Leptonychotes weddellii (Weddell seal): 102738956
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Entry
102738956 CDS
T08708
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X2
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04115
p53 signaling pathway
lww04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102738956 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
102738956 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lww04121
]
102738956 (COP1)
Enzymes [BR:
lww01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102738956 (COP1)
Ubiquitin system [BR:
lww04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102738956 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
102738956 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
zf-C3HC4_2
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
zf-C3HC4
Beta-prop_DCAF4
zf-RING_2
Beta-prop_WDR90_POC16_2nd
zf-RING_5
WD40_RFWD3
zf-RING_UBOX
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
zf-rbx1
zf-C3HC4_3
WD40_like
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
zf-C3HC4_4
Beta-prop_IFT122_1st
zf-RING_4
WDR90_beta-prop_4th
zf_C2H2_10
RING_XB3-XBAT31
zf-RING_10
Prok-RING_4
TRAF3_RING
DZR
Motif
Other DBs
NCBI-GeneID:
102738956
NCBI-ProteinID:
XP_006730551
UniProt:
A0A2U3XGG5
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNELILKQKQRFE
EKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQKKKQLEAESHAAQL
QILMEFLKVARRNKREEMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSS
QTKKQPWYNSTLASRRKRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTR
YNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIH
YPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDF
NLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVH
YYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHIN
EKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVS
AVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggaagcatacatgacgaaatgtggccacagcttttgctacaagtgtattcat
cagagtttggaggataataatagatgtcccaagtgtaactatgttgtggataatattgac
catctgtatcctaatttcttggtgaatgagctcattctcaaacagaagcaaagatttgag
gaaaagaggttcaaattggaccactcagtgagtagcaccaatggccacagatggcaaata
tttcaggatttgttgggaactgatcaagataaccttgatttggccaatgtcaacctcatg
ttggaattactagtgcagaagaagaaacaactggaagcagaatcacatgcagcccaacta
cagatccttatggaattcctcaaggttgcaagaagaaataagagagaggaaatgagcggc
ttgtactctcctgtcagtgaggatagcacagtgcctcaatttgaagctccttctccatca
cacagtagtattattgattctacagaatacagccaacctcctggtttcagtggcagttct
cagacaaagaaacagccttggtataacagcacattagcatcaagaagaaaacgactcact
gctcattttgaagatttagagcaatgttacttttctacaaggatgtctcgaatttcagat
gatagtcgaactgcaagccagttggatgaatttcaggaatgcttgtctaagtttactcga
tataattcagtacgacctttggctacattgtcatatgctagtgatctctataatggttcc
agcatagtctctagtattgaatttgaccgggattgtgactattttgcaattgctggggtt
acaaagaaaattaaagtctatgaatatggcacagtcattcaggatgcggtggatattcat
taccctgaaaatgaaatgacctgcaattccaaaatcagctgtatcagttggagtagttac
cataagaatctgttagccagcagtgattatgaaggcactgtcatcctatgggatggattt
acaggacagaggtcaaaggtctatcaggagcatgagaaaaggtgttggagtgttgacttt
aatttgatggatcctaaactcttggcgtcaggttctgatgatgcaaaagtgaagctatgg
tctaccaacctagacaactcagtggcaagcattgaggcgaaggctaacgtgtgctgtgtt
aaattcagcccgtcttctagataccatttggctttcggctgtgcagatcactgtgtccac
tactatgatcttcgtaacactaaacagccaatcatggtattcaaaggacaccgaaaagca
gtctcttatgcaaagtttgtgagtggtgaggaaattgtctctgcctcaacagacagccag
ctaaagctgtggaatgtagggaaaccatactgtctacgttccttcaagggtcacatcaat
gaaaaaaactttgtaggccttgcttccaatggcgattatatagcttgtggaagcgagaac
aactctctttacttgtactataaaggactttctaagactttgctaacttttaagtttgat
acggtcaaaagtgttctggataaagaccgaaaagaagatgatacaaatgaatttgttagt
gctgtgtgctggagggcattgccagatggggagtccaatgtgctgattgctgctaacagt
cagggtacaattaaggtgctggagttggtatga
DBGET
integrated database retrieval system
