Leptonychotes weddellii (Weddell seal): 102733494
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Entry
102733494 CDS
T08708
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lww03019
]
102733494 (TNRC6A)
03036 Chromosome and associated proteins [BR:
lww03036
]
102733494 (TNRC6A)
Messenger RNA biogenesis [BR:
lww03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102733494 (TNRC6A)
Chromosome and associated proteins [BR:
lww03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102733494 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
CreD
Motif
Other DBs
NCBI-GeneID:
102733494
NCBI-ProteinID:
XP_030893154
UniProt:
A0A7F8RJ81
LinkDB
All DBs
Position
Unknown
AA seq
1819 aa
AA seq
DB search
MRELEAKATKDVERNLSRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQKIKDINHNT
SGSHYENSQRGPVSSPSDSSTNCKNAVVNDSPEKEAWPSVPGSDPELASECMDADSASSS
ESERNITIMASGSTGGEKEGLRNSTGLGSQNKFVVGSSSNNVGHGSSTGPWGFSHGAIIS
TCQVSVDAPESKSESSNNRMNAWGTVSSSSNGGLNPSTLNSASNHGAWPVLDNNGLALKG
PVGSGSSGINIQCSTLGQMPNNQSINSKVGGSSTHGTWGSLQETCESEVSGTQKVSFSGQ
PQNITTEMTGPNNTTNFMTSSLPNSGSVQNNELPGSTGAWRVSTMNHPQIQAPSVMNGTS
LSHLSNGEPKSGGSYGTTWGAYGSNYSGDKCSSPNGQANGDTVNATLMQPGVNGPMGTNF
QVNTNKGGGVWESGAANSQSASWGSGNGANSGGSRRGWGTPAQNTGTNIPSVEWNKLPSN
QHSNDSANGNGKKFTNGWKSTEEEDQGSAASQTNEQNSVWAKTGGTVESEGSTESTGRLE
EKATGENQSRDRRKIDQHTLLQSIVNRTDLDPRVLSNSGWGQTPIKQNTAWDTETSPRGE
RKTDNGTEAWGSSATQTFNSGACIDKTSPTSNDTSSVSGWGDPKPALRWGDSKGSSCQGG
WEDDSAATGMVKSNQWGNSKEEKSAWNDSQKSKQGWGDGQKSNQGWSVSAGDNWGETSRS
NHWGEANKKSSSGGSDSDRSVSGWNELGKTSSFTWGNNINPNNSSGWDESSKPNPSQGWG
DPPKSNQSLGWGDSSKPVGSPDWNKQQDIVGSWGIPPATGKPPGTGWLGGPIPAPTKEEE
PTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNVPNGSSRSDQQAQVHQLL
PSASAISNKEAGSGSGWGEPWGEPSTPATTVDNGTSAWGKPIDSGPSWGEPIATASNTST
WGSSSVGPQALSKSGPKSMQDGWCGDDMPLPGNRPTGWEEEEDVEIGMWNSNSSQELNSS
LNWPPYTKKMSSKGLSGKKRRRERGTMKGGNKQEEAWINPFVKQFSNISFSRDSPEENVQ
SNKMDLSGGMLQDKRMEIDKHSLNIGDYNRTVGKGPGSRPQISKESSMERSPYFDKDGIV
ADESQNMQFMSSQSMKLPPSNSALPNQALGSIAGLGMQNLNSVRQNGNPSMFGVGNTAAQ
PRGMQQPPAQPLSSSQPNLRAQVPPPLLSPQVPVSLLKYAPNNGGLNPLFGPQQVAMLNQ
LSQLNQLSQISQLQRLLAQQQRAQSQRSVPSGNRQQQDQQGRPLSVQQQMMQQSRQLDPS
LLVKQQTPPSQQQPLHQPAMKSFLENVMPHTTPELQKGPSPINAFSSFPIGLNSNLNVNM
DMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAISSGFRLEESPFVPYDFMNSSTSP
ASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYVTPGSVINNLSI
NTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVPLSSTAQSTSARNSDSKLTW
SPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQKPPLSTWDNSPLRVGGGWGNSDA
RYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGNALVRY
SSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQSQSLTPSPSWQSLGSSQSRLG
SLDCSHSFSSRTDLNHWNGAGLSGTHCGDLHGTSLWGTPHYSTSLWGPPSSSDPRGISSP
SPINAFLSVDHLGGGGESM
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattggaagctaaagctaccaaagacgtagaaaggaatcttagcagggattta
gtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaagacgacaagaaaaag
aaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagatataaaccacaatact
tcaggatcccattatgaaaattcgcagcggggacctgtgtcttctccgagtgactctagc
acaaattgtaagaatgctgttgtaaacgactcccccgaaaaagaagcatggccctcagtc
cctggcagtgatccagagttggcttcagaatgtatggatgctgattctgcctccagttct
gaatcagagagaaacatcactatcatggcttcaggaagcaccggtggtgaaaaagaaggc
cttcggaatagcactggacttggttcccaaaacaagtttgtggttggtagcagcagcaat
aatgtgggccatggaagtagtactgggccatggggtttttcccatggagccataataagc
acatgtcaggtctctgtggatgctcctgaaagcaagtcagaaagtagcaacaatagaatg
aatgcttggggcactgtaagttcttcatcaaatggagggttaaatccaagcactttgaat
tcagctagcaaccatggtgcctggccagtattagacaacaacggacttgccctcaaaggg
cctgtagggagcggtagttctggcatcaatattcagtgcagtaccttaggccagatgcct
aacaatcagagtattaactctaaagtgggtggttcttccacccatggtacctggggaagc
cttcaggaaacttgtgaatctgaagtaagtggtacacagaaggtttcattcagtggtcaa
cctcagaatattaccactgagatgactggaccaaataacactactaactttatgacctct
agtttaccaaactccggttcagtacagaataatgaactgcctggtagtacaggggcctgg
cgtgtgagcacaatgaatcatcctcagatacaggctccgtcggttatgaatggcacttcc
ctttctcaccttagcaatggagagccaaaaagtggaggctcttacggtactacgtggggt
gcctatggttctaactactctggagacaaatgttcgagccctaacggccaagctaatggt
gacactgtgaatgcaactctaatgcagcctggcgtaaatgggcctatgggcactaacttt
caagtgaacacaaataaaggaggaggcgtgtgggagtctggggcagcgaattcccagagt
gcatcgtggggaagtggaaatggcgcaaattctggaggaagtcgacgaggatggggaact
cctgcacaaaacactggcactaatatacccagcgtggagtggaacaaactgcctagcaat
cagcattccaatgacagtgcaaatggcaatggtaagaagtttacaaatggatggaagtct
actgaggaagaggatcaaggttctgccgcatctcagacaaatgagcagaacagcgtatgg
gccaaaacaggaggtacagtggagagtgaaggtagtacagaaagcactggacgcctcgag
gagaaagcaactggggaaaatcagagtagagataggagaaaaattgatcagcacacatta
ctccaaagcatcgtaaacagaactgacttggatccacgtgtcctctccaactctggttgg
ggacagactcctattaagcagaatactgcctgggatacggaaacatcacctagaggggaa
agaaagactgacaatgggacagaggcctggggaagctctgcaacacagacttttaactca
ggggcatgtatagataagactagccctactagtaatgatacctcatctgtatcggggtgg
ggagatcccaaacctgctctgaggtggggagattccaaaggctcaagctgccagggggga
tgggaagatgactctgctgctacaggaatggtcaagagcaatcagtgggggaacagcaaa
gaagagaagtccgcatggaatgattcgcaaaagagcaaacagggatggggtgatggacaa
aaatcaaaccaagggtggtccgtttctgccggtgataactggggggaaacttcaaggagt
aaccattggggtgaggctaataagaaatctagctcaggaggtagtgacagtgaccggtcc
gtttctggttggaacgaacttggtaaaactagttcctttacttggggaaataacataaat
ccaaataattcatcaggatgggatgaatcttctaaacctaatccttcccagggatgggga
gatcctccaaagtctaatcagtctctaggttggggagattcgtcaaagccagtcggttct
ccagactggaacaagcaacaagacattgtcgggtcttggggaatcccaccagctacaggc
aaacctcctggtacaggctggctgggaggacctataccagccccaacaaaagaagaagag
cccacaggctgggaggaaccatccccagaatccatacgtcgcaaaatggagattgacgac
ggaacttcagcttggggagatccgagcaaatacaactacaaaaatgtgaacatgtggaac
aaaaacgtcccaaatggcagcagccgttcagaccagcaagcacaggtacaccagttgcta
ccatctgcaagtgccatctcaaacaaagaggcaggcagtggctctggctggggtgagccc
tggggggagccttctactccagccacaactgtggataatggtacttcagcatggggtaaa
