Leptonychotes weddellii (Weddell seal): 102744149
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Entry
102744149 CDS
T08708
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
102744149 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lww04131
]
102744149 (SCARF1)
Membrane trafficking [BR:
lww04131
]
Endocytosis
Phagocytosis
Scavenger receptors
102744149 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_PEAR1L
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
102744149
NCBI-ProteinID:
XP_030892723
UniProt:
A0A7F8RIY3
LinkDB
All DBs
Position
Unknown
AA seq
778 aa
AA seq
DB search
MGLRLLPLLLLWTQGTQGSKLDPNGRHVCMASSPSAELQCCPGWRQKDQECTVPICEGVD
ACQEDEVCVKPGLCRCKPGFFGAQCNSRCPGQYWGPDCREICACHPHGQCEPATGVCHCL
ADRWGGRCEFACACGPHGRCDPATGACRCEPGWWSSTCRRPCQCNPAAARCDPTDGSCRC
EPGPWMLSSVPGGLGGDSFCPLCSAPMTPPLPSCGHCKQKEPCSADTGSCASCEPGWNGT
QCHQPCPAGTFGESCRQPCPHCRLGEACQPDTGHCQHCEPGRLGPRCEEPCPTGTFGDGC
SSTCPTCVQGTCDAVTGECVCHAGYWGPSCNTSCPPGFHGSNCSDPCECPEGPCTPISGA
CQLGPRSQDAALIAGILVPLLLLLLGIIFCVCCCRAARLDPKDRPASDGAAVSRMKLQVW
GALSSLGSVLPCGSFSSHKLPWVTVSHHDPEIPFNHSFIEPPSAGWASDDSFSSDPESGE
DESPAYCVPPQEGMVTVAHGEFPEASLAGGPIPPPEDASTPFPIPRTSSLARAKRPSVSF
AEGTKFAPQSRRSSGEISSPLRKPKRLSRGAQLGPESQEAEESMGSEKAEMDETLPGAAS
PRDSATGRRRLPLGGRTVAERVEAIEGSVLEGSGSVTTIYMLAGTPQLSEGPVRSVLRRF
GSFQKGQAEPKVKSAIPKPPRRALSRNKGSPGLASGSASQSPSLAPNDELTRPLESAGTG
PEEVARGLGDGTKSSGRAQELAPEGGPQEQDPQKLADGEGQEEPQYENVAPISGPPAP
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggggctgaggctgctcccactgttgctgctctggacacaggggacccaggggtccaag
ctggaccccaatgggcggcatgtctgtatggccagcagcccctctgctgagctccagtgc
tgcccaggctggaggcagaaagatcaagaatgcaccgtccccatctgtgagggggtagat
gcctgccaggaagatgaagtatgtgtgaaaccaggcctctgtcgatgcaaacctggattc
ttcggggcccagtgcaactcccgctgcccgggccagtactggggccccgactgccgtgag
atctgtgcgtgccacccacacggccagtgcgagccggccacaggcgtgtgccactgccta
gcggaccgctggggcggccgatgcgagttcgcgtgcgcctgcggcccccacgggcgttgc
gaccccgcgacgggcgcgtgccgctgcgaacccggctggtggtcgtccacttgccgccgt
ccgtgccagtgcaacccggcggcggcgcgctgcgatccaaccgacggctcctgccgctgc
gagccggggccctggatgctctccagtgtccctggaggcctgggtggggactcgttctgt
ccgctctgcagtgctcccatgactcctcctcttcccagctgtggccactgcaagcagaag
gagccatgctctgcagacacaggcagctgtgcgtcctgcgagccaggctggaacggaacc
cagtgccaccagccctgcccagctggcacctttggcgagagctgcaggcagccgtgcccc
cactgccggcttggggaggcctgtcagccagacaccgggcactgtcagcactgtgagcct
gggcggctggggcccaggtgtgaagagccctgcccgaccgggacctttggggatggctgt
agctccacctgccccacctgtgttcaggggacctgtgatgctgtgactggggaatgtgtc
tgccatgctggctactggggacccagctgcaacacgtcatgcccacctggcttccatggt
agcaactgctcggatccctgtgaatgcccagagggaccctgcacccctatctctggggcc
tgccagctggggcctcgcagtcaggatgcagccctcatcgcaggcatccttgtacctctg
ctgctcctcctcctgggcatcatcttctgtgtctgctgctgccgggccgcccggttggac
cccaaggacaggccagcaagtgatggagctgctgtgtccaggatgaagctgcaggtctgg
ggggcactgagcagcctgggctcggtgctaccctgtggttccttcagcagccacaagctt
ccctgggtgacagtctcacaccacgacccggagatccccttcaaccacagcttcatcgag
ccgccctctgcgggctgggcctcagacgactccttctcttctgatcccgagtctggagag
gacgagagcccggcctactgcgtgccaccccaagaagggatggtcactgtggcccacgga
gagtttccagaggccagcctggctggaggtcccatccctcctcccgaggacgcctccaca
ccgttccccatcccgcgcacttccagtctcgcacgggccaagcggccatcagtctccttt
gccgaaggcaccaagtttgcgccacagagtcgccgaagctcaggggagatctccagtcct
ctccgaaagcccaagaggctctcccggggggcccagctgggtcctgaaagccaggaggct
gaggagtccatgggctcagagaaagcagaaatggatgagacccttcctggtgctgccagc
cccagggattcagccactggccgccgccggctcccccttggtggccggacagtggctgag
cgtgtagaagccattgagggcagtgtcctggagggctcaggctctgtgaccacgatctac
atgctggcagggacaccccagttatctgagggccctgtccggtctgttctccgccgtttt
ggtagcttccagaaaggccaggcagagcccaaggtcaagagtgccatccctaagcctcca
cgccgggcccttagtcgaaataagggcagccctgggctggcctctggctctgccagtcag
agccccagcttagccccgaatgatgagctcactaggcccttggagtctgcaggaactggg
ccagaggaagtggccagggggctaggggatggcaccaagagctcagggagggcccaggag
ctggcccctgagggtggcccccaagaacaggacccccagaagctggctgatggggaaggg
caagaggagccccagtatgagaatgttgcacccatctctgggccaccagcaccctga
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