Leptonychotes weddellii (Weddell seal): 102739629
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Entry
102739629 CDS
T08708
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102739629 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lww03032
]
102739629 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
lww03400
]
102739629 (TOPBP1)
DNA replication proteins [BR:
lww03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
102739629 (TOPBP1)
DNA repair and recombination proteins [BR:
lww03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
102739629 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
Gp_dh_C
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
Gp_dh_N
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
102739629
NCBI-ProteinID:
XP_030897116
UniProt:
A0A7F8RV30
LinkDB
All DBs
Position
Unknown
AA seq
1643 aa
AA seq
DB search
MSRNDKEPFLVKFLKSSDNSECFFKALESIKEFQSEEYLQIITEEEALKIKENDRSLYIC
DPFSGVVFDHLKKLGCRIVGPQVVIFCLHHQRCVPRAEHPVYNMVMSDVTVSCTSLEKDK
REEVHKYVQMMGGRVYRDLNISVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKKIARYTDVNMEDFKCPIFLGCIICVTGLCSLDRKAVQQLTIKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTTQWFFDSVDKGFCQDESIYKTEPRPETKTVPDTSTPT
GQINTVDSRTLSDVSHISNISASCINESMCNSVLNSKVEPTLENLENLDVSAFQAPEDLL
DGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWDKSAHRP
HVVGAKWLLECFSKGYMLPEEPYIHANYQPVEIAVSDQPESKTALLKKNNSFSKKDLASD
EKHEQADEDLLSQYVNNNPTVAYIDDICMIPPMANSTAQSRLRTGSLSSVESPSPIFQER
DPASIKWGDAGAEYVVESTGVFTTMEKAGAHLKGRAKRVIISAPSANAPMFMMGVNHEKY
DNSLEIVSTASCTTNCLAPLAKVIHDNFSIVEGLMTTMHATTATQKTVDVPSGKLWRDGR
GAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYNDIKK
VVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAGAGIALNDHFVKLISWYDNEFGY
SNRVVDLMVYMASKDVQEFFVRKSNAKKGMFASTHLVLKEPGGSKYEAAKKWNLPAVTIS
WLLETARMGKRANESHFLIEKSTKEEQSLEAEITNRVNLNPDTPEHPVAHLETHRKTAVT
PLDMNRFQSKAFHAVISQHTRQVSVSPPVGQPLQKEPSLHLDTPSKFLSKDKLFKPSFDV
KDALAALETPGGPSQQKRKLSTPLSEVIVRNLKLALANSSRNAVALSASPQLKGAQSEKE
EAPKPLHKVVVCVSKKLSKKQGELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYK
SVKERGVHIVSEHWLLECAQEYKHLPESLYPHTYNPKMSLDISTVQDGRLSNSRLLSADS
TTKDDEPNHLPIEENDIDSITTSNKESAKSNGDERNDSKGALTQTLEMRENFQKQLQEIM
SATSIVKPQGQRASLSRSGCNSASSTPDSTRSARSGRSRVLEALRQSRQIVPDVNTEPSQ
NEQIIWDDPTAREERARLASNLQWPSCPTQYSELQVDIKKLEDSPSQEPLHDSEIAKQAV
CDPENMCVTEAPKHPISEELETPVKDSHLIPTPQAPSIAFPLANPPVAPHPREKIITIEE
THEDLKKQYIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPNCTHIVVGHPLRNEKYL
ASVAAGKWVLHRSYLEACRTAGHFVLEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRK
KLQQRQESGIVEGAFSGWKVILYVDQSREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFS
