Leptonychotes weddellii (Weddell seal): 102738196
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Entry
102738196 CDS
T08708
Symbol
PTCH1
Name
(RefSeq) protein patched homolog 1 isoform X1
KO
K06225
patched 1
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04024
cAMP signaling pathway
lww04340
Hedgehog signaling pathway
lww04360
Axon guidance
lww05200
Pathways in cancer
lww05205
Proteoglycans in cancer
lww05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102738196 (PTCH1)
04024 cAMP signaling pathway
102738196 (PTCH1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
102738196 (PTCH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102738196 (PTCH1)
05205 Proteoglycans in cancer
102738196 (PTCH1)
09162 Cancer: specific types
05217 Basal cell carcinoma
102738196 (PTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
Motif
Other DBs
NCBI-GeneID:
102738196
NCBI-ProteinID:
XP_006738359
UniProt:
A0A2U3Y3R7
LinkDB
All DBs
Position
Unknown
AA seq
1301 aa
AA seq
DB search
MFNPQLMIQTPKEEGANVLTTEALRQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELIT
ETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLQWTNFDPLEFLEELKKI
NYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNATKPLDVALVLNGGCHGLS
RKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNEDK
AAAVLEAWQRTYVEVVHQSVAPNSTQKVLSFTTTTLDDILKSFSDVSVIRVASGYLLMLA
YACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVG
VDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR
AFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCFTSPCVSRVIQVEPQAYT
ETHDNTRYSPPPPYSSHSFTHETQITMQSTVQLRTEYDPHTHVYYTTAEPRSEISVQPVT
MTQDTLSCQSPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSSFAEKHYAPFLLKPKAKV
VVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRETREYDFIAAQFKYFSFYNMYIVTQKAD
YPNIQHLLYDLHKSFSNVKYVMLEENKQLPKMWLHYFRDWLQGLQDAFDSDWETGKIMPN
NYKNGSDDGVLAYKLLVQTGSRDKPIDISQLTKRRLVDADGIINPSAFYIYLTAWVSNDP
VAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFYLNGLRDTSDFVEAI
EKVRTICNNYTSLGLSSYPNGYPFLFWEQYIGLRHWLLLSISVVLACTFLVCAVFLLNPW
TAGIIVMVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDK
NRRAALALEHIFAPVLDGAVSTLLGVLMLAGSEFDFIVRYFFAVLAILTILGVLNGLVLL
PVLLSFFGPYPEVSPANGLNRLPTPSPEPPPSVVRFAVPPGHANNGSDSSDSEYSSQTTV
SGISEELRHYEAQQGTGGPAHQVIVEATENPVFARSTVVHPEARHHPPSNPRQQPPLDSE
SLPPGRPGQQPRREPPREGLRPPPYRPRRDAFEISTDGHSGPSNRDRAGPRGARSNNPRH
PAFTAMGSSAPSYCQPITTVTASASVTVAVHPPPAPGPGSARSPRGGLCPGYGDYPETDH
GLFEDPHVPLNVRRERRDSKVEVIELQDVECEERPRGSSSN
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcctcaactcatgattcagaccccgaaagaagaaggtgctaacgtcctgacc
acggaagctctccgacaacacctggactccgcactccaggccagccgagtacatgtatat
atgtataacaggcagtggaaattggaacatttgtgttacaaatccggagaacttatcaca
gaaacaggttacatggatcagataatagaatatctttacccttgtttaattattacacct
ttggactgcttctgggaaggggcaaagttacaatctgggacagcgtacctactaggtaag
cctcctttgcagtggacaaactttgaccctttggaattcctggaagagttaaagaaaata
aactatcaagtggacagctgggaggaaatgctgaataaggccgaagttggtcatggttac
atggaccggccctgcctcaacccggctgatccagactgccctgccacagcccccaacaaa
aacgcgaccaaacctcttgatgtggcccttgttttgaatggtggatgtcatggattatcc
agaaagtatatgcactggcaagaggaactgattgtgggtggcacggtcaagaatagtact
gggaagcttgtcagtgcccacgctctgcagaccatgtttcagttaatgactcccaagcaa
atgtacgaacacttcaaggggtacgagtatgtctcgcacatcaactggaacgaggacaag
gcagccgccgtactggaggcttggcagaggacgtacgtggaggtggttcatcaaagtgtc
