Leptonychotes weddellii (Weddell seal): 102736644
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Entry
102736644 CDS
T08708
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03440
Homologous recombination
lww03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102736644 (PALB2)
03460 Fanconi anemia pathway
102736644 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lww03400
]
102736644 (PALB2)
DNA repair and recombination proteins [BR:
lww03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
102736644 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
102736644 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
102736644
NCBI-ProteinID:
XP_006730873
UniProt:
A0A2U3XHR6
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MEEPPGKPLSCEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKVKNSIKKTVEEHDCLLQ
QEISPQLNHSEPKNKVSPCDTLQISTHLDKETGEKTPITLDIEPESFNPRHGPVEELHIQ
RTGDIQEHFPYQVSGSEKRQSKLPGRRKKQQKRTYTAQVRESFFDADSLILSGKRLKEQE
EINGENPRTPVNERTYFSSSTSDIPGSPAPVTETNARDVLIPPTAKPQRGVDALVRGKNF
PRMPTLASFTLSNSSSGTHLEHKPPKGDCELTTHNLKNINPALPVNLEAQGRKMTVCTDN
PEVNKAVSASDQLPRSPDLEADNSYSINKFTYDNLSANENQNLKGQNHTEKSLTSPHNTL
DGRNESLQENEVVSQSKSLSPEVISPASAENQTHSCTMLEGLLFPAEYYVRTTRRMSNCQ
RKVALEAVIQSHLGVRKKGFKNKSKEATKNLNLCSEETGQSEIRTSDTCTGQPSSRRPQK
GLLLTEVNSPTGPTKDNLPRKAVTQPSGRRHGGKRKSISLPVLDHHELLLPVPGTAGVNR
SKEEVTLHKDQNEKAISHGKKRIKGKEDHCQKEDSLPSRNNAYLALDSAAFRASFQENEL
LSLKQLSSFLKTTDFQLPDEVFGPLKLEKLKSCSEKPVEPFVSSMYGRMHLKEGNCSVWE
ELTPQQIDIEMEDLEEEILVLPGKAQPKTSNLTSQSQKKGLPSSILLFTPLNTGAPEDNN
RPTADVCSPAFPTLGATPAFGSQAHCEKVCAEAVGPTCSTPQLPHLKDSDGKQRNSWASP
SKSDCSLVASGREGQPSCDCDSGPQATPLPPESVPLKDSQLCGNPHPESWKQSTEQTEVT
DLPAYDSLNPGHLQLVSKLKNPSGSCSVDVSAMWWEIAGFKEPCIITACEYVVSLWKLLN
TWQWEKLHSWHFTEVPVLQIVPVPDVCNLVCVALGNLEIREIRALLCSSDGKREKQVLLS
SGNIKAVLGLTERRLVSSSGTLCDQQVEIMTFAEDGGSKEKQFLMSPEETVLTFAEVQGM
QEALLGTTMMNNIVIWNLKTGQLLKKMHIGDSYQASVCHKAYSEMGLLFVVLSHPCAKES
EPLGSPVFQLIVINPKTSLSVGVMLYGLPQGQAGRFLEGDVKDHFAVAVLTSGTIAIWDL
LLGHCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYRC
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcctcccgggaagcccctcagctgtgaggagaaggaaaagttgaaggaaaaa
ttagcattcttgaaaagggaatacagcaagacactggcccgccttcagcgtgcccaaaga
gctgagaaggttaagaattctattaaaaaaacagtggaagaacatgattgcttgctccag
caggaaatttcaccacagctaaaccactcagaacctaaaaataaagtatctccttgtgac
acattacaaatcagcacccatctggataaagaaactggagaaaagacacctatcacactt
gacattgagcctgagtcctttaaccctagacatggccctgtggaggaattacatatacaa
agaacaggtgatatccaagaacattttccctaccaggtcagtggctctgagaaaaggcag
agtaagctgccagggagaagaaaaaagcagcagaagagaacatacactgcacaggtgaga
gaatctttctttgacgcggattcactcatactctctggaaaaagactaaaggaacaggag
gaaatcaatggagaaaatcctaggacacctgtaaatgaaagaacttatttttcaagttct
acgtctgacatccctggttctccagcaccagtgacagaaactaatgcaagagatgtatta
attccaccaactgccaaaccacaaagaggtgtcgatgcacttgtaagaggaaagaatttc
cccaggatgcctacacttgcttcatttactctgtcaaatagcagtagtggtacgcacctt
gaacataagcctcctaaaggtgactgtgaactcactactcacaatctgaaaaacattaac
