Leptonychotes weddellii (Weddell seal): 102742091
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Entry
102742091 CDS
T08708
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww01524
Platinum drug resistance
lww03430
Mismatch repair
lww05200
Pathways in cancer
lww05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102742091 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102742091 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
102742091 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
102742091 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lww03400
]
102742091 (MSH2)
DNA repair and recombination proteins [BR:
lww03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
102742091 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_IV
MutS_II
MutS_I
MutS_III
AAA_27
Motif
Other DBs
NCBI-GeneID:
102742091
NCBI-ProteinID:
XP_006736893
UniProt:
A0A2U3XZS6
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MAVQPKETLQLESAAEVGFVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKT
QGVVKYIGPAGTKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKISTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRADFFTKDIYQD
LNRLLKGKKGEQVNSAVLPEMENQVAASALSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQVSDFIKLLVHEKRIEISPPGILYYPPPSDFHAGDLEPNLDRCPVRA
RGLVLIRNFWLCTVIRLNLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQD
CYRLYQGINQLPNVIRALEKYEGKHQSLLLAVFVTPFIDLRSDFSKFQEMIETTLDMDQV
ENHEFLVKPSFDPNLSELREIMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSSAQFGYYF
RVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVN
ISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPVILEKGQGKITLKASRHACVE
VQDEVAFIPNDVHFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVS
IVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLA
WAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCD
QSFGIHVAELANFPRHVIECARQKALELEEFQNIRESEGYDDMEPAAKRCYLEREQGEKI
IQEFLSKVKQVPFTEMSEENITMKLKQLKAEVIAKNNSFVNEIISRIKVTT
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggaaacgctgcagctggagagcgcggccgaggtcggcttcgtg
cgcttcttccaggccatgccggagaagccgaccaccacggtgcgcctcttcgaccggggc
gacttctacacggcgcaccacgaggacgcgctgctggctgcccgagaagtgttcaagacc
cagggggtagtcaagtacatagggccggcaggaacaaagactctggaaagtgttgtgctt
agtaaaatgaattttgaatcttttgtaaaagatcttcttctagttcgacagtatagagtt
gaagtttataagaatagagctggaaataaggcctcaaaggagaatgattggtatttggca
tttaaggcttctccaggtaatctttctcagtttgaagacattctctttggtaacaatgat
atgtcagcttccattggtgtcgtgggtgttaaaatatctacagttgatggccaaagacag
gtcggagttgggtatgttgactccatacagcggaagctaggactttgtgagttccccgac
aatgatcagttctccaatttggaggctctgctgattcagattggaccaaaggaatgtgtt
ttgccaggaggagagactgctggagacatgggaaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagagctgacttttttacaaaagatatttatcaggac
ctcaaccggttgttgaaaggcaaaaagggagagcaggtgaatagtgctgtcttgccagaa
atggagaatcaggttgcagcttcagcattgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaactttggacagtttgaactgactacttttgacttcagccagtacatg
aagttggatattgcagcagtcagagcccttaaccttttccaggtttcagactttatcaaa
ctgttggtccatgagaagcgcatagaaatttcacccccaggaatattgtactatccgcct
ccaagtgacttccatgctggtgatcttgaaccgaacttagataggtgtccagttagagcc
agaggcttagttttaattagaaatttttggctttgtactgtcataagactgaatttagtg
gaagcttttgtagaagatgcagaattgaggcagagtttacaagaagatttacttcgtcga
ttcccagatcttaaccgacttgccaagaaatttcagagacaagcagcaaacttacaagat
tgttaccgactctatcagggtataaatcaacttcctaatgttattcgggctctggaaaaa
tatgaaggaaaacaccagagtttattgttggcagtttttgtcactccttttattgatctt
cgttctgatttctccaaatttcaggaaatgatagaaacaactttagatatggatcaggtg
gaaaaccatgaattccttgtgaaaccttcatttgatcccaatctgagtgaattaagagaa
attatggatgacttggaaaagaagatgcagtcaacattagtaagtgcagcgagagattta
ggtttggatcctggcaaacagattaaactggattccagtgcacagtttggttattacttt
cgcgtaacatgtaaggaagaaaaagtccttcgtaacaataaaaacttcagtacagtggac
attcagaagaatggtgttaaatttaccaacagtaaactgacttctctcaatgaagagtat
accaaaaataaaaccgagtatgaggaagcccaggatgccattgttaaagaaattgtcaat
atttcttcaggctatgtagaaccaatgcagacgctcaatgatgtgttagctcagctagat
gctgttgtcagctttgcacatgtgtcaaatggagcacctgttccatatgtacgaccggtc
attttggagaaaggacaagggaaaattacattgaaagcatccagacatgcttgtgttgaa
gttcaagatgaagttgcatttattcctaatgatgttcactttgaaaaagataaacagatg
ttccacatcattactggccccaatatgggaggtaaatccacatatattcgccaaactggg
gtgatcgttctcatggcccagattgggtgttttgtgccatgtgagtcagcagaagtgtcc
attgtggactgcatcctggcccgtgtaggggctggcgacagtcagttgaaaggagtctcc
acattcatggctgaaatgctagaaactgcttctattctcaggtctgcaaccaaagattct
ttaataattatagatgaattggggagaggaacctctacctatgatggatttggattagcg
tgggctatatcagagtacatcgcaacaaagattggtgctttttgcatgtttgcaacacat
tttcatgaacttactgccttggccaatcagataccaactgttaataatctacatgtcaca
gcactaactactgaagagaccttaactatgctctatcaggtgaagaaaggtgtctgtgat
cagagttttgggattcacgttgcagagcttgcaaatttccctaggcatgtcatagagtgt
gctagacagaaagctctggaactagaggagtttcagaatatcagagaatcagaaggatat
gatgacatggaaccagcagcaaagaggtgctatctggaaagagagcaaggtgaaaaaatt
attcaggagtttttatccaaggtgaagcaagtgccttttactgaaatgtcagaagaaaac
atcacaatgaagctgaaacagctgaaagctgaggtaatagcaaagaataatagttttgta
aatgaaatcatttcacgaatcaaagttactacatga
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