Leptonychotes weddellii (Weddell seal): 102731140
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Entry
102731140 CDS
T08708
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lww04131
]
102731140 (VPS13A)
Membrane trafficking [BR:
lww04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
102731140 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Mer2
Motif
Other DBs
NCBI-GeneID:
102731140
NCBI-ProteinID:
XP_030881373
UniProt:
A0A7F8QMD3
LinkDB
All DBs
Position
Unknown
AA seq
3136 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVALKNLEIKENALSQLDVPFKVKVG
HIGNLNLIIPWKNLYTQPVEAVLGDIYLLIVPSSKIKYDPLKEEKQLLEAKQHELKRIEE
AKQKVADQEKLRVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDITNRDNPLSFGISLQ
NLSMQTTDQNWVPCLHDETEKLFCKLIRLDNLFAYWNVKSQLFYLNDYDESLDSLKKGIV
NGNIVPKGYDFVFRPISANAKLQMNRRSDFDFSAPKINLDVELHDIAIELNKPQYFSVME
LLESVDMMTQNLPYRKFRPDVPLHYHARDWWAYAIHGILEVNVCPRLRMWSWKHIREHRQ
KMKQYKELYKKKITTKKPTGEILMSLEELEKTLDVFNITISRQQAEVEVKKAGYRIFREG
AKDSEENKGWFSWLWTWSEPRSKEQPDVKPGILEEMLTSEEKTLLYEAIGYSETAVDPTL
PKTFEAMKFFVHLKSMSIVLREKRETPELLDIVVEEFSTLIVQRPGAQAIKFETKIDSFH
VTGLPDNSTKPRLLSSLDDATSLFQIIFEINPLDETVAQRCIIEAEPLEMIYDARTVNSI
VEFFRPPKEVNLAQLTSATLTKLEEFRDKTATGLLYIIETQKVLDLKINLKASYVIIPQG
GIFSPTSNLLLLDLGHLKVTSKSRSELPDMKPAGARLEEIMHRAYDSFDVQLTSIQLLYS
TVGDDWREARKLSVSTQHILVPMHFNVELSKAMVFMDIRMPKDSERGNRSRGRIQRSTSL
GTSQISQKMLPFLELPCVDDDSEEEFFDAPCSPLDEPLQSPTEIQSYQKKFQKPDCSKNM
IQYKIRFEVPEVLIQFYHLVGDFELPVVEVDVLGLGTDVELRTFDLKANAFLKEFCLKCP
EHTDANKKPIYLITTLDNTMEDLLTLEYVKAEKNLPNLKSTYNNAVQLIKVNFSSLDIHL
HTEALLNTINYFSNIIPQLEEKPATVSVAETEDKGEVVKKMPLKLSKNEDVITLQILAEL
SCLQIFIQDQKRNIAEIKIEGLDSEIIMRPAATEINAKLRNIIVLDSDKTAVYKKAVYIT
GKEVFSFKVISFVDATAGSAYTDMNVVDIQINLTVGCIEVVFVTKFLYSILAFIDNFQAA
KQALAEATVQAAGMAATGVKELAQRSSRMALDVNIKAPVVVIPQSPVSENVFVADFGLIT
MTNTFHIITESQSNPPPVIDLITIRLSEMRLYRTQFIDDAYQEVLDLLLPLNLEVIVERN
LSWEWYQEVPCFNVNAQLKPMEFILSQEDITTIFKTLYSNIWYEEGGGASSAGVKDQSSI
NSGATNASHHLEGTTVVTAAVVEVHSQASRVKTTLNMSFRTDYLTMVLYSPGPEQTSFTD
VRDPSLKLAEFKLENIISTAKMYTDDSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGF
DKKDMMDVKYRRVRDGWVTDLVLQETYICASVEFLLTVANVFLEAYTTGTAVETSVQTWT
AKEEVSVQESEKWEINIIIKNPEIVFVADMTRSDAPALVITTQCEICWKGDLENNTMTAA
IKDLQVRACPFLPVKRKGKITTVLQPCDLFYQATQIGTDPQVIDISIKSLTLKVSPVIIN
TVITITSALYTSKDTIPQETTSSTVHLWEKKDTKNLKMWFLEEPNEVENKAPTTELILKG
EMMRVNIDSIFIVLEAGIGPRTVPMLLAKSRFSGEGKNWSSLINLYCQLELEVHYYNEMF
GVWEPLLEPLEIDQTEDFRPWNLGIKMKKKAKKAIVESDTEEENYKVPEYKTVISFHSKD
QLNITLSKCGLVMLNNLVKAFTEAATGASTVFIRDLAPFMILNSLGLTVSVSPSDSFSVL
NVPLAKSYVLKNEESLSMDYVGTKDNDHFNAMTSLSSKLFFILLTPANHSTADKIPLTKV
GRRLYTVRHRASGVERSIVCQVDGVEGSKKITIRSPVQIKNHFSIPLCVYEGNTLLGTAS
PGSEFNIPLTSYRSPLSLKPEDEDYQACERIDFEEIIKNDGTFLKKKCKSKNTAKKPFNI
HVVPEKDNLSSLSVYSEDCWDLPYIMHLWPPILLRNLLPYKIAYYIEGNEHKVYTLNEGH
