Leptonychotes weddellii (Weddell seal): 102744644 Help Entry 102744644         CDS       T08708                                  Name (RefSeq) histone deacetylase 6   KO K11407   histone deacetylase 6 [EC:3.5.1.98] Organism lww  Leptonychotes weddellii (Weddell seal) Pathway lww04613   Neutrophil extracellular trap formation lww05014   Amyotrophic lateral sclerosis lww05034   Alcoholism lww05203   Viral carcinogenesis Brite KEGG Orthology (KO) [BR:lww00001]  09150 Organismal Systems   09151 Immune system    04613 Neutrophil extracellular trap formation     102744644  09160 Human Diseases   09161 Cancer: overview    05203 Viral carcinogenesis     102744644   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     102744644   09165 Substance dependence    05034 Alcoholism     102744644  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:lww01009]     102744644   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lww03019]     102744644    04131 Membrane trafficking [BR:lww04131]     102744644    03036 Chromosome and associated proteins [BR:lww03036]     102744644 Enzymes [BR:lww01000]  3. Hydrolases   3.5  Acting on carbon-nitrogen bonds, other than peptide bonds    3.5.1  In linear amides     3.5.1.98  histone deacetylase      102744644 Protein phosphatases and associated proteins [BR:lww01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      102744644 Messenger RNA biogenesis [BR:lww03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      102744644 Membrane trafficking [BR:lww04131]  Autophagy   Aggrephagy    Other aggrephagy associated proteins     102744644 Chromosome and associated proteins [BR:lww03036]  Eukaryotic type   Histone modification proteins    HDACs (histone deacetylases)     Class II HDACs      102744644 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Hist_deacetyl zf-UBP zf-UBP_var Motif Other DBs NCBI-GeneID:  102744644 NCBI-ProteinID:  XP_030889455 UniProt:  A0A7F8R7S1 LinkDB All DBs Position Unknown AA seq 1227 aa AA seqDB search MNEWLSKLGAVGWGVWGHSLSTAPYLFFLASASSVLYFSIHRYEQGRFWPHLKASNWSTI GFGRGQGYTMNVPWNQVGMRDADYIAAFLYLLLPVALEFQPQLVLVAAGFDALQGDPKGE MAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPTLESPGA PCPSAQASLSCALEALEPFWEVLVRSAETLEEDFLEEENVEKEAEGPWQPPALPIPTWPV LQARTGLVYDQRMMGHYNLWDKYANRVRGEVSPTMTSTGQDSTTTRQRRSRHNPHSPPHD SSVTSKRGVKKGALLHSSPSLAELKKKGRMKKLSQAAEQDLVVGLKELDVNLEAKTLSGT GLVFDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHS LEYIDLMETTQYMNEGELRILADTYDSVYLHPNSYTCACLASGSVLRLVDAVLGNEIRNG MAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQKKHAIQRVLIVDWDVHHGHGTQFTFDQ DPSLLFAFNSMSWTPLHVSASKKDTPVFMPQRVFRIMRRLEELGLAGRCLTLPARPATDA ELLTCHSAEYVGRLRATAKMKTRELHREGSSFDSIYICPDTFACAQLATGAACRLVEAVL AGEVLNGTAVVRPPGHHAERDAACGFCFFNSVAVAARHAQAVSGHALRILIVDWDVHHGN GTQHIFEQDSSVLYISLHRYDHGTFFPMGDEGASSQIGRATGTGFTVNVAWNGPRVGDAD YLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRI ILILEGGYNLTSISESMAACTRSLLGDPPPLLTLSRPPLSGALASITETIQVHRRYWRSL RAMKVEDKEGPSSSKSIPKKLTQPANRGSAVGMTAPDGNILDADAGKATSASSMEVATPD QAKSETAVVELSQDQTSEAPTGEATADQTPSEAATGGATLDQTIVESATVGATPGQTTSE EAVGGAAVIQTPPALCTDNQTPPASPAQGATAQIAPSKLTENLRTLDLNSEAQEAPESQM AEEEGLLGEAARGQDREDSVLIQSFGDHAHADQVMFYAVTPLPWCPHLVAVRPIPESGLD VTQPCQDCGTLQENWLCLSCYQVHCGRYVSAHMLQHHEVSGHPLVLSYVDLSTWCYNCEA YVHHQALLDVKNIAHQNKFGENMPHSH NT seq 3684 nt NT seq  +upstreamnt  +downstreamnt atgaatgagtggttgagtaaactgggagctgtgggttggggcgtctgggggcattcactc tcaaccgccccctacctcttttttcttgcctctgcctccagcgtcctctatttctccatc caccgctatgagcagggccggttctggccccacctgaaggcctctaactggtccaccata ggttttggccgaggccagggatataccatgaatgtgccttggaaccaggtggggatgcga