cccatagacagtggtcccagctggggggagcccattgctacggcatccaacacatccacg
tggggctccagctctgttggtcctcaagcattaagcaaatctgggccaaaatctatgcaa
gatggctggtgtggtgatgatatgccattgcctggaaatcgccccactggctgggaagag
gaagaggatgtagagattggaatgtggaatagtaattcatctcaagagcttaactcatct
ttaaattggccaccatatacaaagaaaatgtcatcgaagggtctgagtggcaaaaaaagg
agaagggaaaggggaaccatgaaaggtggaaacaaacaagaagaagcatggataaatcca
ttcgttaagcagttttcaaatatcagtttttcgagagactcaccagaagaaaatgtacag
agcaataagatggatctttccggaggaatgttacaggacaaacgaatggagatagataaa
catagcctaaatattggtgattacaatcgaacggtcgggaaaggccctggttctcggcct
cagatttccaaagagtcttccatggagcgcagcccttactttgataaggatggcattgta
gcagatgaatcccaaaacatgcagtttatgtccagtcaaagcatgaagcttcccccttca
aatagtgcactacctaaccaggcccttggctccatagcagggctgggtatgcaaaacttg
aattctgttagacagaatggcaatcccagtatgtttggtgttggaaacacagcagcacaa
ccccggggcatgcagcagcctccagcacaacctcttagttcatctcagcctaatctccgt
gctcaagtgcctcctccattactctcccctcaggttccagtttcattgctgaagtatgca
ccaaacaacggtggcctgaatccgctctttggccctcaacaggtagccatgctgaaccag
ctatcccaactaaaccagctttctcagatctcccagttacagcgattgttagcgcagcag
caaagggcccagagtcagagaagcgtgccttctgggaaccggcagcagcaagaccagcag
ggtcgacctcttagcgtgcaacagcagatgatgcagcagtcccggcaactcgatcccagc
ctgttggtgaagcagcagaccccgccatctcagcagcagccactccatcagccagccatg
aaatctttcctcgagaacgtcatgccccacactacacccgagctgcaaaaagggccgtca
ccaataaacgctttcagcagcttcccaataggcttgaactctaacttgaatgtaaatatg
gatatgaacagtattaaagagccacagtcaagattaaggaagtggactacagtggacagc
atttctgtgaacacatctttggatcaaaactccagcaaacatggtgctatttcaagtggt
ttcaggctggaagagtctccatttgttccctatgactttatgaacagcagtacttctcca
gccagccctccgggttcaataggagatggctggccacgtgccaaatcgcctaacggctct
agcagtgttaactggccaccagaatttcgccctggtgaaccatggaaaggttatccaaac
attgaccctgaaactgacccttacgtcactcctggcagtgtcataaacaatctttcaatt
aatactgtgcgggaagttgaccacctcagggacaggaacagtgggtcatcctcatccttg
aacaccacgctgccttcaactagtgcctggtcatccattcgtgcctccaactacaacgtt
cccctcagcagtacagcacaaagcacttcagccagaaatagtgattccaaattgacatgg
tctcctggttcagttacaaacacctctctggctcatgagctgtggaaggtccctttacca
cctaaaaacatcactgctccgtcccgcccacctccgggactgactggtcagaagccaccc
ttgtctacgtgggataactctccccttcgtgtaggtggaggatgggggaattctgacgcc
aggtacaccccaggttccagctggggtgagagcagctcagggagaataacaaattggctt
gttctaaagaaccttacacctcagatcgatggctcaactctgcgtactctgtgcatgcag
catggcccactgataacattccacctgaacctcccacatggaaatgctttggtccgttac
agttcaaaagaagaggtagtgaaggcacaaaagtctctgcacatgtgtgtattggggaac
actactattcttgctgagtttgccagtgaagaggagatcagccgtttctttgcacaaagt
cagtctctgaccccttctcccagctggcagtctctcgggtccagccagagccggctgggc
tccctcgactgttcccactcgttctccagccggaccgatctcaatcactggaatggtgct
gggctgtcgggaactcactgtggagaccttcacggcacttcactctgggggaccccacat
tattccacaagcctgtggggtcctcccagcagcagcgaccccaggggaattagcagccca
tcccccattaacgcttttctttctgttgaccacctgggtgggggtggagagtccatgtaa
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integrated database retrieval system