SAHICTVHLEKARLHLKLLDYLNHDWKSEYHIKPNQQDISFINFTCVTEIEKTDLDIAIH
VTYNIGQTVVAFHSPYWMVNKTSRMLQYKADGIHRKHPPNYKKPVLFSFQPKHFFNNNKV
QLMITDSELSDQFSIDTVGSHGAVKCKGLKMDYQVGVTIDLSSFNITRIVTFTPFYMIEN
KSKYHISVAEQGNDKWLSLDLEQCIPFWPEDASNALLIQVERNQGPPKKIHFNKQANCIL
LRLDNELGGIIAEVNLAEHSTVITFSDYHDGAAPFLLINHTKSDIVQYNQSSLSEIEDSL
PPGKAVFYTWADPVGSRKLKWRCGKSHGEVTQKDDMMTPINLGKKTIYLVSFFEGLQRII
LFTEDPRVFKATYESEKAELAEQEIVLALQDVGISLVNNYTKQEVAYIGITSSDVVWETK
PKKKARWKPMSVKHTEKLEKEFKEYTESSPSEDKVVELDTNIPVRFTPSGTNMKILQPHV
IAIRRNYLPALKVEYSTSAHQSSFRIQVYRIQIQNQIHGAIFPFVFYPIKPPKSVTMDSA
PKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDLGFVYALAELMTEAEVTEKTEIE
LFHKDIEAFQEEYKTASLADSSQVSLYEYFHISPIKLHLSVSLNSGREEAKDSEQQEGLM
AVRSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTASELQSEVIRHYSKQAIKQMYVL
ILGLEVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAG
AASKITSAMAKGVAAMTLDEDYQQKRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIV
TKPIKGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATETSDEVESLRP
PRFFNEDGVIRPYRLRDGTGNQMLQVMENGRFAKYKYFTHVMINKTDMLMITKSGVLFVT
KGTFGQLTCEWQYSFDEFTKEPFIVHGRRLRIEAKERVKSVFHAKEFGKIINFKTPEDAR
WILTKLEEAREPSPRF
NT seq
9411 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcaccctgggcatctggggaggagctgtggccttgaagaat
cttgaaattaaagaaaacgctctgagtcaactggatgtaccatttaaagttaaagttggt
catataggtaatcttaatcttataattccgtggaaaaacctgtatactcaaccagttgaa
gctgtcctgggagacatttatttactcatagtgccttcttctaaaataaaatatgatcct
ttaaaagaagaaaaacaactcttggaagcaaaacaacatgaacttaaacgaatagaagaa
gcaaaacaaaaagtagctgatcaagaaaaacttcgggtggagaaacaggacacttttacg
gaaaaattaattactcagatcataaaaaatcttcaagtcaaaatttccaacatccatatt
cgttatgaggatgatatcacaaatcgagacaacccactgtcatttggtatttcccttcaa
aatctcagcatgcagacaactgatcaaaactgggttccatgtttacatgatgaaactgag
aaactattttgtaagttaatccgattggataacctttttgcctattggaatgtgaaatct
cagttgttttaccttaatgattatgatgaatcattggacagcttgaagaagggcattgtc
aatggaaatattgttccgaaaggttatgattttgtttttcgccccatatctgctaatgcc
aaacttcagatgaatcggcgatcagattttgacttttctgcccccaagataaacctggat
gttgagttacatgacatagcaattgaacttaataaaccacagtatttcagtgttatggag
cttcttgaatcagttgatatgatgacgcaaaatctgccatataggaaattcagacctgat
gtacctcttcactatcatgccagagactggtgggcttatgctatacacggtattcttgaa
gtaaatgtctgcccccggttacggatgtggtcatggaagcatattagagaacacaggcaa
aaaatgaagcagtataaagaactgtataaaaaaaagataacaactaagaagccaactggt
gaaattctcatgtctttggaggagttggaaaagaccttggatgtatttaatataactata
tcaagacaacaggcagaagttgaggtaaagaaagctggatataggattttcagagaagga
gcaaaagattcagaggaaaataaaggatggtttagctggctgtggacttggtcagaacca
agaagtaaagaacaaccagatgttaagcctggaattcttgaagaaatgttgacctctgaa
gaaaaaactttactctatgaagcaattggctatagtgaaacagcagttgatccaaccttg
ccaaaaacatttgaagccatgaagttctttgttcacttgaaaagtatgtctattgttcta
agggaaaaacgagagacacctgagctgttagatattgtagtggaagaatttagcactttg
