Leptonychotes weddellii (Weddell seal): 102735880
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Entry
102735880 CDS
T08708
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lww03009
]
102735880 (DDX55)
Enzymes [BR:
lww01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102735880 (DDX55)
Ribosome biogenesis [BR:
lww03009
]
Eukaryotic type
Pre-60S particles
Helicases
102735880 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
AAA_22
Motif
Other DBs
NCBI-GeneID:
102735880
NCBI-ProteinID:
XP_006740472
UniProt:
A0A2U3Y9R9
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MEHVTEGSWESLPIPLHPLVLGALRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKNQVGAIIITPTRELAIQIDEVLAHFTKPFPQFSQILWIGG
RNPGEDVARFKEQGGNIVVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLENYYMVCKADEKFNQLVHFLRNHKQEKHLIFFSTCACVEYYGKALEALVKSVKIMCIH
GKMKHKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTA
RIGHGGSALVFLLPMEESYISFLEINQKCPLQEMRLQKNTGDLLPKLKSMALADRAVFEK
GMKAFVSYVQAYAKHECNLIFRLKDLDFARLARGFALLRMPKMPELRGRQFPDFAPADVN
TDTIPFKDKVREKQRQKLLEQQRKEKRENEGRKKFIKNKAWSKQKAKKEKKKKMNEKRKR
EEGCDIEDEDMEELLNDTRLLKKFKKGKITEEEFEKGLFSSGKRTVPTADLGIPDSEEDC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacggagggctcctgggagtcgctgccgattccgctgcacccgctggtg
ctgggtgcgctgcgggagctgggcttcccgtacatgacgccggtgcagtctgcaaccatc
cccctgttcatgaaaaacaaagatgtcgctgcagaggcggtcacaggtagtggcaaaacg
ctcgcttttgtcatccccatcctggaaattcttctgagaagggaagagaagttaaaaaag
aatcaggttggggcgatcatcatcacacccacacgggagctggctattcaaatagatgaa
gtcctggcacatttcacgaagcccttcccacagttcagccagattctctggatcggaggc
aggaatcctggagaagatgttgcaaggtttaaggaacaaggtgggaacatcgttgtggcc
actccaggccgcctggaggacatgtttcggaggaaggcggagggcttggatctggccagc
tgtgtgaggtccctcgacgtcctggtgttggacgaagcagacagacttctggacatgggg
tttgaggcaagcataaacaccatcctggagtttttgccaaagcagaggagaacaggcctt
ttctctgccactcagacgcaggaagtggagagcctggtgcgagcggggctccggaaccct
gtacggatttcggtgaaggagaagggcgtagcggccagcagcactcagaaaactccttcc
cgcctggagaactactacatggtatgtaaggcagatgagaaatttaaccagctggtacat
tttcttcgaaatcataagcaggaaaagcacctgatcttcttcagcacctgcgcctgtgtg
gaatactatggaaaggctctggaggccctggtgaagagtgtgaagatcatgtgcattcat
gggaagatgaaacacaagcgcaataaaatcttcatggagttccgcaaactgcaaagtggg
attttagtgtgcacggatgtcatggcccgaggaatagacattcctgaagtaaactgggtt
ttgcagtacgaccctcccagcagtgcaagtgccttcgtacatcgctgtggtcgtacagcc
cgcatcggccacggcggcagcgcgctcgtcttcctccttcccatggaagagtcctatatc
agtttccttgaaattaaccaaaaatgccccctgcaggagatgagactccagaaaaacaca
ggagacctccttccaaagctcaagtccatggccttggccgacagagctgtgtttgaaaag
ggcatgaaagcctttgtgtcctacgtccaggcttatgcgaagcacgaatgcaacctcatc
ttcagattaaaggatcttgattttgctcgacttgctcgagggtttgccctgctaaggatg
ccaaagatgccggagctgaggggaaggcagtttccagatttcgcgcctgcggatgttaac
acagacaccatcccatttaaagataaagttagagagaagcagaggcagaaactcctggag
caacaaagaaaagagaaaagagaaaatgaagggagaaaaaaattcataaaaaataaagct
tggtcaaagcagaaggccaaaaaggagaagaagaaaaagatgaatgaaaaaaggaagagg
gaagagggttgtgatattgaagacgaggacatggaggaacttctcaatgacacgaggctc
ttgaaaaagtttaagaaagggaaaattactgaagaagaatttgagaaggggttgttttcg
agtggcaagagaacagtcccaacagcagatctggggatccctgattcggaagaggactgc
tga
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