Leptonychotes weddellii (Weddell seal): 102737222
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Entry
102737222 CDS
T08708
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04611
Platelet activation
lww04820
Cytoskeleton in muscle cells
lww04926
Relaxin signaling pathway
lww04933
AGE-RAGE signaling pathway in diabetic complications
lww04974
Protein digestion and absorption
lww05146
Amoebiasis
lww05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102737222 (COL3A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
102737222 (COL3A1)
09152 Endocrine system
04926 Relaxin signaling pathway
102737222 (COL3A1)
09154 Digestive system
04974 Protein digestion and absorption
102737222 (COL3A1)
09160 Human Diseases
09174 Infectious disease: parasitic
05146 Amoebiasis
102737222 (COL3A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
102737222 (COL3A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102737222 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lww00536
]
102737222 (COL3A1)
Glycosaminoglycan binding proteins [BR:
lww00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102737222 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COLFI
Collagen
Motif
Other DBs
NCBI-GeneID:
102737222
NCBI-ProteinID:
XP_030889025
UniProt:
A0A7F8R6K5
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MRYLKPWKWLRSSRERLKTENIKAANDKKQGPSGERGGPGPAGPRGAPGEPGRDGVPGGP
GMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKN
GERGGPGGPGPQGPAGKNGETGPQGPPGPTGPGGDKGDPGPPGPQGLQGLPGTSGPPGEN
GKPGEPGPKGESGSPGTPGGKGDSGAPGERGPPGAVGPAGPRGGAGPPGPEGGKGAAGPP
GPPGSAGTPGLQGMPGERGGPGGLGPKGDKGEPGSAGVDGAPGKDGPRGPTGPIGPPGPA
GQPGDKGEGGAPGLPGIAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGAKGERGAPGEK
GEGGPPGIAGPPGGAGPAGPPGPQGVKGERGSPGGPGSAGFPGARGLPGPPGNNGNPGPP
GPSGAPGKDGATGPPGNNGAPGNPGVSGPKGDAGQPGEKGSPGSQGPPGPPGPLGSVGIT
GARGLAGPPGIPGPRGSPGPQGVKGESGKPGAAGHNGERGPPGPQGLPGLAGTAGEPGRD
GNPGSDGLPGRDGAPGGKGDRGENGSPGAPGAPGHPGPPGPIGPAGKSGDRGETGPAGPS
GAPGPAGSRGPPGPQGPRGDKGETGERGSSGIKGHRGFPGNPGAPGSPGPAGHQGAVGSP
GPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAP
GPCCGGGAAAMGSLGGAEKAGGFAPYYGDEPMDFKINTEEIMTSLKSVNGQLESLLSPDG
SRKHPARNCRDLKFCHPELKSGEYWVDPNQGCKLDAIKVFCNMETGETCINASPWTVPRK
NWWTDSSAEKKNVWFGESMDGGFQFSYGNPELPEDVLDVQLAFLRLLSSRASQNITYHCK
NSIAYMDHASGNVKKALRLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWGKTVFEYRT
RKAVRLPIVDIAPYDIGGPDQEFGVDIGPVCFL
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcgctatttgaagccatggaagtggctgagatcatctagggaaagattaaagactgaa
aatataaaggcggctaatgacaaaaagcaaggtccctctggggagcgtggtggtcccggc
cccgcagggcccagaggagctcctggagaacctggccgagatggtgtccctggaggtcca
ggaatgaggggtatgcccggaagcccaggagggccaggcagcgatggaaaaccagggcct
cccggaagtcaaggagaaagtggtcgaccaggtcctccaggcccatctggtccccgaggt