DFNKLKPDDSGVNIAEAAAQNVYCLKTEYIADYLMQESPPRVENYCLPEAISFLPNNKEP
GPGLSQKRKAPTEKNKIKRPRVN
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgacaaagaaccgtttcttgtgaagtttttaaagtcttcagacaactcc
gaatgtttttttaaagctcttgagtcaataaaagagttccaatcagaagaatatcttcag
attattacagaagaagaagcattgaagataaaggaaaatgataggtcactttatatctgt
gacccatttagtggcgttgtctttgatcacctcaaaaagcttggctgcagaattgttggc
cctcaagtagtcatattttgtttgcaccaccagcgatgcgtcccaagagctgaacatcca
gtttataatatggttatgtctgatgtaactgtatcttgtacaagcctggaaaaagataaa
agggaagaagttcataaatatgtacaaatgatgggtggacgtgtatatagagaccttaat
atatcagtaactcaccttattgcaggagaagttggcagcaaaaaatatttagttgctgca
aacctaaagaaacctattttgcttccttcttggattaaaacactttgggaaaagtcacaa
gagaaaaaaatagctaggtatactgatgtaaacatggaagacttcaagtgtcctattttt
cttggttgcattatctgtgtgactggcttgtgtagcttagacaggaaggcagttcagcaa
ctcacaattaagcatggaggtcaatacatgggacaactgaaaatgaatgaatgtacacac
ctcattgtgcaagaaccaaaaggtcaaaaatacgaatgtgccaagagatggaatgtacac
tgtgtgaccacacagtggttttttgacagtgttgacaaaggtttttgtcaggatgaatcc
atatacaagacagagcctagaccagaaacaaagactgtgcctgatacttcaactcctact
ggccagatcaacacagttgacagtcgtactctttcagatgtcagccatatttccaacatc
agtgcaagttgcataaatgaatcgatgtgtaattcagttcttaatagtaaagtggagcct
acacttgaaaatctagaaaatctggatgtcagtgcatttcaagcacctgaagatttatta
gatggttgtcggatctatctttgcggttttagtggcagaaagctagataaactgagaagg
cttattaacagtggaggtggagttcgttttaatcagctcaatgaagatgtaactcatgtt
attgtgggagattatgatgatgaattgaagcagttttgggataaatcggcccacaggcct
catgtagtgggagcaaaatggttgctagagtgttttagtaaaggttatatgcttcctgaa
gagccatatatccatgctaactaccagccagtggaaattgcagtttcagatcaacctgaa
agtaaaacagctcttttaaaaaagaacaacagcttctctaagaaagacttggcttctgat
gaaaagcatgaacaagctgacgaagatctgctctctcagtatgtaaataataacccaaca
gtagcttatatagatgacatatgtatgattccacccatggcaaattccacggcacagtca
aggctgagaacaggaagcttgtcatcggtggaaagtccatctcccatcttccaggagcga
gatcccgccagcatcaaatggggtgatgctggtgctgagtatgttgtggagtccactggg
gtcttcaccaccatggagaaggctggggctcacttgaagggcagggccaagagggtcatc
atctctgctccttctgccaatgcccccatgttcatgatgggtgtgaaccatgagaagtat
gacaactccctcgagattgtcagcactgcctcctgcaccaccaactgcttggctcctctg
gccaaggtcatccatgacaacttcagcattgtggagggactcatgaccaccatgcatgcc
accactgccacccagaagaccgtggacgtcccctctgggaagctgtggcgcgacggccga
ggggctgcccagaacatcatccctgcttccactggcgctgccaaggctgtgggcaaggtc
atccctgagctgaacgggaagctcactggtatggccttccgtgtccccacccccaacgtg
tccgtcgtggatctgacctgtcgcctggagaaagctgccaaatacaacgacatcaagaag
gtggtgaagcaggcatcagagggccccctcaagggcatcctggggtacactgaggaccag
gttgtctcctgcgactttaacagtgacacccactcctccaccttcgatgccggggctggc
attgctctcaacgaccactttgtcaagctcatttcctggtatgacaatgaatttggctac
agcaaccgggtagtggaccttatggtctacatggcctccaaggatgttcaggaattcttt
gttcgcaaatccaatgcaaagaaaggcatgtttgccagtacgcatcttgtactgaaagaa
