Leptonychotes weddellii (Weddell seal): 102741999
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Entry
102741999 CDS
T08708
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03082
ATP-dependent chromatin remodeling
lww04714
Thermogenesis
lww05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102741999 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
102741999 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102741999 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lww03000
]
102741999 (ARID1A)
03021 Transcription machinery [BR:
lww03021
]
102741999 (ARID1A)
03036 Chromosome and associated proteins [BR:
lww03036
]
102741999 (ARID1A)
Transcription factors [BR:
lww03000
]
Eukaryotic type
Helix-turn-helix
ARID
102741999 (ARID1A)
Transcription machinery [BR:
lww03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102741999 (ARID1A)
Chromosome and associated proteins [BR:
lww03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102741999 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
102741999
NCBI-ProteinID:
XP_006739618
UniProt:
A0A2U3Y7N3
LinkDB
All DBs
Position
Unknown
AA seq
1630 aa
AA seq
DB search
MGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSR
SGPLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSA
LSPRQPSGGQMHTGMSSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAG
SMNPMGAGGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGM
NRKTQETAVAMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPM
GGTMANNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITK
LYELGGEPERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKN
KKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKI
QPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDA
FPDGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGGMRKAPGSDPFMSSGQ
GPNGGMDPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMGTGAPQPTLMP
SNPDSGMYSPSRYPPQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMD
GTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNA
YPATAAAATERRPAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPIQASAEVAQQ
GTMWQGRNDMTYNYTNRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPP
YGPSAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQ
KAGPPVPASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMM
SLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEY
EVGDPGQRTLLDPGRFSKASSPAPMEGEEEEDLLGPKLEEEEEEEVVENDEEMAFSGKDK
AASESSEEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHI
QTHFESKTELLPTRPHVPCPPVTRKHVTAAEGTPGTTEQEGPPPDGPPEKRITATMDDML
STRSSTLTEEGAKNAEATKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQD
SLAKRCVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEE
EQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCP
SAEAQDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFL
SDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASL
LHMQNPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVI
CDVLFLIGQS
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atggggacagaaggagctctgagccctggagtgagcacatcagggatttccagcagccaa
ggagagcagagtaatccagctcagtctcctttctctcctcatacctcccctcacctgcct
ggcatccgaggcccctccccgtcccctgttggctctcccgccagtgttgctcagtctcgc
tcaggaccactctcgcctgctgcagtgccaggcaaccagatgccacctcggccacccagt
ggccagtcggacagcatcatgcatccttccatgaaccaatcgagcattgcccaagataga
ggttacatgcagaggaacccccagatgccccagtacagttccccccagcccggctcggcc
ttatctccgcgtcagccttcgggtggacagatgcacacaggcatgagctcctaccagcag
aactccatggggagctatggtccccaggggagtcagtacggcccacagggaggctacccc
aggcagccaaactataatgccttgcccaatgctaactaccccagtgcaggcatggccgga
agtatgaaccctatgggtgctggaggtcagatgcatgggcagcctggcatcccaccttat
ggcacactccctccagggagaatgagtcatgcctccatgggcaaccggccttatggccct
aacatggccaatatgccacctcaggttgggtcagggatgtgtcccccaccagggggcatg
aatcggaaaactcaagaaactgctgtcgccatgcatgttgctgccaactctatccaaaac
aggccaccaggctaccccaatatgaatcaggggggcatgatgggaactggacctccctac
ggacaagggattaatagtatggctggcatgatcaaccctcagggacccccgtatcccatg
ggtgggaccatggccaacaattcagcagggatggcagccagcccagagatgatgggcctt
ggggacgtcaagttaactccagccaccaaaatgaacaacaaggcagacgggacacccaag
