Leptonychotes weddellii (Weddell seal): 102742735 Help Entry 102742735         CDS       T08708                                  Symbol COL11A1 Name (RefSeq) collagen alpha-1(XI) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism lww  Leptonychotes weddellii (Weddell seal) Pathway lww04820   Cytoskeleton in muscle cells lww04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:lww00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     102742735 (COL11A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     102742735 (COL11A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:lww00536]     102742735 (COL11A1) Glycosaminoglycan binding proteins [BR:lww00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102742735 (COL11A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Sod_Fe_N Laminin_G_2 Laminin_G_3 Laminin_G_1 Motif Other DBs NCBI-GeneID:  102742735 NCBI-ProteinID:  XP_030894409 UniProt:  A0A7F8RN17 LinkDB All DBs Position Unknown AA seq 1816 aa AA seqDB search MERWSSRWKTKRWLWNFTITTLALTFLFQAREVRGATLTYDYSALGPNINGQITQLHHSK PHVNCVNNLNATKEKYKEDLAKGNVIIQSAFIKPEDFSILFTIKPKKGIQSFLLSIYNEH GIQQIGVEVGRSPVFLFEDHTGKPAPEDYPLFRTVNIADGKWHRVAISVEKKTVTMIVDC KKKTTKPLDRSERAIVDTNGIMVFGTRILDEEVFEGDIQQLLIIGDPKAAYDYCEHYSPD CDSSVPKAAQAQEPQIDEKKKSNFKKKTRTVATNSKEKSKKFTPPKSEKFASKKKKSSQA AAKAKLGVKANIVDDFQEYSYGTEESYQTEAPRHVSGPNEPNPLEEVFTEEYLTGEDYDS QRKNSEDTLYENKGVDGRDPDLLVDGDLGEYDFYEYKEYEDKPTNPTNEEFGPGVPAETD ITETSINGHGGYGEKGQKGEPAVVEPGMLIEGPPGPAGPAGLMGPPGLQGPTGPPGDPGE RGPPGRPGLPGADGLPGPPGTMLMLPFRYGSDGSKGPTISAQEAQAQAILQQARIALRGP PGPMGLTGRPGPVGGPGSSGAKGESGDPGPQGPRGVQGPPGPTGKPGKRGRPGADGGRGM PGEPGAKGDRGFDGLPGLPGDKGHRGERGPQGLPGPPGEDGMRGEDGEIGPRGLPGEAGP RGLLGPRGTPGPTGQPGIAGVDGPPGPKGNMGPQGEPGPPGQQGNPGPQGLPGPQGPIGP PGEKGPQGKPGLAGLPGADGPPGHPGKEGQSGEKGALGPPGPQGPIGYPGPRGVKGADGV RGLKGSKGEKGEDGFPGFKGDMGLKGDRGEVGQVGPRGEDGPEGPKGRAGPTGDPGPSGQ AGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPTGPRGS RGARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQ RGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKGD PGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGP IGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQGPVGLPGPAGPAGSPGEDGDKGE IGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDGEPGPRGQQGMFGQKGDEGARGF PGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSIGSVGG VGEKGEPGEAGNPGPPGEAGTGGPKGERGEKGEAGPPGAAGPPGAKGPPGDDGPKGNPGP VGFPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQQGPPGPSGEAGPPGPPGKRGPPGAAGS EGRQGEKGAKGEAGAEGPPGKTGPVGPQGPAGKPGPEGLRGIPGPVGEQGLPGAAGQDGP PGPVGPPGLPGLKGEPGSKGEKGHPGLIGLIGPPGEQGEKGDRGLPGTQGSPGAKGDGGI PGPAGPIGPPGPPGLPGPQGPKGTKGSAGPAGQKGDSGLPGPPGPPGPPGEVIQPLPILS PKKTRRHAENMQADAGDNILDYSDGMEEIFGSLNSLKQDIEHMKFPMGTQTNPARTCKDL QLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGS WFSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYTCHQSAAWYDVSAGSYDK