Leptonychotes weddellii (Weddell seal): 102734013
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Entry
102734013 CDS
T08708
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102734013 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lww03019
]
102734013 (EXOSC7)
Messenger RNA biogenesis [BR:
lww03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102734013 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
102734013 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH_C
RNase_PH
Motif
Other DBs
NCBI-GeneID:
102734013
NCBI-ProteinID:
XP_006746704
UniProt:
A0A2U3YSJ4
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MARRHEAPRLPGLVQTRGGAQEKPIELPAVAAAAVAAGAAAAQADDARARGRGGAVGAGA
TRADDVRRAGRLGSMASVALSEAEKVYIVHGVQVATPRRQPPGFPWRCGWRRALASLGRR
RPGGVLGLPDSLSFSVASPCSSANATPEFEGRGGDDLGTEIANTLYRIFNNKSSVDLKSL
CISPREHCWILYVDVLLLECGGNLFDTICIAVKAALFNTRIPRVRVLEDEEGSKDIELSD
DPYDCIRLSVENVPCIVTLCKIGYRHVVDATLQEEACSLASLLVSVTSTGVVTCMRKVGK
GSLDPESIFEMMETGKRVGKVLHASLQSVLHKEESLGPKRQKVGFLG
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccggcacgaggcgccgcggcttcccggactcgtccagacacggggcggcgcg
caggagaagcccatcgagctgccggcggtggcggcagcggcggtggctgcaggagcggcc
gccgcgcaggctgatgacgcacgggcgcgtgggcgggggggcgcggtcggcgcgggggcg
acgcgagcagatgacgtacgacgagcggggcggctcggcagcatggcgtcggtggcgctg
agtgaggcggagaaggtgtatatcgtgcacggcgttcaggtagctacgccgcggcgtcag
ccaccgggtttcccctggcgctgcgggtggcggcgcgccctcgcttcgctcgggaggagg
cggccaggcggcgtgctgggtttacctgactcactcagcttttctgttgcctctccatgt
agttcggccaatgctacccctgaatttgaaggtcgaggaggtgatgaccttggcacggag
attgctaataccctctaccggatatttaacaacaagagcagcgtcgacctcaagtccctc
tgcattagtccccgggagcattgttggatcctctatgtggacgtgctgctgctggaatgc
ggtgggaacttgtttgacaccatctgcattgctgtgaaagctgctctcttcaacaccagg
ataccaagagttcgtgttctagaggatgaagaggggtccaaggacattgaactctcagat
gacccttatgactgcatccggctgagtgtggagaacgtcccctgcattgtcaccctgtgc
aagattggctatcggcatgtcgtggatgctactcttcaggaggaggcctgctccttggcc
agcttgctggtgtccgtgaccagcacgggagtcgtgacgtgcatgaggaaagtggggaag
ggcagcctggacccagagagcatctttgagatgatggagaccggcaagcgagtgggcaag
gtgctgcacgcctccctgcagagcgtcctacacaaggaggaaagcctggggcccaagaga
cagaaagtcggcttcctgggatga
DBGET
integrated database retrieval system