Leptonychotes weddellii (Weddell seal): 102741514
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Entry
102741514 CDS
T08708
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03013
Nucleocytoplasmic transport
lww05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102741514 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102741514 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lww03019
]
102741514 (NUP54)
Messenger RNA biogenesis [BR:
lww03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102741514 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
102741514
NCBI-ProteinID:
XP_006744094
UniProt:
A0A2U3YK52
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All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MAFNFGAPSGTSGTAAATAAPAGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVS
TTSATPFNFGNSLASAGGFGGFGTTSTTAGSAFSFSAPANTGTTGLFGGTQNKGFGFGTG
FGTTTGSSTGLGTGLGTGLGFGGFNTQQQQQQTTLGGLFSQPTQAPTQSSQLINTASALS
APTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPNNK
DEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEVVIYVV
ERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAGVD
PIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQ
TTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPT
QFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDL
EDIKLVEHGLNETIHIRGGVFS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaactttggggctccctcgggcacctctggcaccgctgcagccaccgcggcc
cccgcgggatttggtgggcttgagactgccaactccaccgccagtgggtttaattttggg
ggtttcggattaactgctaatcctgcagtgaactttaatattgggaatttcggtgtttct
accacctcggcgactccgttcaattttggtaacagtctggcaagtgcaggtgggtttgga
ggatttgggacaacatctacaacagcaggttctgcattcagcttttctgctccagctaac
acaggcactactggactcttcggtggtactcagaacaaaggttttggctttggtactggt
tttggcacaacaactggaagtagtactggtttaggtactggtttgggaactggactggga
tttggaggatttaatacacagcagcagcaacagcaaactacattaggtggtctcttcagt
cagcccacacaagctcctacacagtccagccaactgataaatactgcaagtgctctttct
gctccaacgctgttgggagatgagagggacgctattttagcaaaatggaatcagctgcag
gccttttggggcacaggaaaaggatatttcaacaataacattccaccagtggaattcaca
caagaaaatcccttttgccgatttaaggcagtaggatatagttgtatgcccaataataaa
gatgaagatgggctagtggttttagttttcaacaaaaaagaaacagatattcgaagccaa
caacagcagttggtagaatcattacataaagttttgggaggaaaccagacccttactgta
aatgtagagggtattaaaacattgccagatgatcagacagaagttgtcatttatgttgtt
gagcgttctccaaatggtacttcaagaagagttccagctacaacactgtatgcccatttt
gaacaaactaatataaaaacacagttgcagcaacttggtgtaaccctttctatgactaga
actgaactttctcctgcacaaatcaaacaacttttacagaatcctcctgctggtgttgat
cctattatctgggaacaggccaaggtggataaccctgattctgaaaagttaattcctgta
cccatggtgggtttcaaagaacttcttcgaagactgaaggttcaagatcagatgactaag
cagcatcagaccagattagatatcatatctgaagatattagtgaattacagaagaatcaa
actacaactatggccaaaattgcacaatataagaggaaactcatggacctttcccataga
accttacaggtcctaatcaaacaggaaattcagaggaagagtgggtatgccatccaagct
gatgaagagcaactgcgagttcagctagatacaattcagtgtgaactgaatgcacctacc
cagtttaagggccgactaaatgaactgatgtcccaaatcaggatgcagaatcatttcgga
gcagtcaaatctgaggaaagatattacatcgatgcagatctgttacgagaaatcaagcag
catttgaaacaacaacaggaaggccttagccacttgattagcatcataaaagatgaccta
gaagatataaagttggtagaacatggattgaatgaaaccatccacatcagaggtggtgtt
ttcagttga
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