Leptonychotes weddellii (Weddell seal): 102742122
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Entry
102742122 CDS
T08708
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lww03016
]
102742122 (TRUB1)
Enzymes [BR:
lww01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
102742122 (TRUB1)
Transfer RNA biogenesis [BR:
lww03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
102742122 (TRUB1)
Prokaryotic type
102742122 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
102742122
NCBI-ProteinID:
XP_006744813
UniProt:
A0A2U3YMJ7
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MAAAEAAVVSSSSLETDTALVPETAGTAAATAAASPATAAVAAVAAAARTGSEARVSKAA
LATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTL
DSAARGVLVVGIGRGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQE
DIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSLSLQKFQP
PFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDRWTIDDI
AQSLEHCSSLLPAELALKKSKPEESNEQVLSCEYITLSETKGEDDVIKTS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcggcggtggtatcgtcgtcatctttggaaacagacacagccctg
gtccctgaaactgcaggaacagccgcagcaacagccgccgcctcaccagcgacggctgca
gtcgcggccgtcgcggccgctgccagaaccggatccgaagccagggtctccaaggccgct
ttggctactaagctgctgtccctgagcggcgtgttcgccgtgcacaagcccaaagggccc
acttcagccgagctgctgaatcggctgaaggagaagctgttagcagaagctggaatgcct
tctccagaatggaccaaaaggaaaaagcagactttgaaaattggacatggagggacgcta
gacagtgcagcccgaggagttctggtggttggaattggaaggggaacaaaaatgttgacc
agtatgttatcagggtccaagaggtatattgccattggagaactggggaaagctactgac
acgctagattctactgggaaagtaacagaagaaaaaccttacgataaaataacacaagaa
gatattgaaggcattctacagaaatttactgggaatataatgcaggtacctcccctctat
tctgcattaaagaaagatggacagagactttcaaccttgatgaagagaggtgaagtggta
gaagcaaaacctgccaggcccgttaccgtatacagtctctcccttcaaaaattccagcca
ccatttttcacattagatgttgaatgtggaggaggtttttatataagaagcttggtcagt
gacattggcaaagaactctcttcctgtgccaatgtcctagaactgacccgaaccaaacag
ggaccatttacgctagaagagcatgcccttcctgaagacagatggacgattgatgacatt
gcacagtctctggaacattgctcatctcttctcccagcagagttggcacttaaaaaatcc
aaacctgaggagtctaatgaacaagttttgagctgtgaatatataactctaagtgagaca
aagggagaagatgatgtaattaagacatcttaa
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