Leptonychotes weddellii (Weddell seal): 102739936
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Entry
102739936 CDS
T08708
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X2
KO
K10858
DNA mismatch repair protein PMS2
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03430
Mismatch repair
lww03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102739936 (PMS2)
03460 Fanconi anemia pathway
102739936 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lww03400
]
102739936 (PMS2)
DNA repair and recombination proteins [BR:
lww03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
102739936 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
UfSP_MPN_N
Motif
Other DBs
NCBI-GeneID:
102739936
NCBI-ProteinID:
XP_006747167
UniProt:
A0A2U3YTX2
LinkDB
All DBs
Position
Unknown
AA seq
859 aa
AA seq
DB search
MERAEGPSTELAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATAIDLRLRD
YGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQDFADLTQVETFGFRGEALSSLCALSDV
TISTCHTSAKVGTRLVFDHNGKIVQKTPHPRPRGTTVSVQQLFYTLPVRHKEFQRNIKKE
YAKMVQVLHAYCIISAGIRVSCSNQVGQGKRQPVVCSSGSSSIKENIASVFGQKQLQSLI
PFVQLPPSDSVCEEYGLSQADALNTLFHISGFISHCAHGVGRSSTDRQFFFINGRPCDPA
KVSRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLV
GMFDSDVNKLNVSQQPLLDVEGHVVKTHSAEMDKPQPAKPDSPTLSRTRGEEKRAVTISR
LRETFSLRQKMEDRPEGPKSPEPRRVSPRRKRHEQLPGTSGSLCARRPIPGTDSRGPQEE
MMCSDKGPCDRRDRGDTEQDSGHSHPSASPEEGLGTPEVGGHASKEFSQGSVESREESPE
TDRRSADPEGHLDQEDGSRTRRVLPQPADVSSSNTKRFKKDGVPFSSDAHQGLVKTQTLS
ASQVDVAVKIHKKIVPLAFSMRSLAQRIKQLQHQEQRREGTQNCRKFRAKICPGENQAAE
EELRKEISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTALQGQ
RLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEGAPVTERAKLISLPTSKNWTFGPQ
DIDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPW
NCPHGRPTMRHIANLDVIS
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggccgaagggccgagtacagaacttgctaaggccatcaaacctatcgatcgg
aagtcagtccatcagatttgttctggacaggtggtactcagtctaagtactgctgtgaag
gagttggttgaaaatagtgtggatgccggggccactgctattgatctaaggcttagagac
tatggggtggatctcattgaagtttcagacaatggatgtggggtagaagaagaaaacttt
gaaggcttaactctgaaacatcatacttctaagattcaagactttgctgacctaactcag
gttgaaacttttggctttcggggtgaagctctgagctcactttgtgcactgagtgatgtg
actatttctacctgccacacatcggcgaaggtcgggactcgactggtgtttgatcacaat
gggaaaattgtccagaaaaccccccacccacgacccagagggacgactgtcagtgtgcag
cagctattttatacactgcctgtgcgccataaggagtttcaaaggaatattaaaaaggag
tacgccaaaatggtccaggtcttgcatgcatactgtatcatttcggcaggcatccgtgtc
agttgcagcaatcaggtcgggcaagggaaacggcagccggtggtatgcagcagtgggagc
tccagcataaaggaaaatattgcatcggtgtttgggcaaaaacagctgcaaagcctcatt
ccctttgttcagctgccccctagtgactccgtttgtgaagagtacgggctgagccaagct
gatgctctgaataccctgtttcacatctcaggcttcatctctcactgtgctcacggtgtt
ggaagaagttcaacagatagacagtttttcttcatcaatgggcggccttgtgacccagca
aaggtttccagactggtgaacgaggtctatcacatgtataatcgacatcaatatccattt
gttgttcttaacatttctgttgattcagaatgtgttgatatcaatgtcactccagataaa
aggcaaattttactacaagaggagaagcttctgttggcagtcttaaagacatctttggta
ggaatgtttgacagcgacgtcaacaaactcaatgtctctcagcagcccttgttggatgtg
gaaggtcacgtagtaaaaacgcactctgcagaaatggacaagcctcagccagcaaagccg
gatagtcccactttgtcaaggaccagaggagaagagaaaagggcagtgaccatttccaga
ctgagagagaccttttctcttcggcagaaaatggaggacaggcccgagggcccgaagagc
cctgaaccaaggcgggtttccccaagacggaagagacacgaacagcttcccggcacttca
ggctccctctgcgcccggaggcccatccctggcacagactcgcgcggcccccaggaggag
atgatgtgttcagataagggcccctgtgaccgcagggacagaggggacacggagcaggac
tcggggcatagccacccatcagccagcccagaggaagggctcggcaccccagaagtggga
ggtcacgccagcaaggagttttcccaaggaagtgtggagtctcgggaggagtcacctgag
actgaccgtcgctctgcagaccccgaaggccatctcgaccaagaggatggcagtcggaca
cgtagagtcttgcctcagcccgccgacgtgtcctcctcaaacacaaagcgttttaagaaa
gatggagtccctttcagttctgatgcccaccaagggttggtgaagactcagaccttgtca
gcatctcaggttgacgtggctgttaaaatccataagaaaatagtgcccctggccttttct
atgcgctctttagctcaacgaataaagcagttgcagcaccaagaacagcgaagagaaggc
acacagaattgtaggaagttcagggccaagatttgcccgggagaaaaccaggccgcagag
gaagaactcagaaaggagataagtaaaacgatgttcgcggaaatggagatcattggtcag
tttaacctgggatttataatcaccaaactgaatgcagacatcttcatagtggaccagcac
gctacagacgagaagtacaactttgagatgctgcagcaacacactgccctccagggtcag
aggctcatagcaccccagactctcaacttaacggctgtcaatgaagctgttctcatagaa
aacctggaaatattccgaaagaacggctttgattttgttatcgacgaaggggctccagtc
actgaaagagctaaattgatttctttgccaactagtaaaaactggaccttcggaccccag
gacatcgacgagctgatctttatgctgagcgacagtcctggggttatgtgccggccttcc
cgagtcaggcagatgtttgcctccagagcctgtcggaagtccgtgatgattggaactgct
cttaacacaagcgagatgaagaaactcattacccacatgggtgagatggaccatccctgg
aactgtccccacggaaggccgaccatgagacacattgccaacctggatgtcatttcttaa
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