Leptonychotes weddellii (Weddell seal): 102742903 Help Entry 102742903         CDS       T08708                                  Symbol COL1A1 Name (RefSeq) collagen alpha-1(I) chain   KO K06236   collagen type I alpha Organism lww  Leptonychotes weddellii (Weddell seal) Pathway lww04151   PI3K-Akt signaling pathway lww04510   Focal adhesion lww04512   ECM-receptor interaction lww04611   Platelet activation lww04820   Cytoskeleton in muscle cells lww04926   Relaxin signaling pathway lww04933   AGE-RAGE signaling pathway in diabetic complications lww04974   Protein digestion and absorption lww05146   Amoebiasis lww05165   Human papillomavirus infection lww05205   Proteoglycans in cancer lww05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:lww00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     102742903 (COL1A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102742903 (COL1A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     102742903 (COL1A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102742903 (COL1A1)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     102742903 (COL1A1)   09152 Endocrine system    04926 Relaxin signaling pathway     102742903 (COL1A1)   09154 Digestive system    04974 Protein digestion and absorption     102742903 (COL1A1)  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     102742903 (COL1A1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     102742903 (COL1A1)   09174 Infectious disease: parasitic    05146 Amoebiasis     102742903 (COL1A1)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     102742903 (COL1A1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     102742903 (COL1A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:lww00536]     102742903 (COL1A1) Glycosaminoglycan binding proteins [BR:lww00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102742903 (COL1A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI IL8 Motif Other DBs NCBI-GeneID:  102742903 NCBI-ProteinID:  XP_006740794 UniProt:  A0A2U3YAN9 LinkDB All DBs Position Unknown AA seq 1116 aa AA seqDB search MVARGEAGPQGARGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGA PGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGK RGARGEPGPTGLPGPPGERGGPGSRGFPGADGVSGPKGPAGERGSPGPAGPKGSPGEAGR PGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGA AGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGP SGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGA KGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGP IGPPGPAGAPGDKGEAGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGE PGDAGAKGDAGPPGPAGPTGPPGSIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGP SGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGT PGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGP PGESGREGSPGAEGSPGRDGSPGPKGDRGETGPSGPPGAPGAPGAPGPVGPAGKNGDRGE TGPAGPAGPIGPVGARGPTGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGE QGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGP PGPPSGGFDFSFLPQPPQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSP EGSRKNPARTCRDLKMCHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPHVA QKNWYISKNPKDKRHVWYGESMTDGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITY HCKNSVAYMDQQTGNLKKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGAWGKTVIE YKTTKTSRLPIIDVAPLDVGAPDQEFGMDVGPVCFL NT seq 3351 nt NT seq  +upstreamnt  +downstreamnt atggtagccaggggtgaagctggtccccaaggagcccgtggctctgaaggtccccagggt