Leptonychotes weddellii (Weddell seal): 102742928
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Entry
102742928 CDS
T08708
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lww03009
]
102742928
03012 Translation factors [BR:
lww03012
]
102742928
Enzymes [BR:
lww01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102742928
5.6.2.5 RNA 5'-3' helicase
102742928
Ribosome biogenesis [BR:
lww03009
]
Eukaryotic type
Other ribosome biogenesis factors
102742928
Translation factors [BR:
lww03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
102742928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
R3H
AAA_30
AAA_19
SMUBP-2_HCS1_1B
zf-AN1
Viral_helicase1
DEAD
nSTAND3
ResIII
IstB_IS21
AAA_16
SLFN-g3_helicase
AAA_22
UvrD-helicase
Helicase_RecD
AAA_25
Flavi_DEAD
AAA
PhoH
DnaB_C
ABC_tran
Zot
NPHP3_N
UvrD_C_2
AAA_33
NTPase_1
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
102742928
NCBI-ProteinID:
XP_030875565
UniProt:
A0A7F8Q2Q7
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
TGDIVGLYDEGSQLATGILTRITQRLVTVAFDESHDFQLSLDREQAYRLLKLANDVTYKR
LKKALLTLKKYHSGPAFSLIEVLFGGSAPSPASEIQPPPFCNTSLDASQKEAVSFALSQK
ELAIIHGPPGTGKTTTVVEIVLQAVRQGLKVLCCAPSNVAVDNLVERLARCKQRVLRLGH
PARLLESIQQHSLDAVLARSDSAQIVADIRKDIDQAFAKNRQTQDKREKSSVWSEIKLLR
KELKEREEAAMLESLLSAAVVLATNTGASSDGPLKLLPDGHFDVVVIDECAQALEASCWI
PLLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLLERLVQERGTCAVRMLRVQYRMHEA
IMRWASDTLYHGQLTAHPSVAGHLLRDLPGVAATEETSIPLLLVDTAGCGLFELEEEDDQ
SKGNPGEVRLVSLHIQALVDAGVRASDIALITPYNLQVDLLRQSLAHRHPELEIKSVDGF
QGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVVCDSHTVSKHTFLKTLV
DHFAEHGAVRTAFEYLDDIIPENYSHKSSQGHGRAGAKPHGSAALARKPPGGRPREGAQE
ARAAEGLERRRSGGQPSGPEVPSQPRLHGGSPEGAGSGDRAEHFRAKIAEFVASEKTQLE
FPASLNSHDRMWIHQIAEEHGLRHDSTGEGKKRFITVSKRAPPAPPALQRPAGTGSQAPV
GPTAPSPTQSKPPLGEQSSQDPLNLKALHLERLQREKSRRERPAKEGPAKEGQQASCSGP
RTLAEKKKKKEAKGHAAVDLPGEEDFEALVAAAIKADNTCGLAKCTASVVTVGQLCLHCG
RRFCLSHHLPEIHGCGERARAHARQRISRDGVLYAGSGTKDRSLDPAKRAQLQRRLGKKL
DELTSQRKSKRKEKEK
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
acaggcgatatagtgggtctgtatgacgaagggagtcagctggccacggggatcctgacc
cggatcacgcagagattggtcacggtggcctttgacgagtcccacgacttccagctgagc
ttggaccgggagcaggcctacagactgttaaaacttgccaatgatgtcacttacaagcga
ctgaaaaaggctctgctcaccctaaagaagtaccattctggccccgcgttctcactcata
gaggtcctctttggtggatcagcccccagtcctgcaagtgagatacagccgccgccgttc
tgtaacacttccctggatgcctcccagaaggaagcggtctccttcgcgctgtcgcagaaa
gagcttgccatcatccatgggcctcctggcactgggaagaccaccaccgtggtcgagatc
