Leptonychotes weddellii (Weddell seal): 102735624
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Entry
102735624 CDS
T08708
Symbol
NRDE2
Name
(RefSeq) protein NRDE2 homolog
KO
K26109
nuclear exosome regulator NRDE2
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lww03019
]
102735624 (NRDE2)
Messenger RNA biogenesis [BR:
lww03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102735624 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_2
TPR_12
Motif
Other DBs
NCBI-GeneID:
102735624
NCBI-ProteinID:
XP_006748120
UniProt:
A0A2U3YWL0
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MALFPAFAGIGDAPNSGSARKELDWLSNPSFCVGAISSLSQQPEEAATLVSEGSPLTRSP
LKSEPSDESDANGKPKQTSRKKKKEKKKKRKRHHKKTKRKRGQAGSSGSEPDSEPEEDKT
SRSTGDSRRESEKPSQEGNAAADIGHRFVWLEDVQALTGETFRTDKKPDPANWEYKSLYR
GDIARYKRKGDSCLGINPKKQCISWERAAAEKKPSHKRVERYFTKKSVGLMNIDGVAVGS
KTEPPSSEPISFIPVKGSDDVVPPVTTWLNPLGIYDPSTTQWLQGQGPPEQESKQPDSQT
DRERALLKAKVEEFNRRVRENPHDIQLWMAFVAFQDEVVRSPGLYALEAGEQEKRKRSAK
LVLEKQLAVLERAIESNQSSVELQLARLKLCAEFWEPSALLREWQKLIFVHPNSTALWQK
YLLFCQSQFSTFTVSKIHGLYGKCLSTLSAVQDGSILSHPALPGTEEAVFALFLQHCHFL
RQAGHSEKAISLFQAMVDFTFFKPDSVKDLPTKGQVEFFEPFWDSGEPRAGEKGARGWRA
WMHQQERGGWVVISPDDDDDEPEDEDQEIRDKSLPRWQIWLAAERSRDQRHWQPWRPDKT
KKQTEEDCEDPERQVLFDDIAQSLIQLSSRDLQFQLVAAFLQFLGVPSGLSPLASCLYLA
MDEDSIFDNGLHDEKPLTFLDLSFSGVSCVGRSDPLGCHRWTRGHNREGEEFIRNIFHLV
MSLFSGQERSQLCFSWLRYEMAKVVWCLHTKNKKRLKSQGKNCKKLAKNLLKEPENRNNF
CLWKQYAHLEWLLGNTEDARKVFDTALSLAGGGEPRGCEPWELGLLYAGLELELELELSP
AARGAATARAVHILTRLTENGPYAPYSGPVSAVHVLKARKAYEHALQDCQGQSCGAGPPP
ADASHRLAGLLRCFMLFQYLTVGIEAAVRIYEQACAQLQGSVSPGGCGPDEPSCAQSPGR
GLEAVTLMHTSLLRFHARVSVCPVAPLRQALSDALRWYPGNQVLWRAYVQLQSKSHTASK
TRRFFDAITRSAKPLEPWLFAIEAEKTRKRLVETVQRVDGREVHATIPETGLTHRIEALF
ENALRSDNGSQCPLLWRMYLNFLVSLGNKERSKGVFYKALQNCPWAKTLYLDAVGHFPEE
MQEVLDLMTEKELRVRLPVEELELLLED
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcccggcctttgccggtattggtgacgctcccaacagcggcagcgccagg
aaagaattagattggctgagcaacccgagcttttgtgttggagccataagctctctgagc
caacaacctgaagaggctgccactctggtttctgaagggtcaccgctgacgaggagtcct
ctgaaatcagagccttcagatgaaagtgatgctaacggaaagcccaaacaaacaagcaga
aaaaagaagaaagagaagaagaagaagaggaaacgtcaccacaagaaaaccaagagaaaa
cgtgggcaggccggtagcagtggctccgagccggatagtgagcctgaagaggacaaaact
tccagaagcactggagacagtagaagggaatcggagaaaccaagtcaagaaggtaatgct
gccgctgatattgggcatcgctttgtttggcttgaggacgttcaggctctgactggagaa
accttcagaacagataagaaaccggatccggccaactgggagtataagtctctctaccga
ggagacatagcaagatacaagaggaaaggagactcctgccttggcattaaccctaagaag
cagtgtatatcctgggagagggctgccgcagaaaagaagccttcacacaagcgtgttgag
cgctatttcacgaagaagagcgtgggcttaatgaacattgacggagttgccgttggcagt
aaaaccgaacctccctcatctgagccgatctcgtttatccccgtgaagggctcggatgat
gtggttcctcccgttacgacctggttgaaccctctggggatttacgatccgtccaccacg
cagtggttacaaggacagggccctccagagcaagaatcaaagcagccagactcccagaca
