Leptonychotes weddellii (Weddell seal): 102744384
Help
Entry
102744384 CDS
T08708
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102744384 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lww03019
]
102744384 (PATL1)
Messenger RNA biogenesis [BR:
lww03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102744384 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
102744384 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
102744384
NCBI-ProteinID:
XP_006748674
UniProt:
A0A2U3YY64
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGSL
NSSIWDGSEVLRRIRGPLIAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSPI
IGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERVSPNQLCSVP
NSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLPPGRMSPSQFARVPGFVGSPLAAMNPKLL
QGRVGQVLPPAPGFRAFFSAAPPAAPPPPPQHSPGPGPHLQNLRSQAPMFRPDTTHLHPQ
HRRLLHQRQQQNRNQHRSLNGAGDRGSHRSSQDHLRKDPYANLMLQREKDWVSKIQMMQL
QSTDPYLDDFYYQNYFEKLEKLSAAEEVQGEGPKKERTKLITPQVAKLEHAYKPVQFEGS
LGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYER
RYLLSLEEERPALADERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARIL
PFLSTEQAADILMTTARNLPFLIKKDAQDEVIPHVGLLSFGSS
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttagaggattgtcctctggatgaagatgaagatgcatttcag
ggcttgggagaagaagatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gccgttgatgatgattggcaggaagcacatgagcgcctggctgaattggaagagaagctg
ccagcagttaatgaacaaacaggcaatggagaaagggatgagatggacttgttgggtgac
catgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgagctagaagat
ccagctatcatgagggcagtgcagaccaggccagttctgcaaccccaaccaggaagtctc
aattccagcatctgggatggatctgaagttctgagacgaatccgagggccactgattgct
caggaaatgcctacggtgtctgtattagaatatgccctgcctcagaggcccccacagggt
ccagaagatgatcgagacctttctgagcgtgcattaccacggcggtcaacttcacctatc
attgggagtcctcctgttagagctgtccccataggcaccccacctaagcagatggctgta
cccagcttcaaccaacagatcctgtgtccgaagcctgtccatgtccgacccccgatgcca
ccgcgttatcctgctccctatggtgagagagtgtctccaaaccagctctgcagtgtcccg
aattcttccctactcggtcacccttttcctcctagtgttcctcctgttctcagccctctc
cagagagcacagcttcttggaggagcacagctaccgcctggacggatgtctcccagccag
tttgcacgggtccctggatttgttggtagtccgcttgctgccatgaatcccaagttgctg
caagggcgagtagggcaggtgcttcccccagcacccggcttccgtgccttctttagtgct
gcgccccctgccgctccgccgcctccgccccagcactcccctggcccagggccgcacctg
caaaacctaagatctcaggccccaatgtttagaccagacacaactcacctccatccacag
caccgtcggctcttgcatcagagacagcagcagaacagaaatcagcatcgcagtctcaat
ggcgccggagacagagggagtcaccggagcagtcaggaccatctccgcaaggacccctat
gccaacctcatgctgcagcgagagaaggattgggtctctaaaatccagatgatgcagctg
cagagcactgatccctacctggacgatttctattaccagaattactttgaaaaactggag
aaactgtcagctgctgaagaagtacaaggcgaaggcccgaaaaaggagcgcaccaagctc
attacccctcaggtggccaaactggagcacgcctataagccagtgcagttcgagggctct
ttgggaaagcttactgtctctagtgtgaataacccccgaaaaatgatcgatgccgtggtg
acatcgcggagtgaggatgatgagacaaaagaaaagcaggttcgggacaagagacgaaaa
acccttgtcatcattgaaaaaacgtatagtttactcctggatgtggaggattatgaaagg
cggtatctcctaagtctagaagaagagcgacctgccctggcggatgaaagaaagcacaaa
atttgtagcatgtatgacaacttaagggggaaattgcctggacaagagaggccaagtgat
gaccactttgtacagatcatgtgtatccgaaaagggaagagaatggttgcccgtattctt
cctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaatctccct
tttcttatcaagaaggatgcacaagatgaggtgatcccccatgtgggacttctttccttt
gggtcttcatag
DBGET
integrated database retrieval system