gacgccgactacattgccgccttcctgtacctccttctgccagtcgcccttgagttccag ccccagctggtcctggtggccgctggatttgatgccctccaaggggaccccaagggtgag atggccgctactccggcagggttcgctcagctaacccacctgctcatgggtctggcagga ggcaaactgatcctgtctctggagggtggctacaacctccgctccctggccgagggcgtc agcgcctccctccacacccttctgggagacccttgccccacactggagtctcctggtgcc ccctgcccaagtgcccaggcgtcactctcctgcgctctggaagccctggagcccttctgg gaggtccttgtaagatcagctgagaccctggaggaggacttcctggaggaggagaacgtg gagaaggaagcagagggaccgtggcagcccccggcgctcccaatcccgacctggccggtg ctacaggctcgcacagggctggtctatgaccagcgaatgatgggtcactacaacttgtgg gacaagtatgcaaaccgcgtcaggggtgaagtctccccgaccatgacctccaccggccag gattccaccacaaccaggcagcgaaggagtaggcataacccccattcgcccccccacgac tccagcgtcacctcgaagcgaggtgttaagaagggtgccttactccactccagccctagt ctagcagagctaaagaagaaaggcagaatgaagaagctcagccaagcagcagagcaagac ctagtcgtgggcctgaaagagctggatgtgaacctcgaggccaagacactgtctggcact ggcttggtgttcgatgagcagctaaatgaattccactgcctctgggatgacagcttccct gaaggccctgagcggctccatgccatcaaggaacagctgatccaggagggccttctggac cgctgcgtgtccttccaggctcggtttgctgaaaaggaggagctgatgttggttcacagc ctagaatacattgatctgatggagacgacccagtacatgaatgaaggagagctccgcatc ctagcagacacctatgactcagtttacctgcatccgaactcatatacctgtgcctgcctg gcctcgggctctgtcctcaggctggtggatgcggtcctggggaacgagatccggaatggc atggccatcatcaggcctcctggacaccatgcccagcacagtcttatggatggatattgc atgttcaaccacgtggccgtggctgcccgctacgctcaaaagaagcatgccattcagagg gtgctcatcgtggactgggatgtgcaccatggtcacggtacacagtttacctttgaccag gaccccagcttgctttttgcatttaacagcatgtcgtggacacctctccatgttagtgcc tctaaaaaagacaccccggtctttatgcctcagcgagtcttccggatcatgcgccgtttg gaagaactgggccttgcggggcgctgcctcacgttgcccgcacgccccgccacggatgcc gaactgctcacctgccacagtgctgagtacgtgggtcgtctgcgggccacagcgaagatg aaaacccgggagctgcaccgcgagggctccagcttcgactccatctacatctgccccgac accttcgcctgcgcacagctggccactggcgccgcctgccgcctggtggaagccgtgctg gccggcgaggttttgaatggcactgctgtggtgcgtcccccaggacaccatgcagagcgg gatgccgcgtgtggtttttgctttttcaactctgtggctgtggctgctcgccatgcccaa gccgtcagtgggcatgcgctgcggatcctcatagtggactgggacgtccatcacggtaat ggaactcagcacatatttgagcaagactccagcgtgctgtacatttccctgcaccgatat gatcacggcaccttctttcccatgggggatgagggcgccagcagccagataggccgggcc acgggcaccggcttcaccgtcaacgtggcctggaacgggccccgcgtgggcgacgccgac tacctggctgcctggcatcgtctggtgctccctattgcctacgagtttaacccagaactg gtgctggtgtcggctggctttgatgctgcacggggggacccgctggggggctgccaggtg tcacccgagggctatgcacacctcacccacctgctgatgggccttgccaatggccgtatc atcctgatcctagagggtggctacaacctgacatccatctcggagtccatggctgcctgc acccgttccctccttggggacccaccaccactgctaaccctgtcgcggcccccgctgtca ggggccctggcctccatcaccgagaccatccaagtccatcgcagatactggcgcagcttg cgggccatgaaggtcgaagacaaggagggaccctccagttctaagtcgatccccaagaag ctgacccagccagccaaccgtgggtcagctgtggggatgaccgcaccagatgggaacatt ctggatgcggacgcagggaaggctacctcagcatcatccatggaagtggccactccagac caagctaagtcagagactgccgtggtggagctcagtcaggaccaaacctcggaggctccc actggggaagccacggcggaccagacaccctcagaggcagccacaggaggggccacgctg gaccagaccatcgtggagtctgccacagttggagccacgccgggccagaccacctcagag gaagccgtggggggagctgcggtgatccaaacccctccagccttatgtactgacaaccag actcctccagcctcacctgcgcaaggagccacggcccagatagcccccagtaagctgact gagaatctcaggaccttggacctaaacagcgaggctcaggaggcaccagaatctcagatg gcagaagaggaggggctgctaggagaggcagctagaggtcaggacagggaagattccgtg ctgattcagagctttggggaccatgcccacgccgaccaggtcatgttttatgccgtgaca ccgctgccctggtgtccccatttggtggcagtacgtcccatacctgaatcgggcctggac gtgacccaaccttgtcaggactgtggaacactccaggagaactggctgtgtctatcttgc tatcaggtccactgtggccgttacgtcagtgcccatatgctccaacaccacgaagtctca ggacacccgctggtcctcagctacgtcgacctgtctacctggtgttacaactgtgaggcc tatgtccaccaccaggctctcctggatgtgaagaacatcgctcaccagaacaagttcggg gagaacatgccccactcacactaa

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