gacagagagcgcgcgctgctcaaggccaaggtggaggagttcaacaggagagtgcgggag
aaccctcacgatattcagctgtggatggcgttcgttgcttttcaggacgaggtcgtgcgg
agccccggcctgtatgccctggaggcaggggagcaggagaagcggaagaggtctgcgaag
ctggtgctggagaagcagctggctgtcctggagcgggccatcgagagcaaccagagctcc
gtggagctgcagctggcccggctgaagctgtgcgccgagttctgggagccctcggcgctg
ctcagggagtggcagaaactgatctttgtacaccccaacagtacggccctctggcagaag
taccttttattttgccaaagccagttcagcaccttcaccgtgtcgaagatccacggtctt
tacggcaaatgcttgagcactctgtccgcggtgcaggacggcagcatcctgtcgcacccc
gccctgcccggcaccgaggaggccgtgttcgctctctttcttcagcactgtcacttcctg
cggcaggccggtcactcggagaaggcgatctcgctcttccaggccatggtggacttcacc
ttcttcaagccagacagcgtgaaagacctgcctaccaaaggacaggtggaattctttgag
cccttctgggacagtggggagccccgggctggggagaagggcgcccgaggctggagagcc
tggatgcaccagcaggagcgaggcggctgggtggtcatcagtccagatgatgatgatgac
gagccagaagacgaggaccaggaaataagagataagagtctgcccaggtggcagatctgg
ctcgccgctgagcggtcccgagaccagagacactggcagccgtggcgccctgataagacc
aagaagcaaaccgaagaagactgtgaggacccagagagacaggtgctgtttgatgacatt
gcgcagtctctgatccagctctccagccgggatcttcagtttcagctggtcgcggccttt
ctgcagttcctgggcgtgccttctggcctcagccccctggcctcctgcctctacctggcc
atggacgaggacagcatcttcgataacgggcttcacgatgaaaagccattgacttttctc
gacctgtccttttccggcgtcagctgtgttggccgttcagacccactgggctgccatcgc
tggacccgcgggcacaatcgagagggcgaggagttcatccgtaacatctttcaccttgtg
atgtctctgttttcaggccaggagaggtctcagctctgcttctcctggctacggtacgag
atggcgaaggtcgtttggtgtctgcacactaaaaacaagaagaggttaaagtcacaagga
aagaactgcaaaaaacttgccaaaaacctcctgaaggagccagaaaaccgcaacaacttt
tgcctctggaagcagtacgcacatctggagtggttgctcggcaacaccgaggacgccagg
aaggtgttcgacacggcgctcagcctggcggggggcggagagccgcggggctgcgagccc
tgggagctcggcctgctctacgcggggctggagctggagctggagctggagctgtcgccg
gccgcgagaggggccgccacggcccgagctgtccacatactgaccaggctgacggagaat
ggtccctacgcgccctactccgggccggtctcggctgttcacgttttgaaggcccggaag
gcttacgaacacgcgctgcaggactgtcaggggcagagctgtggcgctgggccgcctccc
gccgacgcctctcaccgcctcgccggcctgctcaggtgcttcatgctcttccagtacttg
accgtggggatcgaagccgctgtgcggatctacgagcaggcgtgtgcgcagctgcagggc
tccgtctccccgggcggctgtgggccggacgagcccagctgcgcgcagagcccgggccgc
ggcctcgaggccgtcacgctgatgcacacgagcctgctgcggttccacgcgagggtcagc
gtgtgccccgtggctcctctgcggcaggcgctctcggacgccttacggtggtaccccggc
aaccaggttctgtggcgggcctacgtacagcttcagagtaagtcccacacggccagtaag
accagaaggttcttcgatgccattaccaggtctgccaaacccttggagccgtggttgttt
gcgattgaagccgagaaaacgaggaagaggctggtggaaaccgttcagagggtggatggc
agagaggtccacgccacgattcccgagaccggcttgacgcatcggatcgaagccctgttt
gaaaatgctttgcggagcgacaacggcagccagtgccccttactgtggagaatgtatttg
aactttctggtctccttgggaaacaaagaaaggagcaaaggcgtgttctacaaagcactt
cagaattgtccttgggcaaagacgctgtacctggatgccgtgggccacttccctgaagag
atgcaggaggtcctggacctgatgacggagaaggagctccgggtgcgcctgcccgtggag
gagttggagcttctactcgaggactag
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