Leptonychotes weddellii (Weddell seal): 102732817
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Entry
102732817 CDS
T08708
Symbol
DDX60
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lww03019
]
102732817 (DDX60)
Enzymes [BR:
lww01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102732817 (DDX60)
Messenger RNA biogenesis [BR:
lww03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
102732817 (DDX60)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN-like_DDX60
Helicase_C
Motif
Other DBs
NCBI-GeneID:
102732817
NCBI-ProteinID:
XP_006727301
UniProt:
A0A2U3X775
LinkDB
All DBs
Position
Unknown
AA seq
1438 aa
AA seq
DB search
MDLEEHVMVLERMSQLILSAVPKAEYSSLFNDFVESEFFLIDGDSLLATCICEKSLKPGQ
QLHFFYLVECYLMDLISKGGQFAIVFFKDAEYAYFNFPELLPLRTALILHLQHNTSIDVR
TKFSGCLSQEWGIFLEDSYPYYLIVADEGLNHLQTYLFNFLITQSWAMKVNIVLSSGQTS
DILRLYAYLMPSMYKNQQFFKENKKKIESAYKTLIKQLEECRISALESLFGNIKWKNMME
EACETISQLKQLWPEGSDIRRVLCVTSCSLSLRMYHHFLENRKKTTSIEKTNIQEGESNC
LALQEMEDLCKLHCLSVVFLLHLPLSQRACTRFITSHWTKNIHTFLEMKKWCEYFILSNI
NICEFWNLNLIHLSDLSDELLLKNIAFYYENENVEGLHLNLGDVIMKDYEHLWNTVSKLV
RKFAVGKPFPLRTTKLSFLEKNPSPIKDTAKENIPNLGFISMSCEVVDKFVGDLLTDLPF
LKSDDPIVTSLVKQKEFDELVHWHSHRPLSDDYDRTKCQFDEKSRDPRCLRSVQKYHVFQ
RFYGKSLESVSPKVVVTQAVKPKDKFIAPKNKKAHETKAEVITRENKKRLFAKEEEKEEK
KWSVLSFSIEEEMKENLNSGIKNLEEFLKSCKSNSVKFRVEMVALTACLKAWKEHCRGKG
ETTKDLNIAVQMMKRIHSLMEKYPELLQEADQQLIARCLKYLGFDELASSLYPTQVARDD
MKKTDKYSIGIGPVRFQLQYMGHYLIRDERKDPDPRVQDFIPDTWQIEKYGFPSDLTLSP
RETIQLYDTMFQFWESWPRAQEFDPEKFIHFKNKIVIKKLDARKYEESLKAELTSWIKNG
HAEEFVGTICILKPSPGVIFNLRDVEQTAICVRSFLEQKQKRQRPPKADKEAYDMTNKLR
KVKKSIEKQKTIDEKSQKNPRKMDQILIHEAEHNNLLKTLEKNLEIPQECTYANQKAIDT
ETLQMVFDRVKFTRKGAELKALARRGIGYHHSSLNFKEKQLVEILFRKGFIRVVTATGTL
ALGINMPCKSVVFAQNSIYLDALNYRQMSGRAGRRGQDLLGDVYFFDIPLPKIEKLIKSN
VPELRGQFPLGITLVLRLMLLASKGDDPEDAKAKVLSVLKHSLLSFKKPRVMKMLKLYFL
FSLQFLVKQGYLDQEGKPMGFAGLVSHLHYHEPSNLVFVSFLVKGLFHNLCQPTREGSKH
FSQDVMEKLLLVLANLFGRRPLPAKFQETTVKFYQSKVFLDDLPKDFNDALREYNMDVTK
DFASFLLNVAKLADMKQEYQLPLSKINFTGKECEGSELVSHLMNCKEGRAAISPFVCLSG
NSDGDLLLPNTPNHVVLRTIGINHTQAPVLWSEILDDQGRRMPLNAYALDFYKHGSLTGL
VQDNGINEGAAYYLLKDFALTIRSISVSLRELCENEDDNVVLAFEQLSNTFFEKLDGV
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggatttagaagaacacgtgatggttttagagagaatgtcacagctgattttgagtgca
gtgccaaaagctgaatattccagtttattcaatgattttgttgaatctgaattttttctg
attgatggagattcattacttgctacatgcatatgtgagaaatcattaaagccagggcag
cagctccacttcttctatctggttgaatgctatcttatggatcttatcagtaaaggagga
caatttgccatagttttcttcaaggatgctgagtatgcatatttcaacttccctgaactt
cttcctttgagaactgctttaattcttcatcttcagcataataccagcattgatgttcga
acaaaattttctggatgcctatcacaggagtgggggattttcttggaagacagttaccca
tattacctgatagttgccgatgaaggcctgaaccatctacaaacataccttttcaacttt
ttaattactcagtcttgggcaatgaaggtcaacattgtgctttcctcagggcaaacatct
gatattcttcgactttatgcataccttatgccaagcatgtataaaaaccaacaatttttc
aaagagaataaaaagaagattgagagtgcttataaaaccctgattaaacaattggaagaa
tgtagaatttcagcactagaatctctttttggaaatataaaatggaagaatatgatggaa
gaggcatgtgaaactatttctcagcttaagcaactctggccagaaggatctgacattcgg
cgtgttctttgtgttacttcatgctcattgtctttgagaatgtaccatcactttttagaa
aatagaaagaagactacctctattgagaaaactaacatccaagagggggaaagtaattgc
ttagccctgcaagagatggaagatttgtgtaaactgcattgtctcagtgtggttttccta
ctccacttacctctttctcaaagagcctgcactagattcatcacttcccactggactaag
aacattcacactttcttagaaatgaaaaagtggtgtgaatatttcatcctaagtaatata
aacatttgtgagttttggaatctgaatttaattcacctttcggacttaagtgatgaactt