gctccaaactccactcagaaggtgctttcctttaccacaacgaccctggacgacatcctg
aagtccttctctgatgtcagtgtcatccgagtggccagtggctacctactgatgcttgcc
tatgcctgtttaaccatgctgcgctgggactgctccaagtcccagggtgccgtggggctg
gctggcgtcctgttggttgcactgtccgtggctgcaggattgggcctgtgctcattgatc
gggatttcctttaacgctgcaacaactcaggttttgccgtttcttgctcttggcgttggt
gtggatgatgttttccttttggcacatgcatttagtgaaacaggacagaataaaagaatc
ccttttgaggacaggactggagagtgcctcaagcgcacgggagccagtgtggccctcacc
tccatcagcaatgtcaccgccttcttcatggccgcactgatccccattcccgccctgcgg
gccttctccctccaggcagccgtagtagtggtattcaattttgctatggttctgctaatt
tttcctgcgattctcagcatggatttgtatcgacgtgaggacaggagattggatattttc
tgctgttttacaagcccctgcgtcagcagagtgattcaggttgaacctcaggcctacacg
gagactcatgataacacccgctacagccccccgcccccctacagcagccacagcttcacc
catgaaacccagatcaccatgcagtccacagtgcagctccgcacagagtacgacccccac
acgcatgtatactacaccactgccgagccacgctccgagatctccgtgcagcctgtcacc
atgacccaggataccctcagctgccagagccccgagagcaccagctccacgagggacctg
ctctcccagttctccgactccagcctccactgccttgagcccccctgcaccaagtggaca
ctttcatcttttgctgagaaacactatgctcctttcctcttgaaaccaaaagccaaggtc
gtggtgatcttcctttttctgggcttgctgggggtcagcctttatgggaccacccgagtg
cgcgatgggctggaccttacagacattgtgcctcgggaaaccagagaatatgactttatt
gctgcacaattcaaatacttttctttctacaacatgtatatagtcacccagaaagcagac
tacccaaatatccagcacttactttacgaccttcacaagagtttcagcaatgtgaagtat
gtcatgttggaagaaaataaacagcttcccaaaatgtggctgcactacttcagagactgg
ctccaaggacttcaggatgcatttgacagtgactgggaaactgggaaaatcatgccaaac
aattacaaaaatggatcagatgatggggtccttgcctacaaactcctggtgcagaccggc
agccgtgataaacccattgacatcagtcagctgaccaaacggcgcctggtggacgcggat
ggcatcatcaatcccagcgcattctacatctacctgaccgcttgggtcagcaatgaccct
gtggcttacgccgcctcccaggccaacatccggcctcaccgtcctgagtgggtgcacgac
aaagccgactacatgccagaaaccaggctcagaatcccagcagcggagcccatcgaatac
gctcagttccctttctacctcaacggcttgcgggacacctcagacttcgtggaagccatc
gaaaaggtcagaaccatctgcaacaactacacgagcctggggctctccagctaccccaac
ggctaccccttcctcttctgggagcagtacatcggcctccggcactggctcctgctgtcc
atcagcgtggtgctggcctgcacgttcctggtgtgtgccgtcttcctcctgaacccctgg
acggccgggatcattgtgatggtcctggctttgatgacggtcgagctctttggcatgatg
ggcctcattggaatcaagctgagtgccgtgcccgtggtcatcttgatcgcttccgtcggc
ataggagtggaattcaccgttcatgttgctctggccttcctaacggccattggtgataag
aaccgcagggccgcgctcgccctggagcacatatttgcacccgtcctggacggcgccgtt
tccactctgctgggagtgctgatgctcgcagggtctgagtttgatttcattgtcaggtat
ttctttgctgtcctggcaatcctaacaatcctgggtgttctcaacgggctggttttgctc
ccagtccttctgtccttcttcggcccgtaccccgaggtatctccagccaacgggctgaac
cgactgcccaccccttcccccgagccgccccccagtgtggtccgctttgccgtgcccccc
ggtcatgcaaacaatgggtctgattcctctgactcggagtacagttctcagacaacggtg
tcaggcatcagtgaagagcttcggcactacgaggcccagcagggcaccgggggccctgcc
caccaagtgatcgtggaagccacagaaaaccctgtctttgcgcgctccactgtggtccat
cccgaagcgagacatcacccaccctcaaaccctcgacagcagccccccctggactcagag
tccctgcctcccggacgaccaggccagcagccccggagggagccccccagggaaggcttg
cggccacccccctacagaccgcgcagagatgctttcgaaatttctactgacgggcattcc
ggccctagcaatagggaccgcgcaggcccccggggagcccgttctaacaaccctcggcac
cccgcgttcactgccatgggcagctcggcgcccagctactgccagcccatcaccactgtg
acggcctcggcgtccgtgactgttgccgtacaccccccgcctgcccccgggcccggctcg
gcgcggagcccccgagggggactgtgcccgggctacggggactaccccgagactgaccac
gggctgtttgaggacccccacgtgcctttgaacgtccggcgcgagaggagggactccaag
gtggaagtcatagagctgcaggacgtggagtgtgaggagaggccccggggcagcagctcc
aactga
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integrated database retrieval system
