Leptonychotes weddellii (Weddell seal): 102736133 Help Entry 102736133         CDS       T08708                                  Symbol COL1A2 Name (RefSeq) collagen alpha-2(I) chain   KO K06236   collagen type I alpha Organism lww  Leptonychotes weddellii (Weddell seal) Pathway lww04151   PI3K-Akt signaling pathway lww04510   Focal adhesion lww04512   ECM-receptor interaction lww04611   Platelet activation lww04820   Cytoskeleton in muscle cells lww04926   Relaxin signaling pathway lww04933   AGE-RAGE signaling pathway in diabetic complications lww04974   Protein digestion and absorption lww05146   Amoebiasis lww05165   Human papillomavirus infection lww05205   Proteoglycans in cancer lww05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:lww00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     102736133 (COL1A2)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102736133 (COL1A2)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102736133 (COL1A2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102736133 (COL1A2)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     102736133 (COL1A2)   09152 Endocrine system    04926 Relaxin signaling pathway     102736133 (COL1A2)   09154 Digestive system    04974 Protein digestion and absorption     102736133 (COL1A2)  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     102736133 (COL1A2)   09172 Infectious disease: viral    05165 Human papillomavirus infection     102736133 (COL1A2)   09174 Infectious disease: parasitic    05146 Amoebiasis     102736133 (COL1A2)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     102736133 (COL1A2)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     102736133 (COL1A2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:lww00536]     102736133 (COL1A2) Glycosaminoglycan binding proteins [BR:lww00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102736133 (COL1A2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  102736133 NCBI-ProteinID:  XP_006730730 UniProt:  A0A2U3XGW4 LinkDB All DBs Position Unknown AA seq 1365 aa AA seqDB search MLSFVDTRTLLLLAVTSCLATCQSLQEATARKGPAGDRGPRGERGPPGPPGRDGDDGIPG PPGPPGPPGPPGLGGNFAAQYDPGKGVGPGPMGLMGPRGPPGASGAPGPQGFQGPAGEPG EPGQTGPVGSRGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRG HNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVG PVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEVGLPGVSGPVGPPGNPG ANGLAGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKG EPGSAGPQGPPGPSGEEGKRGPNGEAGSTGPSGPPGLRGGPGSRGLPGADGRAGVMGPPG PRGATGPAGVRGPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGPIG PSGARGEPGNIGFPGPKGPAGDPGKAGEKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQG GKGEQGPAGPPGFQGLPGPAGTAGEAGKPGERGLPGEFGLPGPAGTRGERGPPGESGAAG PSGPIGSRGPSGPPGSDGNKGEPGVLGAPGTAGPSGPGGLPGERGAAGTPGGKGEKGETG LRGEVGNPGRDGARGAPGAVGAPGPAGATGDRGEAGPAGPAGPTGPRGSPGERGEVGPAG PNGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPTGPVGSAGPSGPNGPPGPAGSRGDGG PPGATGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGLRGPRGDQGPVGRTGETGAHGPPG FTGEKGPSGEPGTAGPPGTAGPQGLLGAPGILGLPGSRGERGLPGVSGSVGEHGPLGIAG PPGARGPPGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPAGAVG APGPHGPVGPTGKHGNRGEPGPAGSVGPVGAAGPRGPSGPQGVRGDKGEPGDKGPRGLPG LKGHNGLQGLPGLAGQHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGVRG SQGSQGPAGPPGPPGPPGPPGPSGGGYDFGYEGDFYRADQPRSPPSLRPKDYEVDATLKS LNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTGE TCIRAQPENIPAKNWYRNSKVKKHIWLGETINGGTQFEYNAEGVTTKEMATQLAFMRLLA NHASQNITYHCKNSIAYLDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKKT NEWRKTIIEYKTNKASRLPILDIAPLDIGDADQEFRVDVGPVCFK NT seq 4098 nt NT seq  +upstreamnt  +downstreamnt atgctcagctttgtggatacgcggactttgttgctgcttgcagtaacgtcgtgcctagca acatgccaatctttacaagaggcaactgcaagaaagggcccagctggagatagaggacca cgtggagaaaggggtccaccaggcccaccaggcagagatggtgacgatggtatcccaggc cctcctggtccacctggtcctcctggcccccctggtcttggcgggaattttgcggctcag tatgatcctggaaaaggagttggccctggaccaatgggtttgatgggacctcgagggcca