cctgctttacctgtaaacctagaggcacaaggcagaaaaatgacggtctgtacagataac
ccagaggtaaacaaagctgtaagtgcaagtgaccagctgcctagaagtcctgacttagag
gcagataattcatactctataaataaattcacttatgataacttatcagccaatgaaaac
caaaacttaaaaggacagaatcacacagagaagtctttaacatctccccataacactctt
gatggtagaaatgaaagtcttcaggaaaatgaggttgtaagtcagtctaagagtcttagc
ccagaagtaatctctcctgcttctgcagaaaatcaaacacattcttgtacaatgctcgaa
ggccttctatttcccgcagaatattatgttagaacgacacgacgcatgtcaaattgccag
aggaaagtagccctggaggctgtaattcaaagtcatttgggtgtcagaaagaaagggttt
aaaaataaaagtaaggaagcaactaaaaatttaaacctttgcagtgaggaaactggccag
agtgaaattagaacatctgacacatgcacaggacaaccaagttcaagaagacctcagaaa
ggtctcttgttaactgaagtcaactctcccactgggcccactaaagataaccttcccagg
aaggcagttacccagccatctggtagaagacacggaggaaaaagaaagtcaatctccctg
cctgtactggatcatcatgaactacttttgccagttcctggcacagcaggtgttaataga
tccaaggaagaagtcaccttacacaaagatcagaatgaaaaagcaattagtcatggtaag
aagagaattaaagggaaggaagatcattgtcaaaaagaggactcccttccttccagaaat
aatgcttatctagctttggattctgctgcgttcagggcttcatttcaggagaatgaattg
ctaagtttaaagcaactgtcatcttttctcaaaaccacagactttcagttacctgatgaa
gtctttggacctcttaagcttgaaaaactgaagtcctgttcagaaaaaccagttgagcct
tttgtatcaagcatgtatgggcggatgcaccttaaggagggaaactgtagcgtttgggaa
gaactgactcctcaacaaatcgatattgaaatggaggacttggaagaggaaattcttgtt
ctcccgggaaaagcacaacctaaaacatcaaacctaacaagccagtctcagaagaagggc
cttccttcatccatattacttttcacgcctttaaatactggtgcgcccgaggataataac
aggcccacagcagatgtgtgctcgcctgctttccccaccttaggcgctactccggctttt
ggctctcaagcacactgtgaaaaagtgtgtgcagaggctgtcgggccaacttgctctaca
ccccaacttcctcacttaaaagacagtgatgggaaacaacgcaacagttgggctagccca
tcaaaatcagattgcagccttgttgcgtcagggagggaaggacagccttcctgtgactgt
gattctggcccccaggcaacacctcttccccctgagtcagtccctctcaaagacagtcag
ctgtgtggaaatccacacccggagtcgtggaaacagtccaccgaacagactgaagtaacc
gaccttcctgcttatgatagcttaaacccaggccaccttcaattggtttcaaagttaaag
aatccttctggttcctgttcggtggatgtgagtgccatgtggtgggaaatagcaggtttc
aaagagccatgtatcataactgcctgtgaatacgtagtttctctttggaaacttctcaat
acttggcagtgggaaaaacttcattcctggcacttcacagaggttccagtattacagata
gttccagtgcctgatgtttgtaatcttgtgtgtgtggctttgggaaatttggaaatcaga
gaaatcagggcattactttgttcctctgatggtaaacgtgaaaagcaagtactactgagt
tctggaaatataaaagctgtgcttggcctgacagagaggaggctagttagtagcagtggt
accctttgtgaccaacaagtggaaatcatgacatttgcagaagatggaggaagcaaagaa
aaacaatttttgatgtcccctgaagagactgtactaacttttgccgaggtccaagggatg
caggaagctctgcttggtaccactatgatgaacaacattgttatttggaatttaaaaact
ggacagctcctgaaaaagatgcacattggtgattcctaccaagcttcagtctgtcacaaa
gcctattctgaaatggggctcctgtttgttgttctgagccatccttgtgccaaagagagt
gaaccgctgggaagccctgtatttcagctgatcgtgattaatcctaagacaagcctgagc
gtgggtgtgatgctctacggtcttcctcaagggcaggctggaaggttcctggaaggagac
gtgaaagatcattttgcggttgcagtactaacttctggaacgattgccatttgggactta
cttctaggtcattgtactgctctcctcccacctgtctctgaccagcattggtcttttgtt
aaatggtcaggtacagattctcatttgctggctggacaaaaagatggaaatatatttgta
taccgctgctaa
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integrated database retrieval system