ALRFLGSNDEEMSYDNNPYIKALYDGCASRKGYEKTVIEINTPKIDQVPIVDVMINDFGD QNQKFGFEVGPVCFLG NT seq 5451 nt NT seq  +upstreamnt  +downstreamnt atggagcggtggtcctctaggtggaaaacgaaacggtggctctggaatttcaccataaca accctcgcattgactttcctcttccaggctagagaggtcagaggagccaccctgacttat gattatagtgccctgggacctaacattaatggacaaatcacgcaattgcaccacagtaag ccccatgtcaattgtgtgaataacttgaatgccaccaaggagaaatataaagaggacttg gcaaaaggcaatgttataattcagtcagccttcattaagccagaagatttttcaatatta tttacaataaaacccaaaaaaggaattcagtcttttcttttatctatatataatgagcac ggtattcagcaaatcggtgttgaggttgggagatcacctgttttcctctttgaagaccac actggaaaacctgccccagaagactatcccctcttcagaactgttaacatcgctgatggg aagtggcatcgggtagcaatcagtgtggagaagaaaactgtgacaatgattgttgattgt aagaagaaaaccacaaagccacttgatagaagtgagagagcaatcgttgacaccaatgga atcatggtttttggaacaaggattctggatgaagaagtttttgagggggacatccagcaa ctattgatcataggtgaccccaaagccgcatatgactactgtgagcattacagcccagac tgtgactcttcagtgcccaaggccgctcaggctcaggaaccgcagattgatgagaaaaag aaatccaatttcaaaaagaagacgaggacagtggccactaactcaaaggaaaagtccaaa aagtttacaccccctaaatctgaaaaatttgcgtccaagaagaagaaaagttcccaagca gcagcaaaagccaaactaggggtaaaggcaaatatcgttgatgattttcaagaatacagc tatggaacagaggaaagttaccagacagaagctcctaggcatgtatctggaccaaatgag ccaaatccacttgaagaagtatttactgaagaatatctaactggagaggattatgattcc cagaggaaaaattccgaggatacactatatgaaaacaaaggagtagacggcagggaccct gaccttctggtagatggagatttaggcgaatatgatttttatgaatataaagaatatgaa gataaaccaaccaatcccactaatgaagaatttggtccaggtgtgccagcagaaacagat atcacagaaacaagcataaatggccatggtggatatggagaaaaggggcagaaaggagaa ccagcagtagttgaacctgggatgcttattgaaggaccaccaggaccagcaggacctgca ggtcttatgggtccccccggtctacaaggccccactggaccccctggtgaccctggagag aggggtcccccaggacgtcctggcttaccaggggctgatggtctacctggtcctcctggt accatgttaatgctaccgtttcgttatggtagcgatggttccaaaggaccaaccatctct gctcaggaagctcaggcccaggcgattcttcagcaggctcggattgctctgagaggtcca cctggcccaatgggtctaactggaagaccgggtcctgtgggggggcctggttcatctggc gccaaaggtgagagtggtgatccaggtcctcagggccctcgtggtgttcaaggtccgcct ggtccaacgggaaaacctggaaaaaggggtcgtccaggtgctgatggaggaagaggaatg ccaggagaacctggggcgaagggggatcggggatttgatggacttccgggtctgccaggt gacaaaggtcacaggggtgaacggggtccccaaggtcttcctggtcctcctggagaagat gggatgaggggagaagatggagaaataggaccgaggggtcttccaggtgaagctggccca cgaggtctgctgggaccaagggggactccaggacctactgggcagcctggtattgcgggt gtagatggccccccaggaccaaaaggaaacatgggtccccaaggggagcctggacctcca gggcagcaagggaatccaggacctcagggtcttcctggtccacaaggtccaattggtcct cctggtgaaaaaggaccacaaggaaaaccaggccttgcaggacttcctggtgctgatggt cctcctggtcatcctggaaaagaaggccagtctggagaaaaaggtgctctgggtccacct ggtccacagggtcctattggctaccctggtccccgaggagtaaagggagcagatggtgtc agaggtctcaagggatctaaaggtgaaaagggtgaagatggttttccaggattcaaaggt gacatgggtcttaaaggagatagaggagaagttggtcaagtgggtccaagaggagaagat ggccctgaaggacccaaaggtcgagcaggtccaactggagaccctggtccttctggtcaa gcaggagaaaaggggaaacttggtgttccaggattaccaggatatccaggaagacaaggt ccaaagggttccactggatttcctgggtttccaggcgccaatggagagaaaggtgcacgg ggtgtcgctggcaaaccaggccctcggggtcagcgtggtccaacgggtcctcgaggttcg