Leptonychotes weddellii (Weddell seal): 102731180
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Entry
102731180 CDS
T08708
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102731180 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lww01009
]
102731180 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lww04515
]
102731180 (PCDH1)
Protein phosphatases and associated proteins [BR:
lww01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102731180 (PCDH1)
Cell adhesion molecules [BR:
lww04515
]
Cadherins
Protocadherins
102731180 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
102731180
NCBI-ProteinID:
XP_006739530
UniProt:
A0A2U3Y746
LinkDB
All DBs
Position
Unknown
AA seq
1215 aa
AA seq
DB search
MGPLRPSPGPGGQRVLLPPLLLAVLLLLAASPGHATRVVYKVLEEQPPNTLIGSLAADYG
FPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLRECQNQLPGEPCILEFEVSITD
LVQNGSPRLLEGQIEVQDINDNTPNFASPVITLPIPENTNIGSLFPIPVASDRDAGPNGV
ASYELQAGPEAQELFGLQVAEDQEGKQPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRAS
SALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQA
PEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGTNPKSARAQVVVTVKDMND
NAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEGENAAVTCVVANDVPFQL
RQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDN
APVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSLDPEPAAKGLFSISPDTG
EIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVM
ENMPALSPVGMVTVIDGDKGDNARVQLTVEQDNGDFVIQNGTGTILSSLSFDREHQSTYT
FQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHQLLTPQTRLGETVSQVTAE
DIDSGVNAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPR
YGTALVHLYVNETLANRTLLETLLGHSLDTPLDIDIAGDPEYERSKQRGNILFGVVAGVV
AVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPKPSGKAAKGNKSKGKKSKSPKPG
KPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQP
QSPSASKKHQVVQDLPPANTFVGAGDSTSTGSEQYSDYSYRTNPPKYPSKQLPHRRVTFS
ATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLGPLALPEDHYERTTPDGSIGEME
HPENDLRPLPDVAMTGTCTQECSEFGHSDTCWMPGQSSPSRRTKSSALKLSTFVPYQDRG
GQEPVGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHDSCKDSATLEEIPLTQTSDFPPA
ATPASAQTAKREIYL
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggggcccctgaggcccagcccaggccccggggggcaacgggtgctgctgccccccttg
ctgctggcagtgctgcttctgctggcggcatccccaggccatgccactcgggtggtgtac
aaggtgctggaggaacagccacccaacaccctcattgggagcctcgcagctgactatggc
tttccagatgtgggccacctgtacaaactagaggtaggcgccccatacctgcgggtggac
ggcaagacgggagacatcttcaccactgagacgtctattgaccgcgaggggctccgtgaa
tgccagaaccagctccctggtgagccttgcatcctggagtttgaggtgtctattacagac
ctggtgcagaacggcagtccccggctgttagagggccagatagaggtacaggacatcaat
gacaacacgcccaacttcgcctcgcccgtcatcacgctacccatccctgagaacaccaac
atcggctcactcttccccatcccggtggcttctgaccgcgacgctggccccaacggtgtg
gcatcctatgagctgcaggccgggcccgaggcccaggagctgtttgggcttcaggtggcg
gaggaccaggaggggaagcagccacagctcatcgtgatgggcaacctggaccgggagcgc
tgggattcctatgacctcaccatcaaggtgcaggacggtggcagccccccacgtgccagc
agtgccctgctgcgagtcactgtgcttgacaccaatgacaacgcccccaagttcgagcgg