ttgttgaagaatattgctttttactatgaaaatgaaaatgttgaaggcctacatttgaat
ttgggagatgtcattatgaaagattatgaacatctctggaatactgtgtcaaagttggtc
agaaagtttgctgttggaaagccatttcctctgagaacaacaaaactttcttttcttgaa
aagaatccatcaccaatcaaagatactgccaaggaaaacattcctaatttgggatttatt
tcaatgtcatgtgaagtggttgataagtttgttggtgaccttttgacagatttgcctttc
ttaaagagtgatgatcctattgtaacttcactagttaaacaaaaggaatttgatgaactt
gtgcattggcattctcacagaccccttagtgatgattatgacaggacgaagtgtcaattt
gatgaaaaatctagagatcctcgttgtctcaggtctgtgcagaagtatcatgtttttcaa
cgattttatgggaaatcattagaatcagtctctccaaaagttgttgtaactcaagctgtc
aagccaaaggataagttcattgcacccaagaacaaaaaggcacatgagaccaaggctgaa
gtaattactagagagaataaaaagaggttatttgctaaggaagaagagaaagaggagaaa
aaatggagtgttctgtcattttctattgaggaggaaatgaaagaaaacttaaactctgga
ataaagaacctggaagagtttttgaaatcatgtaaaagtaactcagtgaaatttcgagtt
gaaatggtagccttaactgcctgcttgaaagcatggaaagaacattgcagaggtaaaggt
gaaaccacaaaagatttaaatatagctgttcaaatgatgaaaaggatccactccttgatg
gaaaaatacccagaacttttgcaggaggcagatcagcaactcatagccagatgcctgaag
tatttaggatttgatgaattggcaagttctttatatccaacccaggttgcaagagatgac
atgaagaaaacagataaatactcaattggcattgggccagttcggtttcaactacaatac
atgggccattatttgatacgagatgagagaaaagatccagatcccagggttcaggatttt
attcctgacacatggcagattgaaaagtatggatttccttctgatcttaccctttcccct
cgagaaaccatccagctttatgataccatgtttcagttctgggaaagctggcccagggcc
caggagttcgatccagagaaattcattcattttaagaataaaatagtcattaaaaagttg
gatgctagaaaatatgaagagagcttaaaggcagaactaacaagttggatcaaaaatggc
catgccgaggagtttgtaggaactatttgtatattaaaaccttcacctggggtcatattc
aacttaagagatgtagaacaaacagctatatgtgtgagaagtttcctggagcaaaagcaa
aagagacaaagacctcctaaagctgataaagaagcctatgacatgactaacaaacttcga
aaagttaaaaaatccattgagaaacaaaagacaatagatgaaaaaagccagaaaaatccc
agaaaaatggaccaaatcctaatacatgaagctgaacataataatctactcaagacttta
gagaagaacctggaaatccctcaggagtgcacatatgctaatcaaaaagctatagacact
gagactttgcagatggtgtttgatcgagtaaaattcacaagaaagggtgcagagctgaag
gctttggcaagaaggggtattggatatcatcatagctctttaaacttcaaagaaaagcag
ttagttgagattctttttaggaaaggttttattagggtggtgacagctactgggacactt
gctttaggaatcaacatgccttgtaaatctgtggtttttgctcaaaactcaatctatctg
gatgctttaaattacagacagatgtctggacgtgctggaagacgaggtcaagacctgctg
ggagatgtatatttctttgatattccattgcccaaaatagaaaaactcattaaatccaat
gttcctgaactgagaggacaattccctctcggcattaccctggtcctgcgactcatgctg
ctggcttccaaaggagatgacccagaggatgctaaagcaaaggtgctgtcagtgctaaag
cattcattgctgtccttcaaaaaacccagagtcatgaagatgttaaaactttatttcttg
ttttctttgcaattccttgtgaaacagggctatttagatcaagaaggtaaaccaatgggg
tttgctggacttgtatcacatttgcattatcatgagccttctaatcttgtttttgtcagt
tttcttgtaaaaggccttttccataatctctgtcagccaactagggaaggctcaaaacat
ttttctcaagatgttatggaaaagctattgttagtcttggcaaatctgtttggaagaaga
cctcttccagcaaagttccaggagactactgtcaagttttatcaatcaaaggtgttcctt
gacgatctccctaaggattttaatgatgctttacgtgagtataacatggacgttacaaag
gactttgcctccttcctactaaatgttgccaaattggctgatatgaaacaggaatatcaa
ctcccattgtcaaaaataaatttcacaggaaaagaatgtgagggctctgaactggtttct
catttgatgaactgcaaagaaggaagagcagctatttctccatttgtttgtctctccgga
aactctgatggtgatttgcttctaccaaatactccgaaccatgtcgttctacgcacaatt
ggtatcaatcacactcaggctcctgtgctgtggtcagagatattggatgaccaaggaaga
agaatgccacttaatgcttatgcacttgatttctataaacatggttccttgacaggacta
gtccaggacaacgggataaatgaaggagctgcttattacttgttgaaagattttgcactc
accattagatctatcagtgtttccttgcgtgaactatgtgaaaatgaagacgacaacgtg
gtcttagcatttgaacaattgagtaacaccttttttgaaaaacttgatggagtttaa
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