KEGG   Leptonychotes weddellii (Weddell seal): 102741514
Entry
102741514         CDS       T08708                                 
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
  KO
K14308  nuclear pore complex protein Nup54
Organism
lww  Leptonychotes weddellii (Weddell seal)
Pathway
lww03013  Nucleocytoplasmic transport
lww05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:lww00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102741514 (NUP54)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102741514 (NUP54)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lww03019]
    102741514 (NUP54)
Messenger RNA biogenesis [BR:lww03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102741514 (NUP54)
SSDB
Motif
Pfam: Nup54 Nup54_C XhlA
Other DBs
NCBI-GeneID: 102741514
NCBI-ProteinID: XP_006744094
UniProt: A0A2U3YK52
LinkDB
Position
Unknown
AA seq 562 aa
MAFNFGAPSGTSGTAAATAAPAGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFGVS
TTSATPFNFGNSLASAGGFGGFGTTSTTAGSAFSFSAPANTGTTGLFGGTQNKGFGFGTG
FGTTTGSSTGLGTGLGTGLGFGGFNTQQQQQQTTLGGLFSQPTQAPTQSSQLINTASALS
APTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPNNK
DEDGLVVLVFNKKETDIRSQQQQLVESLHKVLGGNQTLTVNVEGIKTLPDDQTEVVIYVV
ERSPNGTSRRVPATTLYAHFEQTNIKTQLQQLGVTLSMTRTELSPAQIKQLLQNPPAGVD
PIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQ
TTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPT
QFKGRLNELMSQIRMQNHFGAVKSEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDL
EDIKLVEHGLNETIHIRGGVFS
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggccttcaactttggggctccctcgggcacctctggcaccgctgcagccaccgcggcc
cccgcgggatttggtgggcttgagactgccaactccaccgccagtgggtttaattttggg
ggtttcggattaactgctaatcctgcagtgaactttaatattgggaatttcggtgtttct
accacctcggcgactccgttcaattttggtaacagtctggcaagtgcaggtgggtttgga
ggatttgggacaacatctacaacagcaggttctgcattcagcttttctgctccagctaac
acaggcactactggactcttcggtggtactcagaacaaaggttttggctttggtactggt
tttggcacaacaactggaagtagtactggtttaggtactggtttgggaactggactggga
tttggaggatttaatacacagcagcagcaacagcaaactacattaggtggtctcttcagt
cagcccacacaagctcctacacagtccagccaactgataaatactgcaagtgctctttct
gctccaacgctgttgggagatgagagggacgctattttagcaaaatggaatcagctgcag
gccttttggggcacaggaaaaggatatttcaacaataacattccaccagtggaattcaca
caagaaaatcccttttgccgatttaaggcagtaggatatagttgtatgcccaataataaa
gatgaagatgggctagtggttttagttttcaacaaaaaagaaacagatattcgaagccaa
caacagcagttggtagaatcattacataaagttttgggaggaaaccagacccttactgta
aatgtagagggtattaaaacattgccagatgatcagacagaagttgtcatttatgttgtt
gagcgttctccaaatggtacttcaagaagagttccagctacaacactgtatgcccatttt
gaacaaactaatataaaaacacagttgcagcaacttggtgtaaccctttctatgactaga
actgaactttctcctgcacaaatcaaacaacttttacagaatcctcctgctggtgttgat
cctattatctgggaacaggccaaggtggataaccctgattctgaaaagttaattcctgta
cccatggtgggtttcaaagaacttcttcgaagactgaaggttcaagatcagatgactaag
cagcatcagaccagattagatatcatatctgaagatattagtgaattacagaagaatcaa
actacaactatggccaaaattgcacaatataagaggaaactcatggacctttcccataga
accttacaggtcctaatcaaacaggaaattcagaggaagagtgggtatgccatccaagct
gatgaagagcaactgcgagttcagctagatacaattcagtgtgaactgaatgcacctacc
cagtttaagggccgactaaatgaactgatgtcccaaatcaggatgcagaatcatttcgga
gcagtcaaatctgaggaaagatattacatcgatgcagatctgttacgagaaatcaagcag
catttgaaacaacaacaggaaggccttagccacttgattagcatcataaaagatgaccta
gaagatataaagttggtagaacatggattgaatgaaaccatccacatcagaggtggtgtt
ttcagttga

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