KEGG   Leptonychotes weddellii (Weddell seal): 102734191
Entry
102734191         CDS       T08708                                 
Symbol
SYMPK
Name
(RefSeq) symplekin
  KO
K06100  symplekin
Organism
lww  Leptonychotes weddellii (Weddell seal)
Pathway
lww03015  mRNA surveillance pathway
lww04530  Tight junction
Brite
KEGG Orthology (KO) [BR:lww00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102734191 (SYMPK)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    102734191 (SYMPK)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lww03021]
    102734191 (SYMPK)
   03019 Messenger RNA biogenesis [BR:lww03019]
    102734191 (SYMPK)
Transcription machinery [BR:lww03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     102734191 (SYMPK)
Messenger RNA biogenesis [BR:lww03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     102734191 (SYMPK)
    U7-dependent histone pre-mRNA processing factors
     102734191 (SYMPK)
SSDB
Motif
Pfam: Symplekin_C CRM1_C
Other DBs
NCBI-GeneID: 102734191
NCBI-ProteinID: XP_030889589
UniProt: A0A7F8R8P8
LinkDB
Position
Unknown
AA seq 819 aa
RSWSLFATSPSGVEQTKQCKEEPKEEKVVKPESVLIKRRLSAQGQAISVVGSLSSMSTLE
EEAPQAKRRPEPIIPVTQPRLAGAGGRKKIFRLSDVLKPLTDTQVEAMKLGAVKRILRAE
KAVACSGAAQVRIKILASLVTQFDSGLKAEVLSFILEDVRARLDLAFAWLYQEYNAYLAA
GASGTLDKYEDCLIRLLSGLQEKPDQKDGIFTKVVLEAPLITESALEVIRKYCEDESRTY
LGMSTLRDLIFKRPSRQFQYLHVLLDLSSHEKDKVRSQALLFIKRMYEKEQLREYVEKFA
LNYLQLLVHPNPPSVLFGADKDTEVAAPWTEETVKQCLYLYLALLPQNHKLIHELAAVYT
EAIADIKRTVLRVIEQPIRGMGMNSPELLLLVENCPKGAETLVTRCLHSLTDKVPPSPEL
VKRVRDLYHKRLPDVRFLIPVLNGLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEG
NSALSPLNPGELLIALHNIDSVKCDMKSIIKATNLCFAERNVYTSEVLAVVMQQLMEQSP
LPMLLMRTVIQSLTMYPRLGGFVMNILSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVI
LQLPPQQLGAVFDKCPELREPLLAHVRSFTPHQQAHIPNSIMTILEASGKQEPEAKEVPA
GPLEEDDLEPLALAPAPAPAPRPPQDLIGLRLAQEKALKRQLEEEQKLKPGGVGAPSSSS
SSSTRPGPPQPEETIDFREEGPECETPAIFISMDDDSGLTEAALLDSSLEGPLPKEAAGG
LTSKEERSPQTLTPAGEDTMKTPSPAAEESGEPESKGNS
NT seq 2460 nt   +upstreamnt  +downstreamnt
cgttcctggagcctatttgctacctccccctcaggtgtggagcagaccaaacagtgcaag
gaggagcccaaggaggagaaggtggtgaagccagagagtgtcctgatcaagcgacgcctg
tcagcccagggccaggccatctcagtggtgggctccctgagctccatgtctactctggag
gaggaggcgcctcaggccaagaggaggccagagcccatcatccctgtcacacagccccgg
ctagcgggcgctggtgggcgcaagaaaatcttccgcctgagcgatgtgctgaagcccctg
acggacacccaggtggaggctatgaagctgggcgccgtgaagcggatccttcgggcggag
aaggctgtggcctgcagcggggcagcccaggtgcgcataaagatcctggccagcctggtg
acgcagtttgactcgggcctgaaggcggaggtcctttccttcatcctggaggatgtgcgg
gcccgcctggacttggccttcgcctggctgtaccaggagtacaacgcctacctggcggcc
ggtgcctcgggcaccctggacaagtacgaggactgcctcatccgcctgctctccggcctg
caggagaagccagaccagaaggatgggatcttcactaaggttgtgctggaggcgccactg
atcaccgagagtgccctggaggtgattcgcaagtactgcgaggatgagagtcgcacttac
ctgggcatgtccactcttcgagacctgatcttcaagcgcccgtcccgccagttccagtat
ctgcatgttctgctagacctcagctcccacgagaaggacaaggtgcgttcccaggcccta
ctgttcatcaagcgcatgtatgagaaggagcagctgcgagagtatgtggagaaatttgcc
ctcaactacctgcaactcctggtccaccccaacccgccatccgtgctgtttggagccgac
aaggatacagaggtggcggcgccctggaccgaggagaccgtaaagcagtgtctgtacctc
tacctggctctcctgcctcagaaccacaagctcatccacgaactggcagccgtgtacacg
gaggccatcgccgacatcaagcggacggtgctgagggtcatcgaacagccgatccgagga
atgggcatgaactcaccggagctgctcctgctggtagaaaactgtcccaagggggcagag
acactggtcacacgatgtctgcacagcctcacggacaaagtcccgccctccccagagctg
gtgaagcgggtccgggatctctaccacaagcgattgccagatgtccgctttctcatccct
gtgctcaatggactggagaagaaagaagtgatccaggccctgccaaagctcatcaaactc
aaccccattgtggtgaaagaggtcttcaaccgcctgctgggcacccagcacggtgaaggg
aactcagccttgtccccgctgaaccctggagagcttctgatcgcactgcacaacatcgac
tcggtgaagtgtgacatgaagtccatcatcaaagccaccaacctgtgctttgcggagcgg
aacgtgtacacatcggaggtgctggccgtggtgatgcagcagctgatggagcagagcccc
ctgcccatgctgctcatgaggaccgtcatccagtctctgaccatgtacccccgcttgggg
ggtttcgtcatgaacatcctgtcccgcctcatcatgaagcaggtgtggaagtatcccaag
gtgtgggagggcttcatcaagtgctgtcaacgcaccaagccccagagtttccaggtcatc
ctgcagttgccaccccagcagctgggtgccgtctttgacaagtgcccagagctccgggag
cccctgctggcccacgtccgatccttcaccccccaccagcaagcacacatccccaactcc
atcatgaccatcctggaggccagtggcaagcaggagccagaggccaaggaagtacctgcc
gggcccctggaagaggacgacctggagcccttggccctggccccggccccagccccagcc
ccccggccccctcaggacctcatcggcctgcggctggcccaggagaaagccttaaagcgt
cagctagaggaggaacagaagctgaagccaggaggagtgggagccccctcgtcgtcgtcc
tcttcctccacccggccaggccctccccagcccgaagaaaccatagatttccgggaggag
gggcctgagtgtgagaccccggccatcttcatcagcatggatgacgactcggggctgacc
gaggccgcactcctggactctagtcttgaggggcccctacctaaggaggcagcgggcggg
ttgacctcaaaggaggagcgcagtccccagaccctcacccctgccggagaagacaccatg
aagacccccagcccggccgctgaggaatccggggaacccgagagcaaggggaacagctga

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