Leptonychotes weddellii (Weddell seal): 102740136
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Entry
102740136 CDS
T08708
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww02010
ABC transporters
lww04148
Efferocytosis
lww04975
Fat digestion and absorption
lww04979
Cholesterol metabolism
lww05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102740136
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102740136
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
102740136
04979 Cholesterol metabolism
102740136
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102740136
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lww02000
]
102740136
Transporters [BR:
lww02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102740136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
102740136
NCBI-ProteinID:
XP_030887199
UniProt:
A0A7F8R1M5
LinkDB
All DBs
Position
Unknown
AA seq
2146 aa
AA seq
DB search
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVLGNFNKSIVSRLFSDAQRLLLYSQKDT
SMKDIHQVLRTLQQIERSSPGKVLFLWNKELRSHVFWCMQHILEKAELSSWDKGGKKQSI
FFSFQRELNSTSPFLNKELVKATETLLDSLGTLAQELFSMNSWSDMRQEVMFLTNVNSSS
SSTQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTDEDADSFYDNSTTPYC
NDLMKNLESSPLSRIIWKALKPLLVGKILYTPDTPVTRQVMAEVNKTFQELAVFHDVQGM
WEELSPKIWTFMESNPEMDLVRTLLDSRSNDHFWEQQLDGLDWTAKDILAFLAKHPEDVQ
SANGSVYTWREAFNETDQAIQTISRFMECVNLNKLEPVATEVRLISKSMELLDERKFWAG
IVFTGITPDSVELPRHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAY
LQDVVEQAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVI
IKGIVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDP
SVVFVFLSMFAVVTILQCFLISTLFSRANLAAACGGIIYFILYLPYVLCVAWQDYVGFTL
KIFVSLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTISVSMMLFDTFLY
GVMTWYIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSSQKGASEICVEEEPTHL
KLGVSIQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSG
TAYILGKDIRFEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAELEQM
ALDVGLPPSKLKSKTSQLSGGMKRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDV
ESSLSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVAEAR
LVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEES
GVDAETSDGTLPARRNRRAFGDKQSCLRPFTEDDATDPNDSDVDPESRETDLLSGMDGKG
SYQVKGWKLIQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYP
SLELQPWMYNEQYTFISNDAPEDMGTQELLNALTRHPGFGTRCMEGNPIPDMPCSVGEEE
WTTAPVPQTITDLFQNGNWTMENPSPTCQCSSDKIKKMLPVCPLGAGGLPPPQRKQNTAD
ILQNLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSHSLPSSQEVNNAI
KQVKKHLKLAKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILR
ASLQKGENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVF
LIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNL
PVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNK
LNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFA
MAVEGVVFFLITVLIQYRFFIRPRPVDAKLPPLNDEDEDVKRERQRILDGGGQNDILEIK
ELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKN
SILSDIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLV
KYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGR
SVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPV
QEFFGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQ
VFVNFAKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6441 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgcaggaacgcttccttgggttcaggggattatctgtaatgccaataacccc
