Leptonychotes weddellii (Weddell seal): 102742253
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Entry
102742253 CDS
T08708
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188 homolog
KO
K14311
nuclear pore complex protein Nup188
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03013
Nucleocytoplasmic transport
lww05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102742253 (NUP188)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102742253 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lww03019
]
102742253 (NUP188)
Messenger RNA biogenesis [BR:
lww03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102742253 (NUP188)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
HEAT_SCC3-SA
TRS130_4HB
Motif
Other DBs
NCBI-GeneID:
102742253
NCBI-ProteinID:
XP_006749042
UniProt:
A0A2U3YZ69
LinkDB
All DBs
Position
Unknown
AA seq
1750 aa
AA seq
DB search
MAAAAGGPCVRSSRELWTILLGRSALRELNQIEAELNKHWQRLLEGLSYYKPPSPNSAEK
VKANKDVASPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQA
LILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVTKYRQQFEEL
YKSEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLALTKMFK
EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDG
LICQDMDRLMLTFGDIPHHAPVLLAWALLRHTLHPEETSSVVRKIGGTAIQLNVFQYLTR
LLRSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDVIDTACEVLADPSLPELF
WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH
KPHDVISHEDGTLWRRQTSKLLYPLGGQTNLRIPQGTVGQVVLDDRAYLVRWEYSYSSWT
LFTCEIEMLLHVVSTADVIQHCQRVRPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL
TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFMAHQVSNMSQMISAEGMNA
GGYGSLLMNSEQPQGEYGVTVAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPGYHK
WRYNSHGVREQIGCLILELIHAILNLCHEADLHGSHSPSLQSLCICSLAYTEAGQTVINI
MGVGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQA
LTQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDA
FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGVWSCLH
AVLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT
LSPPSETSEPSILETCALIMKIICLEIYYVVKGSLDQSLKDTLKKFSSEKRFAYWSGYVK
SLAVHTADTEGSSCTSLVEYQMLVSAWRMLLIIATSHAEVMHLTDRAVRSQLFLDVLDGT
KALLLVPASVNCLRLGSMMCTLLLILLRQWKGELGSADEILGPLTEILEGVLQADQQLME
KTKAKVFSAFITVLQMKEMRVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLMSGGAAE
DKDSMETDDCWRLRHKDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLFTTL
EVSLRMKQNLHFTEASLHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSSNGTVQT
PSTSRKSVDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERTLQCLSAVRTV
QSLACLEEADHTVGFILQLSNFMKEWHFHLPQLMRDVQVSLGYLCQACTSLLHSRKMLQH
CLQSKNGDGIPSAVAPRVQRLPTAAPAPPSCSSSKQPTADTEASEQRALHTVQYGLLKIL
SRTLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVAL
NMLGELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAVRYLRDPAVHPR
DKQRMKQELSSELSTLLSSLSRYFRRGAPSSPAAGVLPSPQGKSSLSKAGPESQEPLIQL
VQAFVRHVQR
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgccggcgggccgtgtgtgaggagcagcagggaactgtggacaattctg
cttggaaggtcagctctgagagaactgaatcagattgaggcagaactgaataaacattgg
cagcggctcttagaggggctgtcctactataaaccacccagtccaaattcagccgaaaaa
gtgaaagctaataaagatgtggcttcaccgttgaaggaactgggtttaagaatcagcaag
tttttgggtcttgatgaagaacagagtgtgcagttactccagtgttaccttcaagaggat
tatagaggtactcgggactcactaaagacggtactgcaagatgagaggcagagccaggcc
ttaatcctgaagattgcagattattactatgaagaaagaacctgtattcttcgttgtgtc
ttacaccttctcacttatttccaagatgaaagacacccctatagggttgaatatgcagac
tgtgttgataaattggagaaggaactagttacaaaatatagacagcagtttgaagagctt
tataaaagtgaagcaccaacatgggagacacatggaaacctcatgactgagcgccaggtg
tctcgctggtttgttcagtgccttcgggaacagtccatgctgctagaaattattttcctt
tattatgcctacttcgagatggcacctagtgacctgttggcattaaccaagatgtttaaa
gagcaaggatttggtagtaggcagaccaacaggcacctagtggatgagaccatggatcct
ttcgtggatcggattggctacttcagtgcccttatcctggtggaaggcatggatattgaa
tccttgcataagtgtgctttggatgacagaagagagctgcaccagtttgcccaggatggg
cttatttgtcaggatatggaccgtttgatgttgacctttggggacattccacatcacgcc
ccagtgcttttggcctgggctctcctccgtcataccctgcatccagaagagacaagcagt
gttgtccggaagataggtggcacagccatccagctgaatgtatttcagtacctgacccga
ctgctccgctcactggccagtgggggaaatgactgtaccaccagcactgcatgcatgtgt
gtctatggactcctttctttcgttctgacctcgctggagctgcacacactgggcaatcag
caggatgtaattgacacagcatgtgaagtcctggcagacccttctcttccagaactattc
tggggaacagagccaacctccgggcttgggatcattctggacagtgtctgtgggatgttc
ccccatctcctgtcccctctcctacagttgctgcgagccctcgtatcagggaagtccact
gccaaaaaggtgtatagtttcttggataagatgtctttctacaatgaactttataagcac
aagccccatgatgtgatctcccatgaagatggaactctctggcggaggcaaacatccaaa
ctcctttatcctcttgggggtcagaccaaccttcgcatacctcagggcaccgtgggccaa
gtagtgctggatgacagggcttacctggtacgctgggagtactcctacagcagctggacc
ctctttacctgcgagattgaaatgctgctgcatgtcgtttccactgcagatgtcatccag
cactgccagcgggtcagacccatcattgatctggtccataaggtcatcagcacagatctg
tccatagcagactgtctcttgcccatcacgtcccgcatctacatgctgctgcagcggcta
acgacagtgatctccccaccagtggacgtcattgcttcttgtgtcaattgcttgactgtt
ttggctgcccggaatccagcaaaggtctggactgatcttcgtcacacaggctttttacca
ttcatggcccaccaggtctccaacatgagtcagatgattagtgcggaggggatgaatgcc
ggagggtacggaagcctcttgatgaacagcgagcagccccagggcgagtacggggtcact
gttgcctttctgcgcttgatcaccactcttgtcaaggggcagctgggaagtacccagagc
caagggctggtgccctgtgtcatgtttgtgctgaaggagatgcttcccggctatcacaag
tggcgttacaactcccatggtgtgagagaacagattggttgcctgatcctggagctgatt
catgcgatcctgaatctgtgccacgaggcagacctacacggcagtcacagccccagcctg
cagtctctctgcatttgcagcctagcctacacagaagcagggcagacagtgatcaatatc
atgggcgtcggtgtggacaccatcgacatggtgatggctgctcagccccgaagtgatggg
gcagagggccaggggcagggccagctgctgatcaagacagtgaaactggcattctccgtc
accaacaatgttattcggctgaaaccgccttctaatgtggtgtcccccctggaacaggct
ctcacacagcatggtgcccatgggaacaacctcattgctgttcttgccaaatacatctac
cacaaacatgatcctgctttaccacgtcttgccatccagttgctgaaacgtctggccacg