gttctgcaggctgtgaggcaggggttaaaggttctgtgctgtgctccctctaacgtggcc
gtggacaatctggtagagcgtctggctcggtgtaagcagagagtcctgcgcctcgggcac
cctgcccgcctgctggagtccattcagcagcattccctcgacgcggtgttagcacggagt
gacagcgcccagattgtcgcggacatcaggaaggacatcgatcaggcctttgcgaagaac
aggcagacccaggataagagagagaagagtagtgtttggagtgaaatcaagctgttgagg
aaggagctgaaggagagggaagaggctgcgatgctggagagcctcctgtcagcagccgtg
gtgctggcgacaaacacaggtgcttcttccgacggccctctgaagctgctgcccgacggc
cacttcgacgtggtggtcatcgacgagtgcgcccaggccctggaagccagctgctggatc
cccctgctgaaggccaggaagtgcatcctggctggagatcacaagcagctgccccccacc
acggtctcccacaaggctgccctggcggggctgtcgctgagcctgctggagcgcctggtg
caggaacgcggcacgtgtgcggtgcggatgctgagggttcagtaccgcatgcacgaggcc
atcatgcgctgggcctcggacaccctgtaccacgggcagctcacggcccacccttccgtg
gctgggcacctcctacgggacctcccaggagtggctgccacggaggagaccagcatcccc
ctgctgcttgtggacacggccggctgcgggctgtttgaactggaagaggaggacgaccag
tctaaggggaaccctggtgaagtgcgcctcgtcagtctgcacatccaggccctggtggac
gctggtgtccgagcgagtgacatcgccctcattacgccatacaacctccaggtggacctg
ctcaggcagagccttgcccacaggcaccccgagcttgaaattaagtccgtcgatggcttc
caaggccgagagaaggaggccgtggtcctgtccttcgtcagatccaataggaaaggcgag
gtgggcttccttgccgaggaccggcggatcaacgttgccgtcacccgcgcacggcgccac
gtggcggtcgtgtgtgattctcacaccgttagcaagcacaccttcttgaagaccctggtg
gatcacttcgcggagcacggggcagtgcgcacagcctttgagtatcttgacgacatcatc
cctgaaaactactcccacaagagttcccagggccacggccgagctggcgcgaagccccac
ggctctgcggcgttggccaggaagcctcctgggggccggccgcgggagggggcccaggag
gccagagcagctgaggggctggagcggaggaggtcgggtgggcagccctcgggccctgag
gtcccttctcagcccaggctccacggaggcagcccagagggagcggggagcggagaccgt
gcagaacacttcagggccaagatcgccgagtttgtggcgagtgagaaaacccagttggag
tttcctgcttccctgaactcccacgacaggatgtggatccaccagatagccgaagagcat
gggctgaggcatgacagcactggggaagggaagaagaggttcatcaccgtaagcaagaga
gccccgcccgccccgccagccctacagcgtccagcagggaccggcagccaagcccctgtc
gggcccacggcccccagccccacacagagcaagccccctcttggggagcagagcagtcag
gaccccctgaatctgaaggccctgcacctggaaaggctgcagagggagaagagcaggcgg
gagcggccagccaaggaggggccggccaaggaggggcagcaggcctcgtgctccgggccg
cgcacgttagcagagaagaagaagaagaaagaagcaaaaggacacgcggctgtagatttg
cccggtgaggaggacttcgaggccctggtcgcggccgccatcaaggctgataacacgtgc
ggcctcgctaagtgcacggccagcgtcgtgactgtgggccagctctgtctgcactgcggc
cgccgcttctgcctcagccaccacctgcccgagatccatggctgtggggagagggctcgt
gcccacgcccggcagagaatcagccgggacggagtcctctacgccggcagtgggaccaag
gacaggtccctggacccagccaagagggcccagctccagaggaggctgggtaagaagctg
gatgagctgaccagccagaggaagagtaaacggaaggagaaggagaagtga
DBGET
integrated database retrieval system