tgtttccgttatccgactcccggtgaggcccctggggttcttggaaactttaacaaatcc
atcgtgtctcgcctgttctcagatgctcagcggcttcttctgtatagccagaaagacacc
agcatgaaggacatacaccaagttctgaggacgttgcagcagatagagcgttccagtcca
gggaaagttctgtttctgtggaacaaagagctccgttcacatgtcttctggtgcatgcag
catattcttgaaaaggcagaactcagttcatgggacaaaggaggtaaaaaacaaagtatt
tttttctcattccagagggaactaaactctacatctcctttcctgaacaaggaactggtt
aaagccacagaaactttgctggatagtctcgggactttggcccaagagctgttcagcatg
aacagctggagcgacatgcggcaggaggtcatgttcctgaccaatgtgaacagctccagc
tcgtccacccagatataccaagccgtgtcccgcatcgtctgtggccatcccgagggcggg
ggcctgaagattaagtccctcaactggtacgaggacaacaactacaaagctctctttggt
ggcaacggcacggatgaagatgctgacagcttttatgacaattctacaactccttattgc
aatgatctgatgaagaatttggagtccagtcccctttcccgcatcatatggaaagctctc
aagcctctgcttgttgggaagatcctgtatacacctgacactccagtcacaaggcaggtt
atggccgaggtgaataagacctttcaggaactggctgtgtttcatgatgtgcaaggcatg
tgggaagagctcagccccaagatctggaccttcatggagagtaacccggaaatggacctt
gttcggacactgttggacagtagaagcaatgaccacttttgggaacagcagttggatggc
ttagactggactgccaaagatatcctggcatttctggccaagcacccagaggatgtccag
tctgctaacggctctgtgtacacctggagagaagctttcaatgagactgaccaggcaatc
cagaccatctctcgcttcatggagtgtgtcaacttgaataagctcgaaccggtagcaaca
gaagtccggctcatcagcaagtccatggagttgctggacgagcggaagttctgggccggt
atcgtgttcaccggaatcactcctgacagtgtggagttgccccgtcatgtcaagtacaag
atccgaatggacattgacaatgtggagaggacaaataaaatcaaggatgggtactgggac
cccggtcctcgggctgacccctttgaggatatgcggtatgtctgggggggctttgcctac
ttacaagatgtggtggaacaggcgatcatcagggtgctgacgggcaccgagaagaaaact
ggtgtctatgtgcagcagatgccctacccctgttatgtcgatgacatcttcctgcgggtg
atgagccggtccatgcccctgttcatgacgctggcctggatctactccgtggctgtgatc
atcaagggcatcgtgtatgagaaggaggcgcggctgaaggaaaccatgcgcatcatgggc
ctggacaacggcatcctgtggttcagctggttcatcagtagcctcattcctctgctcgtg
agcgccggcctgcttgtggtcatcctgaaattaggaaacctgctgccctacagtgacccc
agcgtggtgtttgtctttctgtccatgttcgccgtggtgaccatcctgcagtgtttcctg
atcagcacactcttctcaagagccaacctggcggcagcctgtgggggcatcatctacttc
attctctacctgccctacgtgctgtgcgtggcatggcaagactatgtgggcttcacgctc
aagatcttcgtgagcctgctgtctcctgtggctttcgggtttggctgtgagtactttgcc
ctttttgaggagcagggcattggggtgcagtgggacaacctgtttgagagccccgtggag
gaagatggcttcaacctcaccatttcagtctccatgatgctgttcgacaccttcctctat
ggagtgatgacgtggtacatcgaggctgtctttccaggccagtatggaatccccaggccc
tggtattttccttgcaccaaatcctactggttcggtgaggaaagtgatgaaaagagccac
cctggttccagccagaagggagcatcagaaatctgcgtggaggaggagcccacacacctg
aagctgggtgtgtccattcagaacctgatgaaggtttaccgggatggcatgaaggtggct
gttgatggcctggccttgaatttctatgagggccagatcacctccttcctgggccacaat
ggagctgggaagaccaccaccatgtcaatcctgaccgggttgttccctcccacctcgggc
actgcctacatcctgggaaaagacattcgctttgagatgagcaccatccggcagaacctg
ggggtctgcccccagcataacgtgctgtttgacatgctgactgtggaagaacacatctgg
ttctatgcgcggctgaaggggctctcggagaagcacgtgaaagcagagctggagcagatg
gccttggatgtcggtttgccacccagcaaactgaaaagcaaaacaagtcagctgtcaggc
ggaatgaagagaaagctgtctgtggctttggcctttgttgggggatccaaggttgtcatt
ctggacgagcccacagccggtgtggacccttactcccgcaggggaatatgggagctcctg
ctgaaataccgacaaggccgcaccattattctctccacgcaccacatggatgaagcagac
atcctgggggacaggattgccatcatttcccatgggaagctgtgctgtgtgggctcctcc
ctatttctgaagaaccagctgggaacaggctactacctgaccctggttaagaaggatgtg
gaatcctccctcagttcctgcagaaatagcagtagcactgtgtcgtacctgaagaaggag
gacagtgtttctcagagcagttctgatgctggcctgggcagcgaccatgaaagtgacacg
ctgaccatcgatgtctcggccatctccaacctcatcaggaagcacgtggctgaggcccgg
ctagtggaagacattgggcatgaactgacttacgtgctgccctacgaagctgccaaggag