gtggccccgatgtcagtatatgcctgcctcggcaacgatgcggctgccattcgagatgcc
ttcctgacccgactgcagagcaagattgaggacatgcgcatcaaagtcatgattctggag
ttcctcacagttgcggtagaaactcagccaggcctcatcgagctgtttctgaatctggag
gtgaaggatggcagcgatggctccaaggaattcagccttggcgtgtggagctgcctccac
gcggtgctggagctgattgattcccagcagcaggaccgctattggtgtccgcccctgctg
catcgggcagccattgccttcctgcacgccctgtggcaggaccggcgggacagtgccatg
ctggtcctcagaaccaaacccaagttttgggagaatttaaccagtccactgtttggaacc
ctttctcctccctcagaaacctctgagcccagcatcctggaaacctgtgccctcatcatg
aagataatttgcttggagatatactatgtagttaagggctcattagatcagtcattaaaa
gatacgcttaagaaattttccagcgagaaacgctttgcctactggtcaggctacgtcaag
tcattggcagttcacacagccgacacagagggcagcagctgcacctccctggtggagtat
cagatgctggtctccgcctggaggatgctcctcatcattgccaccagtcacgcggaggta
atgcacctgacagaccgtgcggtgcgtagccagctctttcttgacgtgcttgatgggacc
aaagccttactactggtgccagcctccgtgaactgcctccgcctcggctccatgatgtgc
actctgctgctcatccttctccggcagtggaagggggagttagggtctgcagatgaaatc
cttgggcccttgacggagattctagaaggagtactgcaggcagaccagcagctcatggag
aagaccaaggccaaggtgttctcggcgttcatcacagtgttgcagatgaaggagatgaga
gtgagtgacatcccccagtactcccagctggtgctgaacgtctgtgagaccctccaagaa
gaggtgattgctctcttcgaccagacccgccatagtctgatgtcgggtggtgctgcagag
gacaaggacagcatggagactgatgactgctggcggctgcggcacaaggaccagcgtgac
ggggtgtgtgtcctgggcctgcacctggccaaggagctgtgtgaggtggatgaggatggg
gactcgtggctccaggtgactcgcaggctccccatcctgcccaccctcttcaccactctg
gaggtgagcctgcgcatgaagcagaacctgcatttcaccgaggcctcgctgcacctgctc
ctcactctggcccgcactcagcagggagccacggcagtagctggagccggcatcacccag
agcatctgtctgcccctcctgagtgtgtaccagcttagctccaacgggacggtgcagacc
cctagcacctctcggaagtccgtggatgccccctcttggccaggggtctaccgcctatcc
atgtctttgatggagcggctcctcaaaactctgcgctacaacttcctgaccgaggccctg
gactttgtgggggttcaccaggagcggaccttacagtgcctcagtgcggtgaggacagtg
cagagcttggcctgcttggaggaggctgaccacacggtgggcttcattctgcagctctcc
aacttcatgaaggaatggcacttccacctgcctcagctgatgcgggatgtccaggtgagc
ctgggctacctgtgccaggcctgcacctccctcctgcacagccgcaagatgctgcagcac
tgcctgcagagcaaaaatggggacggcatcccctcggctgttgccccccgagttcagcgg
ctacccactgctgcccccgcgcccccctcctgctcctcctccaagcagcccactgctgac
acggaggcctcggagcagcgagccttgcacacagtccagtacggactcctcaagatcctc
agcaggaccctggcggccctgcgccacttcaccccggacgtctgtcagatcctgctggat
cagtccctggacctcgccgaatacaacttcctatttgccctgagctttaccacgcccacc
tttgactctgaagtggccccctccttcgggacccttctggccacagtgaatgtggccctc
aacatgcttggagagctggacaagaaaaaggagcccctcacccaggctgtggggctcagc
acacaggcagaagggaccaggacgctgaagtccctcctgatgttcaccatggagaactgc
ttctacctgctcatctcccaggcggtgcgctaccttagggacccagctgtgcatccccgg
gacaaacagcggatgaagcaggagctcagctcggagttgagcacgctgctctccagcctc
tcccgctacttccgccgcggggcgcccagctcccctgctgccggcgtcctgccctcacct
cagggcaagtcctctctctccaaggccggcccggagagccaggagcctctgatccagcta
gtgcaggcctttgtgcggcacgtgcaaagatag
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integrated database retrieval system