attgtgcaaagaccaggagcacaagccattaaatttgaaaccaaaattgattcatttcat
gttactggcttaccagataattcaacaaaaccccgcctcctttcttcattggatgatgct
acgtcactcttccaaattatatttgagataaatccattagatgaaactgttgctcaaaga
tgtatcatagaagctgaacctttagaaatgatatatgatgcaagaacagtgaatagtata
gtggaattcttcagacctccaaaagaggtaaatctagcacagctcacgtcagcgactttg
acaaaacttgaagaatttcgtgacaagacagcaacaggtctactgtatattattgaaaca
cagaaagttcttgatctcaaaattaatttgaaggcttcatatgttattatcccacaaggt
ggaatttttagccctacatcaaatctactacttttggatcttggtcatctaaaggtgaca
agtaaaagtcgttcagaattgccagatatgaaaccagctggggccagacttgaagagatc
atgcatagagcttatgattcctttgatgttcagcttacaagcatacagctgctttacagc
acagttggcgatgattggagagaagcacgaaaactcagtgtatctacacagcatattttg
gtacctatgcacttcaatgtggagctctctaaggccatggttttcatggatataaggatg
cccaaagacagcgagagagggaacagaagcagaggcagaattcaaaggtccacttctttg
ggaacatcacagatttcacagaaaatgcttcctttcttggaacttccatgtgttgatgat
gattcagaggaagaattttttgatgcaccatgtagtcccttggacgaacctcttcaatct
cctactgaaattcaaagttaccaaaaaaaatttcaaaagccagattgttcaaaaaatatg
attcagtataaaataagatttgaagtgccagaggttttgattcagttttatcaccttgtt
ggagattttgaactacctgtggtagaagttgatgttttaggattgggcacagatgttgaa
cttagaacatttgatttgaaagcaaatgcctttttgaaagagttctgcctaaaatgccca
gaacacactgatgcaaacaagaaaccaatttatttgattacaacactggataatacgatg
gaagatctgctaacattggaatatgtgaaggctgaaaagaatctacccaacttgaaaagt
acttataacaatgctgtgcaactgattaaggtgaatttttcctctttggatattcattta
catactgaagcacttctgaatacaataaattattttagtaatataattccacaattggaa
gaaaaaccagccacagtgtctgttgcagagactgaagacaaaggagaggtcgttaaaaaa
atgcctttaaaactatccaagaacgaagatgttattaccttgcagattttagcagaatta
tcttgtttacagatctttattcaagatcagaaacgtaacattgctgaaattaagatcgaa
gggcttgattctgagatcattatgaggcctgctgcaactgaaataaatgcaaagctaagg
aatataattgttttggattctgataagacagctgtatacaaaaaggctgtttacatcact
ggaaaagaagtttttagcttcaaagtgatttcttttgtggatgcaactgctggttctgca
tacacagatatgaatgtggttgacattcaaattaatttaactgttggttgcattgaagtg
gtttttgtcacaaaatttctttattctatattggcttttatagataattttcaagcggct
aaacaagccttggctgaggctactgttcaggcagcaggaatggctgctactggtgtaaaa
gaattggcacagaggagttctagaatggcgttggatgttaacatcaaagccccagtggtg
gtcatcccacagtctccagtttctgaaaatgtttttgttgctgattttggactaattaca
atgacaaacacattccatataataacagagagccagagcaaccccccgcccgttattgat
ttgataacaataaggttgagtgaaatgcgactctacaggactcaatttattgatgatgca
taccaggaagtactagatctgctattgccattaaatcttgaggtgattgttgagcgaaat
ttatcttgggagtggtaccaggaagttccttgttttaatgtaaatgctcagctaaagccc
atggagttcattcttagtcaagaagatataacaactatttttaaaacattatatagcaat
atatggtacgaagaaggtggtggtgcctcatctgcaggagtaaaagatcagagtagtatt
aatagtggagctactaatgcttcacaccatttagaaggaacgactgtagtgactgctgcc
gtggtggaagtacattcacaggcctctcgagttaagacaacattgaatatgagcttcagg
accgactatctcaccatggtactgtatagtccaggtcctgaacagacttcctttacagat
gttcgtgatccttctctgaaacttgctgaatttaagttggagaatatcataagcacggca
