Leptonychotes weddellii (Weddell seal): 102735821
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Entry
102735821 CDS
T08708
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03082
ATP-dependent chromatin remodeling
lww03250
Viral life cycle - HIV-1
lww04714
Thermogenesis
lww05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102735821 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102735821 (SMARCB1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
102735821 (SMARCB1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102735821 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lww01009
]
102735821 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lww03021
]
102735821 (SMARCB1)
03036 Chromosome and associated proteins [BR:
lww03036
]
102735821 (SMARCB1)
Protein phosphatases and associated proteins [BR:
lww01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102735821 (SMARCB1)
Transcription machinery [BR:
lww03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102735821 (SMARCB1)
SWI/SNF complex
102735821 (SMARCB1)
Chromosome and associated proteins [BR:
lww03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102735821 (SMARCB1)
PBAF complex
102735821 (SMARCB1)
SWI/SNF complex
102735821 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
102735821
NCBI-ProteinID:
XP_030872937
UniProt:
A0A7F8PVG2
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MLIASGKLPPYVPRFSVQEIPLALEATSHCGREEENSCIVTWCAWGSLAELPNTRELSGL
WQWQLCAGPEDALQTLRGLRRERLPLPFGLDAAWRLADHGYTTLATSVTLLKASEVEEIL
DGNDEKYKAVSISTEPPTYLREQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDK
KRTFPLCFDDHDPAVIHENASQPEVLVPIRLDMEIDGQKLRDAFTWNMNDFLQRTHYLYS
DQNQTTTTKNPKKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQIESYPTDSILEDQS
DQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRGQ
LSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRRL
ANTAPAW
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgccagtgggaaactacctccgtatgttccgaggttctctgtacaagagata
cccctcgctctggaggcgactagccactgtggaagagaggaagaaaatagttgcatcgtc
acatggtgtgcctggggctcgctggctgaactgcccaacactcgagagctgagtgggctt
tggcagtggcagctctgcgcagggccagaagatgctctgcagacgcttcgagggctccga
cgggagcgtctccccttacctttcgggttggatgcggcgtggcgtttggcagatcacgga
tacacaaccttggccaccagcgtgacgctgttaaaagcctcagaggtggaagagattctg
gacggcaatgacgagaagtacaaggcggtgtccatcagcacggagccgcccacctacctc
agggaacagaaagccaagaggaacagccagtgggtgcccaccctgcccaacagctcccac
catctggacgctgtgccctgctccacgaccatcaacaggaaccgcatgggccgggacaag
aagagaaccttccctctgtgctttgatgaccacgacccagctgtgatccatgagaatgca
tcccagcctgaggtgcttgtccccatccggctggacatggagatcgacgggcagaagctt
cgagatgcctttacttggaacatgaatgactttttgcaacgaacacattatttatattca
gaccaaaaccaaacaacaacaacgaaaaaccccaagaagctgatgacccctgagatgttt
tcagaaatcctctgtgatgacctggatttgaacccactgacatttgtcccagccatcgcc
tctgccatcagacagcagatagagtcctatcccacggacagcatcctggaggaccagtca
gaccagcgtgtcatcattaagctgaacatccacgtgggaaacatttcgctggtggaccag
tttgagtgggacatgtcagagaaggagaactcaccagagaaatttgccctgaagctgtgc
tcagagctggggctgggcggggagttcgtcaccaccattgcatacagcatccggggacag
ctgagctggcatcagaagacctatgcattcagtgagaaccccctacccacggtggagatt
gccatccggaacacaggtgatgctgaccagtggtgcccgctgctggagactctgacggac
gccgagatggaaaagaagatccgcgaccaggacaggaacacaaggcgtatgaggcgtctt
gccaacactgccccagcctggtaa
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