gtgcgtggtgagcccggcccccctggccctgctggtgctgctggtcctgctggaaaccct ggtgctgacggacagccgggtgctaaaggtgctaatggcgctcctggcattgctggtgct cccggcttccctggtgcccgaggcccctctggaccccagggccccagcggtcctcctggt cccaagggtaacagcggtgaacctggtgctcctgggaacaaaggagacactggcgccaag ggagagcccggccccactggtattcaaggcccccctggccctgccggggaagaaggaaag cgaggagcccgaggtgaacctggacccactggcctgcccggaccccccggcgagcgtggg ggccctggtagccgtggtttccctggggcagacggcgtctctggtcccaagggccccgct ggtgaacgtggttcccccggccccgctggccccaagggttctcctggtgaagctggtcgc cctggtgaagctggtctgcctggtgccaagggtctgactggaagtcccggcagtcccggt ccagatggcaaaaccggcccccctggtcccgctggtcaagatggtcgccccggaccccca ggcccccccggtgcccgtggtcaggctggtgtgatgggattccctgggcctaaaggtgct gctggagagcctggcaaggccggagagcgaggtgtgcctgggccccctggtgctgttggt cctgctggcaaagacggagaagctggagctcagggagcccccggccctgctggccccgct ggtgagagaggtgaacaaggccccgctggctcccccggattccagggtctccctggcccc tctggtcctcccggtgaagcaggcaaacccggtgaacagggtgttcctggcgaccttggc gcccccggcccctctggagcaagaggcgagagaggtttccccggtgaacgcggtgtgcaa ggcccccccggccccgcaggtccccggggagcgaacggcgcccctggcaatgacggtgct aagggtgatgctggcgcccccggagccccaggtagccagggcgctcctggccttcaggga atgcccggtgaacgaggcgcagctggtcttcccggccctaagggtgacagaggcgatgct ggtcccaaaggtgctgatggttctcctggcaaggatggtgtccgtggtctgactggcccc attggtcctcctggccccgctggtgcccctggtgacaagggtgaagctggtccgagcggc cctgctggtcccactggagctcgtggtgcccccggagaccgtggtgagcctggtcccccc ggccctgctggcttcgccggcccccctggtgccgacggccaacccggtgctaaaggcgaa cccggtgatgctggtgctaaaggcgacgctggtccccctggccccgccggccccactggc ccccctggctccattggtaacgttggtgctcctggacccaaaggtgctcgtggcagtgcc ggtccccctggtgctactggttttcctggtgctgctggccgagtcggcccccccggcccc tctggaaatgctggaccccctggccctcctggccctgctggcaaagaaggcggcaaaggc ccccgtggtgagaccggccccgccggacgtcccggtgaagtcgggccccccggtcccccc ggccccgctggcgagaagggatcccctggtgctgatggacctgctggtgctcccggcact cccggacctcaaggcattgctggacagcgtggtgtggtgggcctgcccggtcagcgagga gagagaggcttccccggtcttcccggcccttctggtgaacctggcaaacaaggtccttct ggagcaagcggtgagcgtggcccccctggtcccatgggcccccctggattggctggaccc cctggcgagtctggacgtgagggatctcctggtgctgaaggttcccccggacgagatggt tctcctggccccaagggtgaccgtggtgagactggcccttctggaccccctggtgctcct ggtgctcctggtgcccctggccccgttggccctgctggcaagaatggcgaccgtggcgag actggtcctgctggtcctgccggcccgatcggccccgttggtgctcgtggtcccactgga ccccaaggtccacgtggtgacaagggtgagacaggcgaacagggtgacagaggcataaag ggtcaccgtggcttctctggtctccagggtccccctggtcctcctggctctcctggtgaa caaggtccttctggagcttctggtcctgctggtccccgaggtccccccggctctgctggt tctcctggcaaagacggactcaacggtctcccaggccccatcggcccccctggtcctcgt ggtcgcactggtgatgctggtcctgttggtccccccggccctcctggaccccctggtccc cccggtcctcccagcggcggtttcgacttcagcttcctgccccagccacctcaagagaag gctcacgatggcggccgctactaccgggctgatgatgccaacgtggtccgtgaccgtgac ctcgaggtggacaccaccctcaagagcctgagccagcagatcgagaacatccggagccct gaaggaagccgcaagaacccagcccgcacctgccgcgacctcaagatgtgccactccgac tggaagagcggagaatactggattgaccccaaccaaggatgcaacctggatgccatcaag gtcttctgcaacatggagacaggcgagacctgcgtgtaccctactcagcctcatgtggcc cagaagaactggtacatcagcaagaaccccaaggacaagaggcacgtctggtacggcgag agcatgactgacggattccagttcgagtatggtggccagggctccgatcctgccgatgtg gccatccagctgacgttcctgcgcctgatgtccaccgaggcttcccagaacatcacctac cactgcaagaacagcgtggcctacatggaccagcagactggcaacctcaagaaggccctg ctcctccagggctccaacgagattgagatccgggccgagggcaacagccgcttcacctac agcgtcacctacgacggttgcacgagtcacaccggagcctggggcaagacagtgatcgaa tacaaaaccaccaagacctcccgcttgcccatcatcgatgtggcaccattggacgttggc gccccagaccaggaattcggcatggatgttggccctgtctgcttcttgtaa

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