ccaggtggatctaaatatgaagctgccaagaagtggaatttaccagcagtcaccatatct
tggttgttggagactgctagaatgggaaagagagcaaatgaaagccattttctgattgaa
aagtcaactaaagaagaacaaagtttggaagctgaaataacaaacagggtgaatctaaat
ccagatactccggagcatcctgttgcacacctggaaactcacaggaaaacagctgttaca
cctttagatatgaaccgctttcagagtaaagctttccatgctgtgatctcacaacacacc
agacaggtttcagtctccccaccagtgggacagccacttcagaaggagccctccttacat
ctggatacaccatcaaaatttctgtccaaggacaaactcttcaagccttcctttgatgtg
aaggatgcgcttgcagccttggaaactccaggaggtcctagccagcagaaaaggaaactg
agtacgccactttcagaagtcattgtcagaaacttgaaacttgctttggcaaatagctct
cgaaatgctgttgctctgtctgccagccctcagctgaagggtgcccaatcggagaaggaa
gaagcccccaagccacttcacaaggtagtggtatgtgtgagtaagaaactcagtaagaag
cagggtgaactgaatgggattgcagcctctctaggagcagattacagatggagttttgat
gaaacggtgactcatttcatttatcaaggccgaccaaatgacactaaccgagagtataaa
tctgtaaaagaaagaggagtacacattgtttcagaacactggcttttagaatgtgcgcaa
gagtataaacatcttcctgaatctctttatccacatacttacaatcccaaaatgagcttg
gatatcagtacagtgcaagatggcagactctctaatagtcgactactctcagcggattca
acaacaaaggatgatgagccaaatcatttgcctatagaagaaaacgatatagacagtata
accaccagtaacaaagaatcagcaaaatcaaatggagatgaaaggaatgactctaaagga
gctctgacacagaccttggagatgagagaaaactttcaaaagcagctgcaggaaataatg
tctgcaacatcaatagtgaaaccccaaggacagagggcttccctttcaagaagtggttgt
aacagtgcttcttcaacccctgatagcactcgctctgcccgcagtgggcgaagtagagtc
ctggaggcactgaggcagtcgcgtcaaatagtacctgatgtcaacacagagccctcccag
aatgaacagatcatttgggatgacccgacagccagggaggagagagcaaggcttgccagc
aatctgcagtggcctagttgtcccacacagtattctgagcttcaggttgacattaaaaaa
ttggaggattctccttcccaggagcctttacatgattcagaaattgctaaacaggctgtc
tgtgatcccgaaaacatgtgtgtgactgaagccccaaaacacccgatctctgaagaactg
gaaacaccggtaaaagacagccacctgatccctacacctcaagcccccagtattgccttc
cccctagccaacccaccagtggctccacaccctagagaaaagattataacaatagaggaa
acacatgaagacttaaaaaaacagtatatatttcagttgtcatctctgaatcctcaagaa
cgtattgattattgtcatctgattgaaaaactaggtggattagtaatagagaaacagtgc
tttgatcccaattgtacacacattgttgtgggacatccacttcgaaacgagaagtattta
gcctcagtggcagctgggaaatgggtgcttcatcgctcctacctggaagcatgccggact
gctggacacttcgtgctggaagaagactatgaatggggaagtagttccatactcgatgtt
ttgactggaatcaatgttcagcaacgaagactagcacttgcagcaatgagatggaggaaa
aaactccagcaaagacaagaatcgggcatcgttgagggggcatttagtgggtggaaagtt
atcttatatgttgaccaatcccgagaagcaggattcaaacgccttcttcagtcaggagga
gcaaaggtactacctggtcattctgtacctttgtttaaagaagccacacatctcttttct
gacttcaataaactgaaaccagatgactcaggagttaatatagcagaagctgccgcacaa
aatgtgtactgcttgaaaacagagtacattgctgattatctgatgcaggaatcccctcct
cgagtagaaaattactgtctaccagaagcgatttcatttcttccgaataataaggaacct
gggcctggattatcacagaagaggaaagctcctacagagaaaaataaaatcaaacgacct
agagtaaactaa
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integrated database retrieval system