agaggcgcgagaggccccactgggaaacccggcccgaagggcacttcaggtggtgatggc cctccaggccctcctggtgaaagaggccctcaaggacctcagggtccagttggattccct ggaccgaaaggccctcctggtccacctgggaaggatggcctaccaggacaccctggacaa cgtggagagactggatttcaaggcaagactggcccccctgggccagggggtgtcgttgga ccacagggaccaactggcgagactggtcccataggtgaacgaggacatcctggccctccg ggacctcctggtgagcaaggtcttcccggtgctgcaggaaaagaaggtgcaaagggtgac ccaggtcctcaaggtatctcagggaaagacgggccagcaggactacgtggtttcccaggt gaaagaggtcttcctggagctcagggtgcacctggactgaaaggaggggaaggtccccag ggcccaccgggtccagttggctcaccaggagaacgtggatcagcaggtacagctggccca attggtttgccagggcgtccaggcccccagggtcctcctggtccagctggagagaaaggt gctcctggagaaaaaggtccccaagggcccgctgggagagatggagtccaaggccctgtg ggtctcccagggcctgctgggccggcgggctcccctggagaagatggggacaagggtgaa attggtgaaccgggacagaaaggcagcaagggtgacaaaggagaaaatggtcctcctggt cccccaggtcttcaaggtcccgttggtgcccctggcattgctggaggtgatggtgagccg ggtcccagaggtcagcaggggatgtttggacaaaaaggtgatgagggtgccagaggtttc ccaggacctcctggtcccataggtcttcagggtctgccgggcccacctggtgaaaaaggt gaaaatggggatgttggtcccatgggtccacctggtcctccaggcccaagaggcccacag ggtcccaatggagctgatggaccacaaggacccccaggatccattggttcagttggtggt gttggagaaaagggtgaacctggagaagcagggaacccggggcctcctggggaagcgggc acaggtggccccaaaggggaaagaggagagaaaggagaagctggtccgcctggtgctgct ggacctcctggagctaagggaccaccaggtgatgatggcccgaagggtaacccgggtcct gttggttttcctggagatcctggtcctcctggggaacctggccctgcaggtcaagatggt gttggtggtgacaagggtgaagatggagatcctggtcaacagggtcctcctggcccatct ggtgaggctggcccaccaggtcctcctggaaaaagaggtcctcccggagctgcaggttca gagggaagacaaggtgaaaaaggtgctaagggagaagcaggtgccgaaggtcctcctgga aaaactggcccagttggtcctcagggacctgccggaaagcctggtccagagggtcttcgg ggcatccctggcccggtgggagaacaaggtctccctggagctgcaggccaagatggacct cctggtcctgtgggacctcctggcttacctggcctcaaaggtgaacctggctccaagggc gagaagggacatcctggtttaatcggcctgattggtcctccaggagaacaaggtgaaaag ggtgacagaggactccctggaactcaaggatctccaggagcaaagggggatggaggaatt ccaggtcctgctggtcccataggtccacctggtcctccaggcttaccaggccctcaagga ccaaagggtaccaaaggctctgctggacctgctggccagaagggtgacagtggtcttcca gggcctcctgggcctccgggtccacctggtgaagtcattcagcctttaccaatcttgtca cccaaaaaaacaagaagacatgctgaaaacatgcaagcagatgcaggtgataatattctt gattactcggatggaatggaggaaatatttggttccctcaattccctgaaacaagacatc gaacatatgaaatttccaatgggtactcagactaacccagcccgaacttgcaaagacctg caactcagccatcctgacttcccagatggtgaatattggattgatcctaaccaaggatgc tcaggagattccttcaaagtttactgtaatttcacatctggtggtgagacttgcatttat ccagacaaaaaatctgagggagtaagaatatcatcatggccaaaggagaaaccaggaagc tggtttagtgaatttaagagaggaaaactgctttcctatttagatgttgaaggaaattcc attaatatggtgcaaatgacattcctgaaactgctgactgcctccgcccggcaaaacttc acctacacctgtcatcagtcagccgcctggtacgatgtgtcagcgggaagttacgacaag gcacttcggttcctgggatcaaatgatgaggagatgtcctatgacaacaacccttacatc aaagcactgtatgatggctgcgcatccagaaaaggctatgaaaaaactgtgattgaaatc aatacaccgaaaattgatcaagtacctatcgttgatgtaatgatcaatgactttggtgat cagaatcagaagtttggatttgaagttggtcctgtttgtttccttggctaa

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