acagaatccaaatccaagaaatccagttcttctactacaaccaatgagaagatcaccaag
ttgtatgagctgggtggtgagcctgagaggaagatgtgggtggaccgttatctggccttc
acggaggagaaggccatgggcatgacaaatctgcctgctgtgggtaggaaacctctggac
ctctatcgcctctatgtgtctgtgaaggagattggtggattgactcaggtcaacaagaac
aaaaaatggcgggaacttgcgaccaacctcaatgtgggcacctcaagcagtgctgccagc
tccttgaaaaagcagtatatccagtgtctctatgcctttgagtgcaagattgaacgggga
gaagaccctcccccagacatctttgcagctgctgattccaagaagtcccagcccaagatc
caacctccctctcctgcgggatctgggtctatgcaggggccacagacacctcagtcaacc
agcagttccatggcagaaggaggagacctgaagccaccaactccagcatccacaccacac
agtcagatcccccccttgccaggcatgagcaggagcaattcggttgggatccaggatgcg
tttcctgatggaagtgaccccacattccagaagcggaattccatgactccaaaccctggg
taccagcccagtatgaatacctctgacatgatggggcgcatgtcctacgagccaaataag
gatccttatggcggcatgaggaaagctccagggagcgatcctttcatgtcctcggggcag
ggccccaacggtgggatggacccctacagccgagctgccggccctgggctgggaaatgtg
gcgatgggaccgcgacagcactatccctatggagggccttatgacagagtgaggacggag
cctggaataggacccgagggaaacatgggcaccggagccccacagccgactctcatgcct
tccaacccagactcggggatgtactctcccagccgctacccgccgcagcagcagcagcag
cgacatgattcctatggcaatcagttctccactcaaggcaccccttccggcagccccttc
cccagccagcagaccacaatgtatcagcagcagcagcagaattacaaacggccgatggac
ggcacatacggccctcctgccaagcggcacgaaggggagatgtacagcgtgccgtacagc
acggggcaggggcagccccaacagcagcagttgccccccgcccagccccagcctgccagc
cagcagcaagccgcccagccttcccctcagcaagatgtgtacaaccagtatggcaacgcc
tatcctgccacggccgccgctgctactgagcgccgaccagcgggcggcccccagaaccag
tttccattccagtttggccgagaccgtgtctctgcgccccctggctccaatgcccagcag
aacatgccaccgcagatgatgggcggccccatacaagcatcggctgaggtcgctcagcaa
ggcaccatgtggcaggggcgtaatgacatgacctacaattacaccaacaggcagagcact
ggctctgccccccagggccccgcctaccatggcgtgaaccgaacagatgaaatgctgcat
acggatcagagggccaaccatgaaggcccgtggccttcccatggcacacggcagccccca
tatggtccctctgcccccgtgccccccatgacaaggccccctccttccaactaccagccc
ccgccaagcatgcagaatcacattcctcaggtatccagccccgctcccctgccccggcca
atggagaaccgcacctctcctagcaagtctccattcctacactctgggatgaagatgcaa
aaggcaggtcccccggtacctgcctcgcacatagcacctgcccccgtgcagccgcccatg
attcggcgggacatcaccttcccacctggctccgtggaagcaacacagcccgtgttgaag
cagaggaggcggctcacgatgaaagacatcggaaccccggaggcatggcgggtaatgatg
tccctcaagtctgggctgctggcagagagcacatgggcattagacaccattaacatcctg
ctgtatgatgacaacagcatcatgaccttcaacctcagtcagctcccaggtttgctagag
ctccttgtggaatatttccgacgttgcctgatcgagatctttggcattttaaaggagtat
gaggtgggtgacccaggacagagaacactactggaccctgggagattcagcaaggcgtct
agtccagcccccatggagggggaggaagaggaagaccttctaggtcctaaactagaggag
gaagaagaagaggaagtagtggaaaatgacgaggagatggccttctcgggcaaggacaag
gcagcctcagagagtagtgaggagaaactgattagtaagtttgacaagcttccagtaaag
attgtgcagaagaatgacccgtttgtggtggactgctcagataagcttgggcgcgtgcag
gagtttgacagtggcctgctgcactggcggattggtgggggggacaccactgagcatatc
cagacccactttgagagcaagacagagctgctgccgacccggcctcatgtgccctgccca
ccagtcacccggaaacatgtcacagcagcagagggtactccagggacaacagaacaggag
ggccccccacctgatggccctccggagaaacggatcacagccacaatggatgacatgttg
tccacccggtctagcacgttgaccgaggagggagctaagaatgcagaggccaccaaggag
agcagcaagtttccattcggcatcagcccggcacagagccaccggaacatcaagatccta
gaggacgaaccccacagtaaagatgagactccactgtgtacccttctggactggcaggat
tccctcgctaagcgctgcgtctgtgtctccaataccatccgaagcctgtcgtttgtgccc
ggcaacgactttgagatgtccaaacacccggggctgctgctgatcctgggcaagctgatc
ctcctgcaccacaagcacccagagcggaagcaggcaccactgacttacgagaaggaggag
gagcaggaccaaggggtgagctgcaacaaagtggagtggtggtgggactgcttggagatg
ctccgggaaaacaccttggtcacgctcgccaacatctcggggcagttggacctctccccg
taccctgagagcatttgcctgcctgtcctggacggactcctacactgggcagtctgccct
tccgctgaagcccaggaccccttctccaccctgggccccaacgccgtcctctccccccag
agactggtcttggaaaccctcagcaaactcagcatccaggacaacaatgtggacctgatc
ctggccacgccccccttcagccgcctggagaagttgtacagcaccatggtgcgcttcctc
agtgaccgaaagaacccggtgtgccgggagatggccgtggttctgctggccaacctggcg
cagggcgacagcctggcagcccgcgccatcgccgtgcagaagggcagcatcggcaacctc
ctcggcttcctggaggacagccttgctgccacccagttccagcagagccaggccagcctg
ctccacatgcagaacccgcccttcgagccaactagtgtggacatgatgcggcgggctgcc
cgcgcgctgctggccctggccaaggtggacgagaaccactcggagttcacgctgtacgag
tcgcggctgttggacatctcggtatcaccgttgatgaactcattggtttcacaagtcatt
tgtgatgtactgtttttgattggccagtcatga
DBGET
integrated database retrieval system