cagcctggtgtcatgggtttccctggtcctaaaggaaatgatggtgcacctggcaagaat
ggagaacgaggtggccctggaggtcctggccctcagggtcctgctggaaagaatggtgaa
actggacctcagggtcccccaggacctactgggccaggtggtgacaaaggagatccagga
ccccctggtccacaaggattgcaaggtttgcctggaaccagtggacctccaggagaaaat
ggaaaacctggtgaaccaggtccaaagggtgaatctggttcacctggaactccaggaggc
aagggtgattcgggagccccgggtgaacgaggacctcccggagctgtggggcccgcggga
ccgagaggtggagccggcccccctggtcccgaaggaggaaagggcgctgctggaccccct
gggccacctgggtctgctgggactcctggtctgcaagggatgcctggggaaagaggaggt
cctggaggtctcgggccaaagggtgacaagggcgaaccaggcagcgcaggggtggatggt
gctccagggaaagacgggccgcggggtcctactggtcccattggtccccctggcccagct
ggtcagcctggagataagggtgaaggtggtgcccctggacttccgggtatagctggtcct
cgtggtggccctggtgagagaggcgaacacgggcctccaggacctgctggcttccctggt
gctcctggacagaatggtgagcctggtgctaaaggagaaagaggtgctcctggtgagaaa
ggtgaaggagggccccctggcatcgcaggaccccctgggggtgctgggcctgctggtccc
cctggtccccagggcgtcaaaggtgaacgcggcagtcctggtggtcctggttctgctggc
ttccctggtgctcgtggtcttcctggtcctcctggtaataatggtaacccaggccccccg
ggccccagcggtgctccaggcaaggacggggccaccggtccacctggtaacaatggtgct
cccggcaaccctggagtgtctggacctaaaggtgatgctggccaacccggcgagaaggga
tcccccggctcccagggccccccgggacctccaggcccactgggaagtgtcgggattacc
ggagccaggggtctcgcgggaccaccgggcatcccgggtcctaggggaagcccaggccca
cagggtgtcaagggtgaaagtgggaaaccaggagctgctggtcacaatggagaacgcggt
cctcctggaccccagggtcttcctggtctggctggtacagctggtgaacctggaagagac
ggaaacccaggatcggatggtcttccaggccgagatggagctcccggtggcaagggtgat
cgtggagaaaatggttcccctggtgcccccggtgctcctggtcatccaggcccccctggt
cccattggtccagctggaaagagtggtgacagaggagaaactggccccgctggcccttct
ggtgctccgggtcctgctggttcccgaggtcctcctggtccccaaggtccacgtggtgac
aaaggtgaaacaggtgaacgtggttctagtggcatcaaaggacatcgaggattccctggt
aatccaggtgctccgggttctccaggtcctgctggtcaccaaggtgccgttggtagccca
ggacctgcaggcccgcgaggacctgttggacccagtgggcccccaggcaaagatggcacg
agcggacatccgggtcccattggaccgccagggcctcgagggaacagaggtgaaagaggg
tctgagggctccccaggccacccaggacaaccgggccctcctggacctcctggtgctcct
ggtccgtgctgtggtgggggcgctgctgccatgggttctctcggaggggctgaaaaagct
ggtggttttgccccatattatggagatgaaccgatggatttcaaaatcaacaccgaggag
attatgacttcactcaaatcggtcaacggacaactagaaagcctcctcagtcctgatggg
tcccgtaaacaccctgctcggaactgccgagacctgaaattttgccatcctgaactcaag
agcggagaatattgggttgaccctaaccaaggttgcaagttggacgctattaaagtattt
tgcaatatggaaactggggaaacgtgcataaatgccagtccttggactgttccacgtaag
aactggtggacagattctagtgctgagaagaaaaatgtttggtttggagaatctatggat
ggtggttttcagtttagctatggcaatcctgaacttcctgaagatgtcctcgatgtccag
ctggccttcctccgacttctctccagccgggcctcccagaacatcacgtatcactgcaag
aatagcattgcatacatggatcatgccagtgggaatgtaaagaaagccttgaggctgatg
ggctcaaatgaaggtgaattcaaggctgaaggaaatagcaaattcacatacacagtcctg
gaggatggttgcactaaacacactggggaatggggcaaaacagtcttcgaatatcgaacg
cgcaaggccgtgagactacctattgtagatattgcaccctatgatattggtggtcctgat
caagaatttggtgtggacattggccctgtttgctttttataa
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