Leptonychotes weddellii (Weddell seal): 102735292
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Entry
102735292 CDS
T08708
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102735292 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lww03019
]
102735292 (DDX6)
03036 Chromosome and associated proteins [BR:
lww03036
]
102735292 (DDX6)
Enzymes [BR:
lww01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102735292 (DDX6)
Messenger RNA biogenesis [BR:
lww03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
102735292 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
102735292 (DDX6)
Chromosome and associated proteins [BR:
lww03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102735292 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
102735292
NCBI-ProteinID:
XP_030892947
UniProt:
A0A7F8RHN6
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTQTQQQMNQLKNTNTINNGTQQQAQ
SMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPS
PIQVCFPFSSTFFYFPAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIM
RLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKN
RQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFS
RLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVC
TDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIE
EQLGTEIKPIPSNIDKSLYVAEYHSEPVEDEKP
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagcacggccagaacagagaaccctgttataatgggtctatccagtcaaaatggtcag
ctgaggggccctgtgaagcccagtggtggccccggaggagggggcacacagacacagcaa
cagatgaaccagctgaaaaataccaacacaatcaataatggcactcagcagcaagcacag
agtatgaccaccactattaaacctggtgatgactggaaaaagactttaaaactccctcca
aaggatctaagaatcaaaacttcggatgtgacctccacaaaaggaaatgagtttgaagat
tattgtttgaaacgggagttactgatgggaatttttgaaatgggctgggaaaagccatct
cctattcaggtatgttttcccttttcatccacatttttctattttccagcaatggtgatt
gttcccactagagaacttgctctacaggtcagtcaaatttgcatccaggtcagcaagcac
atgggaggggccaaagtgatggcaaccacaggaggaaccaatttacgggatgacataatg
aggcttgatgacacagtgcacgtggtgatagctacccctggaagaatcctggatcttatc
aagaaaggagtagcaaaagttgatcatgtccagatgatagtattggatgaggcagataag
ttgctgtcacaggattttgtgcagataatggaggatattattctcacgctacctaaaaac
agacagattttattatattccgctactttccctcttagtgtacagaagttcatgaattcc
catttgcagaaaccctatgagattaacctgatggaggaactaactttgaagggagtaacc
cagtactacgcctatgtaactgagcgccaaaaagtacactgcctcaacacacttttctcc
aggcttcagataaaccagtcgatcattttctgtaactcctctcagcgagttgaattgcta
gccaagaagatttctcaactgggttattcttgcttctatatccatgctaaaatgaggcag
gaacatcgaaatcgtgtatttcatgatttccgaaatggcttatgccgcaatcttgtttgc
actgatttgtttacccgaggtattgatatacaagctgtgaatgtggtaattaactttgac
ttcccaaagctggcagagacctatctccatcgtattggaagatcaggtcgctttggtcat
cttggcttagccatcaacttgatcacatatgatgatcgcttcaacctgaaaagtattgag
gagcagctgggaacagagattaaaccgatcccaagcaacattgacaagagcctgtatgtg
gcagaataccacagcgagcctgtagaagacgagaaaccttaa
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