccataagtttcccatcaacatcttgcccaaagatgacagt
cccccattcctcataagcaacgttgtgattgaactggaggaggggcagaccatactgatc
cagggttccatgctgagagcatcagacatggactccagtgatgactacatcttctttaat
atcacaaaacctcctcaggctggagagatcatgaagaagccagggccagggctgataggc
tatcctgtccctggcttccttcagagggatctatttaatggcatcatttactatcgtcac
tttggtggagagatctttgaagacttttttgaatttgtcctgtgggacagccatgaacct
ccaaatctctcagtgccacaggtggtgaccatccatatcactccagtggatgaccagctt
ccaaaagaggcccctggagtttctcggcatttggttgtcaaggaaactgaggtggcctac
ataactaagaaacatctacattatatagatacagaatatgacagggagcttctctacacg
ataacgacacctccatttttctctttcggccacagacatctggatgctgggaaattgttt
atggtcgatagcattccaaagctgaccaaaaatcctgcagccccggggctgagatcattc
actcagcatgctgtgaaccacatgaaagtggcctacatgccacccatgagagatataggc
ctccatccgggacatgtccagtttgccttttccatcagtaaccaacatggtggcactttg
cacgggatctgctttaacattacaattcttccagtggacaatcaagttcctgaggtgttt
accaatgccctgagagtgactgagggaggtcagtgtgtcatcagcacagagaacattctg
gtttctgatgtggataccgaactggacaacatctgcctctccctacaaagattgcctcag
tgtggaagggtggagctggatggatttcctctaaacacaggaggcacattttcttgggga
gacctctgtgccttaaaagttaggttagaacatttcctggatttattttttgatatgctt
tggccttcatctggatcagttgtgaggcagagtaagagaaagaaattgtgtggtgagatt
ggcctggtgccttgttttgataccattacattggtggtttcggatggagaagctggccct
tctgtgaatggctgttgctacaacgggcctcatccatctgttcctcttcatgagtccttt
ccagtgtatgacctcaatatcacggtacatccagtggacaaccaatcaccttcaattgca
ataggtaccatgttcgtggtagatgagggtttctctgcagccgttaccattaaccatttg
tccgccactgatcctgacactgcagcagacgacttggaatttgttttggcttcccctccc
cagtttggctaccttgaaaacacgcttccttctgcaggttttgaaaaaagcaatatgggc
ataagcataggttcgttccagtggaaagacatgaaagcattgcatattaactatgtgcag
gccaggcatctgaggatggaaccaacagctgaccagttcatggtgtatgtcacagatggg
aagcgacgctccttggagataccattttacattatcatcaaccccacaaatgatgaagct
cctgactttgtagtgcagaatattactgtgtgtgagggtcagatgaaagaactggattcc
tccatcatcaacgctgctgatctagatgttcccaaggaccctttgctgttcagcatcact
cataaaccacgccatggcctcctcatcaatggggtgcttagcaaagactttcctcaaaat
aagcagcctgtcaaccctggccagaagcatgaacttgttcagaacttttccttggaactt
ctcaagaatggactgaagttgatgtatgtgcatgatgactcagagagccttggtgatgac
tttacagtccagttgtcagatgggaaacataagatattaagaacaatttcagtggagatc
accccagttaatgatgagaaaccaatgctgagcaagaaggctgaaataacagtgaaaatg
ggtgaaactcgtattatttctagtgccattctttcagccatagatgaagactcacccagg
gagaggatttactatttgtttgaaagtcttccccaaaatgggcagcttcaactcaagata
gggaggaactggatccctctctaccctggcatgaaatgcactcaggaggaagtggatctg
aacttgctcagatacacacataccggggcgatggattcccaggaccaagacagcttcacc
ttctacctctgggatggtgacaacagatcaccagcatttgactgtcacatcaccatcaag
gatatgggaaaaggtgatactgtcatcctcgtgaaaccgctggtggtgtctaaaggtgac
cgaggtttcttgacgaccagcactctccttgctgtggatggaacagacaaacccgaggaa
ctactctatgtcatcacctcccctccgcgctatggccaggttgagtatgtccgctatcct
ggagtccccattacaagcttcagccaaatggacatagcaggacacacagtctgctatgta
cataagagcaaggcagctgtctcccgtgacaccttcagattcctcgtcagcaatggcctg
cagaccaaacacgggctgtttgagatcacactggagactgtggacagagccttacctgtg
gtgaccaggaacagggggctgagactggccgaaggcgccacaggcctgctttcccctgac
ctcctccagctgaccgaccctgacaccccagcggagaagctcacctttgtgttggcccag
ctcccacagcacggccagctttacctgcgggggacagagctgcttcaacacaacttcact
cagcgggatgtggacagcagggatgtggcctacaggcacctgggaggggactcccgggtt
gactgctttacctttgtggccacagatgggacgaaccaaggctttgttgtggctgggaga
gtgggccaagagcctgtgtcgttcaccatcgaggttgaccagttggacaaaacagccccc
tacatcacacacttgaattccccttctcaagtggggctcctgaaaaatggctgttacggg
atttacctcacttcccacgtgttgaaggcatcagaccctgacaccgatgatgatctgatc
atctttaagattttacgaggcccccaacatggacatctggagaacacaacaggtgaattt
atccatgagaaatttatccaaaaggacttaaacagtaagaccattctttacatcattaac
ccatctttggaagtgaattcagatatcatggaatttcaaatcatggaccccacagggaac
tctgcgactcctcaaattttggaattgaagtggtctcatattgaatggtcacagactgaa
tatgaggtctgcgagaatgtgggcatgttgcccttggaaattaccagaaggggatattcc
atggactcagccttcgtgagtgtaaaggtaacagctctaaaatataaactgtcaggctaa
aacttgggaatgtcaactaagatgtggaatatagcaattacctatgacggattagaggaa
gacgatgaggcctttgaagtaattctgaactcccctgtgaatgcggttcttggcacaaag
acaaaagctgcagtgaaaattctggactcaaaaggagggcagtgccgtccttcatattcc
ttcaaccccaacaagcacaatgcacggaagaagggcatttggcacctgctgtccccaggc
tcttcctcacccaccacttctggttcctttcatctggaaagaagaccccttacatctaac
aagtggccggcagtcactaggggagacacccgacagggctttgagtctccagatctttct
cgtatgaagcttaggacccgggggagtggcaaaacggttcttccatcctctgtttataga
aatggaaccgacatcatctataattatcatggaacggtttccctgacgctggaggaggac
ggctctccatctcaccaacggaaggccaaagtatccattattcgtcagttaccaaagaca
agcagagaggcagagctgcctcaggcagataaggtagaatccacaactgactcacacttc
cccagacaggacccgctgccctcatttccaaagaactgcacactggaattaaagggactt
ttccatttccaagaaagcctccgaaagctatacaagtgtgatggggttacgtggaaagct
tggagcccccaaagcgaggaggtggaaggtaaatcctgcccagctggttggcaccatcac
tcaggctactgccactccttgatcacagagcagaaagcctcctggaacacagctgcccga
gcttgcaaggaacatcacctgggcagcctcgtaacagttctctctagacggcacatgcaa
tggctgtgggacatcagtggagggaaacccttctggataggtttgaatgaccgagtgcgt
gctggccgctgggagtggatcggcggggaacctgtcaccttcaccaactggaggaaaggg
ccccctcaacgtttaaagcgtggcaagaactgcgttttggctcagagacaagggaaatgg
caaacacaggactgtgggaagggcaaggctcacaattacgtgtgctccaggaaactctaa
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