Leptonychotes weddellii (Weddell seal): 102737805
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Entry
102737805 CDS
T08708
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lww03000
]
102737805 (RC3H2)
04121 Ubiquitin system [BR:
lww04121
]
102737805 (RC3H2)
Transcription factors [BR:
lww03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
102737805 (RC3H2)
Ubiquitin system [BR:
lww04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102737805 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
102737805
NCBI-ProteinID:
XP_030890574
UniProt:
A0A7F8RBM3
LinkDB
All DBs
Position
Unknown
AA seq
1189 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKIVPSTNGISNAENSVSQLIPRSTDSTLRALETVKKVGKVGTNGQNATGPSAE
SVTENKIGSPPKTPVSNVAATSAGPSNVGTELNSVPPKSSPFITRVPVYPQHSENIQYFQ
DPRTQIPFEVPQYPQTGYYAPPPTVPAGVAPCVPRFVRSSHVPESSLPPASMPYADQYST
FSPRDRMSSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPVYPRDDIIRSSSLPPM
DVMPSSVYQASLRDRYNSLDAYYSVACQPPSEPRTSVPLPREPCGHLKTSCEEQIRRKPE
QWAQYHTQKAPLVSSTLPVATQSPTPPSPLFSVDFRTDFSESVSGTKFEEDHLSHYSPWS
CGTIGSCINAIDSEPRDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATS
SAHYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDE
GRHLSLNLLSKEIELRNGESDYTEDASDTKPDRDIELELSALDTDEPDGQGEQIEEILDI
QLGISPQNDQLLNGTAVENGHPVQQHQKEPLEQKRQSLGEDHVILEEQKTILPVTSCFSQ
PLPVSISNASCLPITTSVSVGNLILKTHVMSEDKNDFLKPVANGKMVNS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtttgcaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgaccagactgccatcaacacagac
attgatgtgcttcctgtcaactttgcacttctccagttagttggagcccaggtaccagat
catcagtcaataaagttaagtaatttaggtgagaacaaacactatgaggttgcaaagaaa
tgtgttgaggatttggcactctacttgaaaccactaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactgagccgtccaatgcaaaggaaactggtgacacttgtaaactgt
caactggtggaggaagaaggtcgtgtcagagccatgcgagcagcccgttcacttggagaa
agaactgtaacagaactaatattacagcaccagaatccccagcaattgtctgccaacctg
tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaagaagaggcc
ttgaagctggtattgctagcattagaagatggctctgctctctcaaggaaagtactggta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcatgttttaaggttaccaaaagggatgaagat
tcttctctgatgcagctaaaggaggaatttcggagttatgaagcattacgcagagaacat
gatgcccaaattgttcatattgctatggaagcaggactccgcatttcacctgagcagtgg
tcttcacttctgtatggtgacttggcacataaatcacacatgcagtctatcattgataag
ctgcagtctccagaatcatttgcaaagagtgtccaggaattgacaattgttttgcaacga
acgggtgacccagctaacttaaatagactgaggcctcatttagagcttcttgcaaacata
gaccctaatccagatgctgtttcaccaacttgggagcagctagaaaatgcaatggtagct
gttaaaacagtggttcatggccttgtggacttcatacaaaattatagtaggaaaggccat
gagacacctcagcctcagccaaacagcaaatacaagactagcatgtgccgagatctgcgt
cagcaaggagggtgtccccgaggaacaaattgtacttttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgcaactgtaagaacatttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaacggggaaaattgttccaagtacaaacggaatttcaaatgcagaa
aacagtgtttcccagctaatcccacgtagtactgacagtacgttaagagctctggagact
gtgaagaaggtggggaaggttggcactaatggtcagaatgctactgggccttctgcagaa
tccgtcactgaaaataaaattggctctccacccaagactcctgtaagtaatgtagcggct
acctcagctgggccttctaatgttggaacagagctgaattctgtgcctccaaaatccagc
ccatttataactagagtaccagtatatcctcagcactctgaaaacattcagtattttcaa
gatccaaggactcagataccctttgaagtcccacagtacccacagacaggctactacgca
ccccctccaacggtgccagccggtgtggctccctgtgttcctcgctttgtgaggtccagt
catgttccagagtcctccctcccacctgcttctatgccatatgccgatcagtacagcaca
ttttcccctcgagatcgaatgagttcttctccttaccagccccctcctccgcagccatac
ggaccagttcctccagtaccttctggaatgtacgcgcctgtgtatgacagcaggcgcatc
tggcgcccgccggtgtacccgcgagatgacattattcggagcagttccttacctccaatg
gacgtgatgccctcgtctgtttaccaggcgtccttgcgagacagatataactcactagat
gcgtattactctgtggcttgtcagccaccaagcgagccaaggacaagtgtgcctttacca
agggaaccttgtggtcatttgaagaccagttgcgaggagcagataagaagaaagccagag
cagtgggcacagtaccacactcagaaagcacctcttgtctcttcaactcttcctgtggca
acacagtcaccaacaccaccttctcctctattcagtgtagactttcgcactgatttctct
gagagcgtgagtggtacaaaatttgaagaagatcatctttctcattattctccctggtct
tgtggcaccataggctcctgtataaatgccatcgattcagagcccagagatgtaattgct
aattcaaatgctgtattaatggacctggacagtggagatgttaagagaagggtgcattta
tttgaaacccagagaaggacaaaagaagaagacccaataattccatttagtgatggacct
atcatctcaaaatggggtgcaatttccagatcttcacgtacaggttaccataccacggat
cctgtccaggccactgcttcccaaggaagtgccactaagcctatcagtgtatcagattat
gttccttatgtcaatgctgttgattcaaggtggagttcatacggtaacgaggccacatca
tcagcacactatattgaacgggacagattcattgttaccgatttatccggtcatcgaaag
cattccagtactggagaccttttgagcattgaacttcagcaggccaagagtaactcattg
cttcttcagagggaggccaatgctctggccatgcaacagaagtggaattccctggatgaa
ggccgtcaccttagcttaaatcttctaagcaaggaaattgaactgagaaatggcgagagt
gattatacagaagatgcaagcgatactaagcctgatagggatattgagttagagctttcg
gcacttgatactgatgaacctgatggacaaggtgaacaaattgaagagatcctggacata
cagcttggtatcagtcctcaaaatgatcaattgctgaatggaacagcagtggaaaatggg
catccggtccagcagcaccaaaaggagccactggagcagaagagacagagtttaggtgaa
gaccatgtgattctggaggagcaaaaaacaattctgccggtaacttcttgctttagccag
ccactcccagtgtccattagcaatgcaagttgcctccccatcaccacgtctgtcagtgtt
ggcaacctcattctgaaaactcatgttatgtctgaagataaaaacgactttttaaaacct
gttgcaaatgggaagatggttaacagctga
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integrated database retrieval system