cctggtgcgtctggagctcctggccctcaaggtttccaaggacctgctggtgagcccggt gaacctggtcaaactggtcctgtgggttctcgtggtccacctgggcctcctggcaaggct ggggaggatggtcaccctggaaaacctggacgacctggtgagagaggagttgttggacca cagggtgctcgtggtttccctgggactcctggacttcctggcttcaagggcattagggga cacaatggtctggatggattgaagggacagcccggagctccaggtgtgaagggtgaaccc ggtgcccctggtgaaaatggaactccaggtcaaacaggagcccgtgggcttcctggtgag agaggacgcgtcggtgcccctggtccagctggtgcccgtggaagtgatggaagtgtgggt cctgtgggtcctgctggtcccattgggtctgctggccctccaggctttccaggtgctcct ggccccaagggtgaactcggacctgttggcaaccctggtcctgctggtcccgcgggtccc cgcggtgaagtaggtcttccgggtgtctccggccccgttggacctcctggtaaccctgga gccaacggcctggctggtgctaagggtgctgctggcctgcccggtgtggctggggctccc ggcctccctggaccccgcggaattcccggccctgttggcgctgctggtgctactggggcc agaggactcgtcggtgagcctggtccagctggttccaaaggagagagcggcaacaagggt gagcccggctctgctgggccccaaggtcctcccggtcccagtggtgaagaaggaaagaga ggccccaacggtgaagccggatccactggcccctctggacctcctgggctgagaggaggt cctggttctcgtggtcttcctggagctgacggcagagctggtgtcatgggccctcctggc cctcgtggtgcgaccggccctgctggtgtccgaggtcccaacggagattctggtcgccct ggagagcctggcctcatggggccccgaggttttcctggtgcccctggaaatgttggccca gctggtaaagaaggtcccatgggcctccctggtattgacggcaggcctggtccgattggc ccatctggagcaagaggagagcctggcaacatcggattccctggacccaaaggccccgcc ggtgatcctggcaaagctggtgagaaaggtcatgctggtcttgctggtgctcggggtgct ccaggtcctgatggaaacaatggtgctcaggggcctccaggaccacagggtgtccaaggt ggaaaaggtgaacaaggtcccgctggtcctccaggcttccagggtctgcctggccccgca ggtacagctggtgaagctggcaaaccaggagaaaggggtctccctggtgaatttggtctc cctggtcctgctggtacaagaggggagcgtgggccccctggagaaagtggtgctgctggt ccttctggtcctattgggagccgaggtccttctggaccccctgggtccgatggaaacaag ggtgaacctggtgtgctcggtgctccgggcaccgcgggtccatcgggtcccggcggcctc ccaggagagcggggtgctgctggcacacctggaggcaagggcgagaagggtgaaactggt ctccgaggggaagttggtaacccaggcagagatggtgcccgtggtgcccctggtgctgtg ggtgcccccggtcctgctggagccactggtgaccggggtgaagccggtcctgccggtcct gccggtcctaccggtcctcgtggtagccctggtgaacgtggtgaggttggtcccgctggc cccaatggatttgctggtcctgctggtgctgctggtcaacctggtgctaaaggagagaga ggaaccaaagggcccaagggtgaaaatggtcccgtcggtcccacaggccccgtcggatct gctggcccatctggtccaaatggtccccctggtcctgctggaagtcgtggtgatggcggc ccccctggtgctactggttttcctggcgctgctggacggactggtcctcctgggccctct ggtatcaccggccctcctggtccccctggcgctgctggtaaagaaggactccgtgggcct cggggtgaccaaggtccagttggccgaacaggagaaactggtgcacatggtccccccggc tttaccggcgagaagggtccctctggagagcccggtaccgctggccctcctggcaccgca ggtcctcaaggtctccttggtgctcctggcattctgggtctcccaggctctcgaggtgaa cgtggtctaccaggtgtttctggatctgtgggtgaacacggacctctcggcatcgctggc ccacctggggctcgtgggccccctggggctgtgggtgcaccgggagtgaacggcgctcct ggcgaagctggtcgtgatggcaaccctgggaacgatggccccccaggccgcgatggtcaa cctggacacaagggagagcgcggttaccctggcaacattggtcctgctggcgctgtgggc gcacctggtcctcacggccctgtgggtcccactggcaaacacggaaaccgtggtgaaccc ggtcctgctggttctgtgggtccagttggtgctgctggtccaagaggtcctagtggccca caaggtgttcgaggtgataagggagagcctggtgacaaggggcccagaggtcttcctggc ttaaagggacacaatggactgcaaggtcttcctggtctcgctggtcaacatggcgatcaa ggtgcacctggttctgtggggcctgccggtcctaggggccctgctggtccttccggccct gctggcaaggacggtcgcactggacatcccggtacagtcggccctgctggcgtccgtggc tctcaggggagccaaggtcctgctggccctcccggtccgcctggtcctcctggccctccc ggcccgagtggtggtggctatgactttggttacgaaggggacttctacagggctgaccag cctcgctcaccaccttctctcagacccaaggattatgaagttgatgctactctgaaatcc ctcaacaaccagatcgagacccttcttactcctgaaggctctaggaagaacccagctcgc acatgccgtgacttgagactcagccacccagagtggagcagcggttactactggattgac cctaaccaaggatgcactatggatgctatcaaagtatactgtgatttctctactggcgaa acctgcatccgggctcaacctgaaaacatcccagccaagaactggtacagaaattccaag gtcaagaagcacatctggttaggagaaactatcaatggtggtacccagtttgaatataat gctgaaggagtgaccaccaaggaaatggccactcaactcgccttcatgcgcctgctggcc aaccatgcctctcaaaacatcacctaccactgcaagaacagcattgcctacctggatgag gagactggcaacctgaagaaggctgtcattctgcaaggctccaatgatgttgaactggtt gccgagggcaacagcaggttcacctacactgttcttgtagacggctgctctaaaaagacg aatgaatggagaaagacaatcattgaatacaaaacaaataaggcatcccgcctgcctatc cttgatattgcacctttggacatcggtgatgctgaccaagaattcagggtggacgttggc ccagtctgtttcaaataa

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