KEGG   Leptonychotes weddellii (Weddell seal): 102742091
Entry
102742091         CDS       T08708                                 
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
lww  Leptonychotes weddellii (Weddell seal)
Pathway
lww01524  Platinum drug resistance
lww03430  Mismatch repair
lww05200  Pathways in cancer
lww05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:lww00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    102742091 (MSH2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102742091 (MSH2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    102742091 (MSH2)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    102742091 (MSH2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lww03400]
    102742091 (MSH2)
DNA repair and recombination proteins [BR:lww03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     102742091 (MSH2)
SSDB
Motif
Pfam: MutS_V MutS_IV MutS_II MutS_I MutS_III AAA_27
Other DBs
NCBI-GeneID: 102742091
NCBI-ProteinID: XP_006736893
UniProt: A0A2U3XZS6
LinkDB
Position
Unknown
AA seq 951 aa
MAVQPKETLQLESAAEVGFVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKT
QGVVKYIGPAGTKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKISTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRADFFTKDIYQD
LNRLLKGKKGEQVNSAVLPEMENQVAASALSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQVSDFIKLLVHEKRIEISPPGILYYPPPSDFHAGDLEPNLDRCPVRA
RGLVLIRNFWLCTVIRLNLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQD
CYRLYQGINQLPNVIRALEKYEGKHQSLLLAVFVTPFIDLRSDFSKFQEMIETTLDMDQV
ENHEFLVKPSFDPNLSELREIMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSAQFGYYF
RVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVN
ISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPVILEKGQGKITLKASRHACVE
VQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVS
IVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLA
WAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCD
QSFGIHVAELANFPRHVIECARQKALELEEFQNIRESEGYDDMEPAAKRCYLEREQGEKI
IQEFLSKVKQVPFTEMSEENITMKLKQLKAEVIAKNNSFVNEIISRIKVTT
NT seq 2856 nt   +upstreamnt  +downstreamnt
atggcggtgcagccgaaggaaacgctgcagctggagagcgcggccgaggtcggcttcgtg
cgcttcttccaggccatgccggagaagccgaccaccacggtgcgcctcttcgaccggggc
gacttctacacggcgcaccacgaggacgcgctgctggctgcccgagaagtgttcaagacc
cagggggtagtcaagtacatagggccggcaggaacaaagactctggaaagtgttgtgctt
agtaaaatgaattttgaatcttttgtaaaagatcttcttctagttcgacagtatagagtt
gaagtttataagaatagagctggaaataaggcctcaaaggagaatgattggtatttggca
tttaaggcttctccaggtaatctttctcagtttgaagacattctctttggtaacaatgat
atgtcagcttccattggtgtcgtgggtgttaaaatatctacagttgatggccaaagacag
gtcggagttgggtatgttgactccatacagcggaagctaggactttgtgagttccccgac
aatgatcagttctccaatttggaggctctgctgattcagattggaccaaaggaatgtgtt
ttgccaggaggagagactgctggagacatgggaaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagagctgacttttttacaaaagatatttatcaggac
ctcaaccggttgttgaaaggcaaaaagggagagcaggtgaatagtgctgtcttgccagaa
atggagaatcaggttgcagcttcagcattgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaactttggacagtttgaactgactacttttgacttcagccagtacatg
aagttggatattgcagcagtcagagcccttaaccttttccaggtttcagactttatcaaa
ctgttggtccatgagaagcgcatagaaatttcacccccaggaatattgtactatccgcct
ccaagtgacttccatgctggtgatcttgaaccgaacttagataggtgtccagttagagcc
agaggcttagttttaattagaaatttttggctttgtactgtcataagactgaatttagtg
gaagcttttgtagaagatgcagaattgaggcagagtttacaagaagatttacttcgtcga
ttcccagatcttaaccgacttgccaagaaatttcagagacaagcagcaaacttacaagat
tgttaccgactctatcagggtataaatcaacttcctaatgttattcgggctctggaaaaa
tatgaaggaaaacaccagagtttattgttggcagtttttgtcactccttttattgatctt
cgttctgatttctccaaatttcaggaaatgatagaaacaactttagatatggatcaggtg
gaaaaccatgaattccttgtgaaaccttcatttgatcccaatctgagtgaattaagagaa
attatggatgacttggaaaagaagatgcagtcaacattagtaagtgcagcgagagattta
ggtttggatcctggcaaacagattaaactggattccagtgcacagtttggttattacttt
cgcgtaacatgtaaggaagaaaaagtccttcgtaacaataaaaacttcagtacagtggac
attcagaagaatggtgttaaatttaccaacagtaaactgacttctctcaatgaagagtat
accaaaaataaaaccgagtatgaggaagcccaggatgccattgttaaagaaattgtcaat
atttcttcaggctatgtagaaccaatgcagacgctcaatgatgtgttagctcagctagat
gctgttgtcagctttgcacatgtgtcaaatggagcacctgttccatatgtacgaccggtc
attttggagaaaggacaagggaaaattacattgaaagcatccagacatgcttgtgttgaa
gttcaagatgaagttgcatttattcctaatgatgttcactttgaaaaagataaacagatg
ttccacatcattactggccccaatatgggaggtaaatccacatatattcgccaaactggg
gtgatcgttctcatggcccagattgggtgttttgtgccatgtgagtcagcagaagtgtcc
attgtggactgcatcctggcccgtgtaggggctggcgacagtcagttgaaaggagtctcc
acattcatggctgaaatgctagaaactgcttctattctcaggtctgcaaccaaagattct
ttaataattatagatgaattggggagaggaacctctacctatgatggatttggattagcg
tgggctatatcagagtacatcgcaacaaagattggtgctttttgcatgtttgcaacacat
tttcatgaacttactgccttggccaatcagataccaactgttaataatctacatgtcaca
gcactaactactgaagagaccttaactatgctctatcaggtgaagaaaggtgtctgtgat
cagagttttgggattcacgttgcagagcttgcaaatttccctaggcatgtcatagagtgt
gctagacagaaagctctggaactagaggagtttcagaatatcagagaatcagaaggatat
gatgacatggaaccagcagcaaagaggtgctatctggaaagagagcaaggtgaaaaaatt
attcaggagtttttatccaaggtgaagcaagtgccttttactgaaatgtcagaagaaaac
atcacaatgaagctgaaacagctgaaagctgaggtaatagcaaagaataatagttttgta
aatgaaatcatttcacgaatcaaagttactacatga

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