aaaatgtatacagatgactcaacattttcttccttttcattaaaaaactgtattttagat
gataaaaggccccatgtcaagaaggcaactcctagaatgataggactgacagtcgggttt
gacaaaaaggacatgatggatgtaaagtatagaagagtcagagatggttgggtgactgat
ttagtccttcaagaaacttatatttgtgcaagtgtggaatttctgctgacagttgcaaat
gtctttcttgaggcctacaccacaggcactgctgtagaaaccagtgttcaaacatggact
gctaaggaagaagtatctgtacaggaatcagagaagtgggaaattaatattattattaaa
aatcctgaaattgtgtttgtggctgatatgacaagaagtgatgctcctgcattagtcatt
acaacacaatgtgaaatttgttggaaaggtgaccttgagaataatacaatgactgctgcc
attaaagatcttcaagtgagagcatgcccatttcttccagtcaagagaaaaggcaaaatc
acgactgttttgcagccctgtgacttgttctatcaagctactcaaataggtacagatcca
caagtgattgatatatcaataaagtccctcacactaaaggtttcaccggttatcataaat
actgtgattaccataacatcagcactttatacatccaaggataccatcccacaagaaact
acttcttctacagtacacttatgggaaaagaaggatacaaagaatttaaaaatgtggttt
cttgaagagccaaatgaagttgaaaacaaagctcccacaactgaattgatactcaaagga
gagatgatgagagtgaacattgactctatttttatagttcttgaggctggaattggtcct
agaacagtgcctatgctgttggccaagtcacgtttttcaggggagggcaaaaactggagt
tctttgataaatctctactgtcagcttgaactagaagtgcattattacaatgaaatgttt
ggtgtatgggagcctttgcttgaacccttagaaattgatcagactgaggattttagacca
tggaatcttggaatcaagatgaaaaagaaagcaaaaaaggccattgttgagtcagatact
gaagaagaaaattacaaagtgccagaatataaaactgttatcagtttccattcaaaagac
caactaaacattacattatccaaatgtggccttgtaatgttaaataatttagtcaaggca
tttacagaagctgccactggagcttcaactgtcttcatacgggatctagcgccatttatg
attttaaattctcttggacttactgtctctgtttcaccaagtgattcttttagtgtactt
aacgttccattggcaaaatcatatgtattgaaaaatgaggagagtttaagtatggactat
gtgggaaccaaagacaatgatcatttcaatgcaatgaccagcctaagcagtaaactcttc
ttcattcttctcacacctgctaaccactctactgctgataaaatccctttaacaaaagtg
ggacgacgactgtacactgtaagacacagagcgtctggggttgaaagatcgattgtttgt
caagttgatggagtggaaggaagtaagaagataacaattcgctccccagtgcagattaaa
aatcatttttcaatcccactttgtgtttatgaagggaacactttattgggaacggcttca
cctggaagtgaattcaacataccattaacatcttaccgatcacccctttctctgaagcca
gaagatgaggactatcaagcgtgtgaaagaattgactttgaagaaattataaaaaatgat
ggcacttttctaaagaagaaatgtaaatctaaaaacactgctaagaaaccatttaacatt
catgttgtcccggaaaaagataatttgtcttctctgtcagtgtattcagaagattgttgg
gacttaccatacataatgcatttgtggccacctatcctgctccgaaatcttcttccttat
aaaattgcttattatatagaggggaatgaacataaagtttatactctaaatgaaggacat
tcagcccacatttgtactgtgcatttggaaaaagccagactacatttaaaattacttgac
tatcttaatcatgattggaaaagtgaatatcatataaaacctaatcagcaagatattagt
ttcatcaattttacctgtgttacagaaatagaaaagactgatttagatattgctatccat
gtgacttataatattggccagacagttgtggcatttcatagtccttattggatggtcaat
aaaaccagtcgaatgttacagtataaagcagatggaattcatcgaaagcatccacctaat
tataaaaagccagttctgttttcttttcaaccaaagcacttttttaataataataaggtt
cagcttatgataactgatagtgaattgtcggatcagttttcaattgatactgttggtagt
catggagctgttaaatgtaaaggcctgaaaatggactatcaagttggtgtcactatagac
ctcagcagttttaacattaccagaattgtgacatttactcctttttatatgatcgaaaac