ccctcctacgaggctgaactgtccgagaatagccccatcggccactcggtcatccaggtg
aaggccaatgactcggaccaaggtgccaacgcggagatcgactacacattccaccaggcg
cccgaggtggtgaggcgtcttctgcgactggacaggaacactggacttatcactgtgcag
ggccctgtggatcgtgaggacctaagcaccctgcgcttctcggtgctcgccaaggaccga
ggcaccaaccccaagagtgcccgtgcccaagtggtggtgaccgtgaaggacatgaacgac
aatgcccccaccatagagatccggggcatagggttggtgacccatcaagacgggatggct
aatatctcggaggacgtggcagaggagacagccgtggccctggtgcaggtatctgaccga
gatgagggagagaatgcagctgtcacctgtgtggtggcaaatgacgtgcccttccagcta
cgccaggccagtgagacgggaagtgacagcaaaaagaaatatttcctgcagaccaccact
ccactcgactacgagaaggtcaaagactacaccatagagattgtggctgtggactctggc
aaccccccgctctccagcaccaactcgctcaaggttcaggtggtggacgtcaatgacaac
gcccctgtcttcacgcagagcatcactgaggtcgccttcccggagaacaacaagccgggt
gaagtggtcgccgaagtcaccgccagcgatgccgactcgggctctaatgcggagctggtt
tactctctggatcctgagccagccgccaagggcctcttcagcatctcgcctgacactgga
gagatccgggtgaagacatcccttgatcgggaacaacgggacagctatgagttaaaggtg
gtggcagctgaccggggcagcccgagcctgcagggcacagccaccgtccttgtcaatgtg
ctggactgcaatgacaatgaccccaagtttatgctgagtggctacaacttctcagtgatg
gagaacatgccggcactgagtccggtgggcatggtgactgtcattgatggggacaaaggg
gacaatgcccgggtacagctcacagtggagcaggacaatggtgactttgttatccaaaat
ggtacgggcaccatcctctccagcctgagctttgatcgggagcatcaaagcacctatacc
ttccagctgaaggcggtggacggtggcgtcccgcctcgctcagcttacgtcggcgtcacc
atcaatgtgctggatgagaatgacaacgcgccctttatcaccgccccttccaacacctcc
caccagctgttgaccccccagacgcgtcttggtgagacggtcagccaggtgacagctgag
gacatcgactccggtgtcaacgctgagttgacctacagcatcgctggtggcaacccttac
ggactcttccagattgggtcacactcaggagccatcacgctcgagaaggagattgagcgg
cgccaccacgggctgcaccgcctggtggtgaaagtcagtgaccggggcaagcccccgcgc
tatggcacggccttggtccacctttatgtcaacgagaccctggccaaccgcacgcttctg
gagaccctgctgggccacagcctggacacgccactggacatcgacatcgctggggatccg
gaatacgagcgctccaagcagcgtggcaacatcctctttggggtggtggccggggtggtg
gccgtggccttgctcattgccctggcggtgctcgtgcgctactgccggcagcgggaggcc
aagagtggctaccaggccgggaagaaggagaccaaggacctgtacgcccccaagcccagc
ggcaaagccgccaagggaaacaagagcaagggcaagaagagcaagtccccgaagcccggg
aagccagtagaagacgaggacgaggccgggctgcagaaatccctcaagttcaacctgatg
agcgacgcgcccggagacagcccccgcatccacctgccgctcaactacccaccgggcagc
cccgacctgggccgccactaccgctccaactccccactgccttccatccagctgcagccc
cagtcaccctcggcctccaagaagcaccaggtggtgcaggacctgccacccgcaaacaca
tttgtgggcgctggagacagcacgtccacgggctcggagcagtactccgactacagctac
cgcaccaacccccccaaataccccagcaagcagttacctcaccgccgcgtcaccttctcc
gccaccagtcaggcccaagagctgcaggacccgtcccagcacagttactacgacagtggc
ctggaggagtctgagacgccatccagcaagtcatcctcgggaccccgactcggtcccctg
gctctgcctgaggatcactatgagcgcaccacccccgatggcagcataggagagatggag
caccccgagaacgacctgcgccctttgcctgatgtggccatgacgggcacatgtacccag
gagtgcagcgagtttggccactccgacacgtgctggatgcctggccagtcgtctcccagc
cgccggaccaagagcagcgccctcaaactctccaccttcgtgccttaccaggaccgagga
gggcaggagcctgtgggcgccggcagccccagccccccggaagaccggaacaccaaaacg
gcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagccatgattcctgc
aaggactcggccaccttggaggaaatccccctgacccagacctcggacttcccacctgca
gccacaccggcatctgcccagacagccaagcgcgagatctacctgtga
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