Leptonychotes weddellii (Weddell seal): 102743756
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Entry
102743756 CDS
T08708
Symbol
CDK5RAP1
Name
(RefSeq) CDK5 regulatory subunit-associated protein 1 isoform X2
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lww03016
]
102743756 (CDK5RAP1)
Enzymes [BR:
lww01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
102743756 (CDK5RAP1)
Transfer RNA biogenesis [BR:
lww03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
102743756 (CDK5RAP1)
Prokaryotic type
Methylthiotransferases
102743756 (CDK5RAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-GeneID:
102743756
NCBI-ProteinID:
XP_006727553
UniProt:
A0A2U3X861
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MHPLQCVLQTQRWGPLASVSWLLLRTCRAHSSVPSTACPSSERQQEDGVRKDFSSRLASG
PTFQHFLRSASAPQEKPDMEDPPPYLTVDELLGRQRKVYLETYGCQMNVNDTEIAWSVLQ
KSGYLRTRNLQEADVILLVTCSIREKAEQTIWNRLHQLKALKTKRLRSQVPLRIGILGCM
AERLKEEILNREKMVDILAGPDAYRDLPRLLAVAESGQQAANVLLSLDETYADIMPVQTS
PSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILEEVRKLSEQGLKEVTLLGQNV
NSFRDSSEVQFNNAVSTNLSRGFSTNYKPKQGGLRFAHLLDQVSRVDPEMRIRFTSPHPK
DFPDEVLQLIHERDNICKQIHLPAQSGSSRVLEAMRRGYSREAYVELIHHIRESIPGVSL
SSDFIAGFCGETEEDHLQTVSLLREVQYNMGFLFAYSMRRKTRAYHRLKDDVPEEVKLRR
LEELITVFREEATKANMASVGCTQLVLVEGHSKRSATDLCGRNDGNLKVIFPDVEMEDVN
NSEVKVRAQPGDYVLVKITSTSSQTLKGHVLCRTTLKDSSAYC
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctttgcagtgtgtcctgcaaacacagaggtgggggcccttggcttctgtgtcc
tggctgctgctcaggacctgcagggcacatagtagtgtccccagcactgcatgtcccagt
tcagagaggcagcaggaagatggagttcggaaggatttcagctctaggctggccagtggg
ccgacttttcagcattttttaagaagtgcttcagctcctcaagagaaaccagacatggag
gacccacccccctatcttacagtggatgaacttttagggaggcaaagaaaagtctatctg
gagacctacggctgccagatgaatgtgaatgacacagagatagcctggtctgtcttacag
aagagtggctacttgcggaccaggaacctccaagaggctgatgtgatcctccttgtcaca
tgttctatcagggagaaggctgagcagaccatctggaatcgtttacatcagcttaaagct
ctgaagacgaaacggctccgctcccaagtacctctgaggattgggattctaggctgcatg
gctgagagattaaaggaggagattctcaacagggagaaaatggtggatattttggctggt
ccagatgcctatcgggaccttcctcgactgctggctgttgctgagtcaggccaacaagct
gccaacgtgctgctctctctggatgagacctatgccgacatcatgccagtccagacaagc
cccagtgctacttctgcctttgtgtctatcatgcgaggctgtgacaacatgtgcagctac
tgcattgttcctttcacacgtggccgggagaggagtcgccctgttgcttccattctagag
gaagtgaggaagctttcagagcaggggctgaaagaagtgacacttcttggtcagaatgtt
aatagttttcgggacagttcggaagtccagttcaacaatgcagtgtctactaacctgagc
cgtggcttttctaccaactataaacccaagcaagggggccttcgttttgctcaccttctg
gatcaggtctccagagtagatcctgaaatgaggatccgtttcacctctccccaccccaaa
gactttcctgatgaggttctacagctgattcatgagagagacaacatctgtaagcagatc
cacctaccagcccagagtggaagcagccgtgtattggaggctatgcggaggggatattca
agagaagcttatgtggagttaattcatcatatcagagaatctatcccaggagtgagcctc
agcagcgatttcattgctggcttttgtggtgagacggaggaagatcacctccagacagtg
tctttgcttcgggaagttcaatacaacatgggctttctttttgcttacagtatgagacgg
aagacccgggcatatcacaggctgaaagatgatgtcccagaagaggtaaaattaaggcgt
ttggaggaacttattactgtctttcgagaagaagcaacaaaagccaacatggcctctgtg
ggttgtacccagctagtgctggtggaggggcacagtaaacgctctgcaactgatctgtgt
ggccggaatgatggaaaccttaaagtgatcttccctgatgtagaaatggaggacgttaat
aactctgaggtcaaggtcagagctcagcctggggactatgtgctggtgaagatcacgtct
accagctctcagacacttaaaggacatgttctctgcaggacaaccctgaaggactcctca
gcatattgctga
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