Leptonychotes weddellii (Weddell seal): 102743150
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Entry
102743150 CDS
T08708
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent rRNA helicase SPB4-like
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lww03009
]
102743150
Enzymes [BR:
lww01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102743150
Ribosome biogenesis [BR:
lww03009
]
Eukaryotic type
90S particles
Helicases
102743150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
40S_SA_C
Ribosomal_S2
Helicase_C_2
CHASE3
PAS_11
Motif
Other DBs
NCBI-GeneID:
102743150
NCBI-ProteinID:
XP_030879941
UniProt:
A0A7F8QGV8
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MIDTLRYSVMTRKAGTKDECEKIVESGAKKVAMDQIKIAANNVQEEVGRSKTDLTYFRVL
PRPGPFQKARSNAVHMLLLAGSSLHPWATFRRQLLERGELMVSESLPRALGSDLDNGSVS
SDLKHEAERINNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTVNA
IIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELH
QKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVY
NDFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARNLEFWYTADK
VAPNLTSIYKRKSNGIYIINLKRTWEKLLPASQAIGSPVDVSVIGSRNTGQLAVLKFVTV
TRATHIAGHFTPGTFTNQILEALXELRLLVITDSWADHQPLTEASCVNVPMLLCVTRTSL
CYVDAAIPYNNXGAHSVGRMRRMLAQEVLXMHGTFSCEHPQKVMPDLSFYRNPEEIEKEE
XATVEKAVTKEEFQGEWTTAAPRFTATQPEVADWSEGVQVPSVTIQQFPTDDWRAQPATE
DWSAAPMAQATEWVATTTEWP
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgattgatactttacgctattccgtaatgacacgcaaagctggcacaaaagatgaatgt
gaaaaaatagtagaaagtggggctaaaaaggtagccatggaccagattaaaatagcagcc
aataatgtgcaggaagaggtcgggagatccaagacagaccttacctatttcagagttctg
cctagaccaggcccctttcaaaaagccaggtccaacgctgtgcatatgctgctgcttgct
ggaagttctctccatccctgggctacattcaggagacaacttctagaacgtggagagctc
atggtgtcagagagcctccccagggctctgggttctgacttagataatggcagtgtttcc
agtgatctgaaacatgaagctgagaggatcaataacataaatatacttgtttgcactccg
ggtcggcttcttcaacatatggatgaaacaatatgttttcatgctaccaatctccaaatg
ttagttcttgatgaagcagatagaatcttggatatgggctttgctgataccgtgaatgct
attattgaaaatcttcccaagaaacggcagactttacttttctcagctacacaaaccaag
tctgtaaaggaccttgcacgcctaagtttgaaaaaccctgagtatgtgtgggttcatgaa
aaagcaaaatacagcacccctgccactttggaacagaactacatagtttgtgagctgcac
caaaaaataagtgtattatattcctttttgagaagccacttgaagaagaaaagtattgta
tttttctccagttgtaaagaggttcagtatctgtaccgagtgttctgccggctacgtcct
ggcatctctatacttgccctgcacggccgccagcagcagatgagaaggatggaagtctac
aacgactttgtccgcaagagagctgctgtgctctttgctactgatattgctgccaggggg
ctggatttcccagctgtgaattgggttcttcagtttgattgtccagaggatgccaacaca
tatattcacagagcaggtagaactgccaggaatctggaattctggtacacagcagacaaa
gtggcaccaaacttgacttcgatctacaaaaggaaaagcaatggcatctacatcataaat
ctgaagagaacctgggagaagcttctgccagcatctcaggctattggaagcccagttgat
gtaagtgtcataggctccaggaatactggccagctggctgtgctgaagtttgtgactgtc
accagagccactcatattgctggccacttcacacctgggacattcactaaccagatcctg
gaagccctctaggagctgagacttctggtgattactgattcctgggctgaccaccagcct
ctcacagaggcatcttgtgttaacgtgcctatgttgctctgtgtaacacggacttctctg
tgctatgtggatgctgccatcccatataataacnaaggagctcactcagtgggtcggatg
aggcggatgctggcccaggaagttctgncaatgcatggcacattctcctgtgagcaccca
cagaaggtcatgcctgatctctccttctacagaaatcctgaagagattgaaaaggaagag
taggccactgttgaaaaagctgtgaccaaggaggaatttcagggtgaatggactactgca
gctcccagatttactgctactcaacctgaggttgcagactggtctgaaggtgtgcaggtg
ccctctgtgactattcagcagttccccactgacgattggcgcgctcagcctgccactgaa
gactggtctgcagctcccatggctcaggccactgaatgggtagcaacaaccaccgagtgg
ccctaa
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