Leptonychotes weddellii (Weddell seal): 102743354
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Entry
102743354 CDS
T08708
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lww04131
]
102743354 (LINGO1)
Membrane trafficking [BR:
lww04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
102743354 (LINGO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
102743354
NCBI-ProteinID:
XP_006748228
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MLAGGARSMPSPLLACWQPILLLVLGSVLSGSASGCPPRCECSAQERAVLCHRKRFVAVP
EGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFSLRTLGL
RSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRA
FSGLNSLEQLTLEKCNLTSIPTEALSHLHSLIVLRLRHLNINAIRDYSFKRLYRLKVLEI
SHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSM
LHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESAFHSVGNLETLIL
DSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARI
RDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRY
AQVQDNGTYLCIAANAGGNDSMPAHLHVRSYSPDWPHQPNKTFAFISNQPGEGEANSTRA
TVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGI
SSADAPRKFNMKMI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgctggcggggggtgcgaggagcatgcccagccccctcctggcctgctggcagcccatc
ctcctgctggtgctgggctcggtgctgtcaggctcggcctccggctgcccgccccgctgc
gagtgctcggcccaggagcgggccgtgctctgtcaccgcaagcgcttcgtggcggtccct
gagggcatccccaccgagacccgcctgctggacctgggcaagaaccgcatcaagacactc
aaccaggacgagttcgccagcttcccgcacctggaagagctggagctcaacgagaacatc
gtgagcgctgtggagcccggcgccttcaacaacctcttcagcctgcggacgctggggctg
cgcagcaaccggctgaagctcatccccctgggcgtcttcacgggcctcagtaacctgacc
aagctggacatcagcgagaataagatcgtcatcctgctggactacatgttccaggacctg
tacaacctcaagtcgctggaggtcggcgacaatgacctcgtctacatctcccaccgggcc
ttcagcggcctcaacagcctggagcagctgacgctggagaaatgcaacctgacctccatc
cccaccgaggcgctgtcccacctgcacagccttatcgtcctgaggctccggcacctcaac
atcaacgccattcgggactactccttcaagaggttgtaccggctcaaggtcttggagatc
tcccactggccctatttggacaccatgacacccaactgcctctatggcctcaatctgacc
tccctgtccatcacccactgcaacctgactgccgtgccctacctggccgtgcgccacctg
gtctatctccgcttcctcaacctctcctacaatcccatcagcaccatcgagggctccatg
ttgcatgagctgctgcggctgcaggagatccagctggtgggtgggcagctggccgtggtg
gagccctacgccttccgcggcctcaactacctgcgcgtgctcaacgtctcgggcaaccag
ctgaccaccctggaggagtcggccttccactcggtgggcaacctggagacgctcatcctg
gactccaacccgctggcctgcgactgccggctcctgtgggtgttccggcgccgctggcgg
ctcaacttcaaccggcagcagcccacgtgcgccacgcccgagttcgtccagggcaaggag
ttcaaggacttccccgacgtgctcctgcccaactacttcacctgccgccgcgcccgcatc
cgggaccgcaaggcgcagcaggtgttcgtggacgagggccacacggtgcagttcgtgtgc
cgggcggacggtgacccgccgcccgccatcctctggctctcgccccgcaagcacctggtt
tcggccaagagcaatgggcggctcacagtcttccccgacggcacgctggaggtgcgctac
gcccaggtgcaggacaacggcacgtacctgtgcatcgcggccaacgcgggcggcaacgac
tcgatgccggcccacctgcacgtgcgcagctactcgcccgactggccccatcagcccaac
aagaccttcgctttcatctccaaccagccgggtgagggagaggccaacagcacccgagcc
accgtgcctttccccttcgacatcaagaccctcatcatcgccaccaccatgggcttcatc
tctttcctgggcgtcgtcctcttctgcctggtgctgttgttcctctggagccgaggcaag
ggcaacacgaagcacaacatcgagatcgagtacgtgccccgcaagtcggacgcgggcatc
agctccgccgacgcgccccgcaagttcaacatgaagatgatctga
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