ggggcctttgtggaactcttccatgagattgatgaccggctctcagacctgggcatctcc
agttacggcatctcggagacgaccctggaagaaatatttctcaaagtggccgaagagagt
ggggtggatgctgagacctcagatggcaccttgccagcaagacgaaacagacgggccttc
ggggacaagcagagctgccttcgcccattcactgaagatgatgctactgatcctaatgat
tctgatgtagacccagaatccagagaaacagacctgctcagtgggatggatggcaaaggc
tcctaccaggtgaagggctggaagctcatacagcagcagtttgtggcgcttctgtggaag
aggctgctgattgccagacggagtcggaagggattctttgctcagatcgtcctaccagct
gtgtttgtctgcattgccctggtgttcagcttgatcgtgcccccctttggcaagtacccc
agcctggaacttcagccctggatgtacaacgaacagtacacgttcatcagtaatgatgct
cctgaggacatgggcacccaggaactcttgaatgccctcaccagacaccccggcttcggg
acccgctgtatggaaggaaatccaatcccagacatgccctgctcggtgggggaggaggag
tggaccaccgcccccgttccccagaccatcacggacctcttccaaaatgggaactggacg
atggagaacccctcacctacctgccagtgtagcagtgacaaaatcaagaagatgctgccc
gtgtgtcccctgggggcaggggggctgcctcctccacaaagaaaacagaacactgcagac
atccttcagaacctgacgggaagaaacatttcggattatctggtgaagacctatgtgcag
atcatagccaaaagtttaaagaacaagatctgggtgaatgagtttaggtatggagggttt
tccctgggtgccagtaattctcattcacttccttcaagtcaagaagttaataatgccatc
aagcaagtgaagaagcacttgaagctggccaaggacagttctgcagatcgatttctcagc
agcttggggaggttcatgacaggactggacacgaaaaataacgtcaaggtgtggttcaac
aacaagggctggcatgccatcagctctttcctgaacgtcatcaacaatgccattctgcgg
gccagcctgcagaagggagagaaccccagccagtatgggattactgccttcaatcacccc
ctgaatctcaccaagcagcagctctcggaagtggctctgatgaccacgtcagtggatgtc
cttgtgtccatctgtgtcatcttcgcgatgtccttcgtcccggccagctttgttgtgttc
ctgatccaagagcgggtcagcaaagcgaagcacctgcagttcatcagtggagtaaagcct
gtcatctactggctttccaatttcgtgtgggatatgtgcaactatgtggtccctgccacg
ctggtcattatcatcttcatctgcttccagcagaagtcctatgtgtcctctaccaacctg
cctgtgctggcccttctacttctgttgtacgggtggtcgatcacacctctcatgtaccca
gcctccttcgtgttcaagatccccagcacagcctacgtggtcctcaccagcgtgaacctc
ttcatcgggatcaacggcagtgtggccacttttgtgctggagctttttaccaacaataag
ctgaataacatcaatgatatcctgaagtctgtattcttgatcttcccacatttttgcctg
ggacgggggctcattgacatggtgaaaaaccaggcaatggctgacgccttggaaaggttt
ggggagaaccgttttgtttcgccactgtcctgggacttagtgggacggaacctcttcgcc
atggccgtggaaggggtggtattcttcctcatcactgttctcatccagtacagattcttc
atcaggcccagacctgtagatgcaaagcttcctcctttgaatgatgaggatgaagatgtg
aagcgggaaagacagagaattcttgatggtggaggacagaacgacatcttggaaatcaag
gagctgactaagatatatagaagaaagaggaagcctgccgttgacaggatttgcgttggc
attccgcctggcgagtgctttggacttctgggagttaatggggctgggaaatcatcaact
ttcaagatgttaactggagataccactgttaccagaggagatgctttcctgaacaaaaat
agtatcttatcagacatccatgaagtccatcagaacatgggctattgccctcagttcgat
gccatcacagagctgttgaccggaagagagcatgtggagttctttgccctcttgagagga
gtcccagagaaagaagttggcaaggttggtgaatgggcaattcggaaactgggccttgta
aagtatggagaaaaatatgctggcaactacagtggaggcaacaagcgcaagctctcaacg
gccatggctctgatcggcgggccccctgtcgtgtttctggatgaacctaccacaggcatg
gaccccaaagcccggcgattcttgtggaattgtgccctaagtattgtcaaggaaggcaga
tcagtagtgcttacatctcatagtatggaagaatgtgaagctctttgcactaggatggca
attatggtcaatgggaggttcaggtgtctcggcagcgtccaacatctgaaaaataggttt
ggagatggttacacaatcgtggtacggatagcagggtccaaccctgacctgaagcctgtc
caggagttcttcggacttgccttcccgggaagtgtcctcaaagagaagcaccggaacatg
ctacagtaccagcttccatcttcactatcttctctggccaggatattcagcatcctttcc
cagagcaaaaagagactccacatagaagactactctgtttctcagacaacgcttgaccaa
gtatttgtaaacttcgccaaggaccaaagtgatgatgaccacttaaaggacttgtcatta
cacaaaaaccagacagtagtcgatgttgcagttctcacatcttttctccaggatgagaaa
gtgaaagaaagttacgtatga
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integrated database retrieval system