aaaagcaaatatcatatatcagtggccgaacagggaaatgataaatggctctctcttgat
ttggagcagtgtatccccttttggcccgaggatgcttctaatgcacttcttattcaagtt
gaaagaaatcaaggccctcccaaaaagatacattttaacaagcaagcaaattgtatttta
ttgcgtctggataatgagcttggaggtattatagcagaagttaatttggctgagcattct
acagttattacattttcagattatcatgatggagcagctccattcctattaataaatcac
accaagagtgatattgttcagtataatcaaagttctctcagtgaaatagaagattccctc
cctcctggaaaagcagtattttatacatgggctgatccagtgggctctagaaagctgaag
tggagatgtggaaaaagccatggtgaagtaacacaaaaggatgatatgatgacacctata
aatttggggaaaaagaccatttatttagtttcattctttgaaggcttacaacgcattatt
ttattcactgaagatccaagggtatttaaagcaacatatgaaagtgagaaagcagagtta
gcagagcaagaaattgtgttggccttacaagatgttggaatttctctcgtcaacaactac
acaaagcaagaagtagcctatattggcattacaagttctgatgtggtttgggagacaaag
cccaagaagaaggcaagatggaagccaatgagtgtaaagcacactgagaagttagagaaa
gaatttaaggaatatactgaatcttcaccttcagaagataaggttgttgaattggacact
aacattccggttcgcttcacacctagtggtactaacatgaaaattctgcagccacatgta
atagctataagaagaaattatcttccagcattgaaagtagaatatagcacatccgcacat
cagtcatcatttagaattcaagtttacagaatacagatccaaaaccagatacatggtgct
atatttccatttgtgttttatccaattaaacctcccaagtcggtcaccatggattcagct
ccaaagccctttacagatgtcagtattgtcatgagatctgcaggacattcccagatatca
cgtattaagtatttcaaggtgttgatccaagaaatggacctcaggttagatcttgggttt
gtctatgctttagcagaacttatgacagaagccgaagtgactgaaaaaaccgagattgaa
ctttttcataaagatatagaagctttccaagaagaatataaaacagcttcattagcagat
tcatcacaagtcagtctctatgaatacttccatatatctcctatcaagttgcatttaagt
gtttcactgaattcgggcagagaagaagctaaagattcagaacaacaggaaggactgatg
gccgttcgttctttaaatcttttgctgaagagtattggtgccacccttacagatgtacaa
gatgtagtttttaagcttgcattttttgaactgaactatcagttccatacagcatctgaa
ctacagtctgaagtaataagacactattcgaaacaggccattaagcaaatgtatgtactc
attcttggacttgaagttttgggaaatccctttggcttgattagagaattttctgaaggt
gtggaagcatttttttatgaaccttaccagggagccatccagggtcccgaagagtttgtg
gaggggatggcattaggactgaaggcactagttggtggagctgttggtggattagctggt
gctgcctccaaaatcaccagtgctatggctaagggggtggcagccatgactctggatgaa
gactatcaacagaagagaagagaggccatgaataagcaaccagctggtctcagagaaggc
atcactcgtggaggaaaaggcttagtgtctggttttgtaagtggcataacaggaattgtt
acaaaaccaatcaaaggagctcaaaaagaaggagcagctggtttctttaaaggtgttggg
aaaggtttagttggagcagtggcaaggccaacgggaggcatcatagacatggccagcagt
acatttcagggaataaaaagagctacagagacttctgatgaagtggagagcctgcgaccg
cctcgattctttaatgaggatggagttatcagaccttacaggttgagggatgggactgga
aaccagatgttacaggtcatggaaaatgggagatttgcaaaatacaagtattttacccat
gtcatgatcaataaaacagatatgttaatgataactaaaagtggtgtattgtttgtaaca
aaaggaacatttggacagctcacatgtgagtggcagtacagttttgatgagtttaccaaa
gagccattcattgttcacgggaggagattacgcattgaagcaaaggaacgggtgaagtct
gtgtttcatgccaaagagtttggaaaaataattaacttcaagaccccagaggatgctagg
tggatcctcacaaaactagaagaagcaagagaaccttccccgagattctga
DBGET
integrated database retrieval system
