Leptonychotes weddellii (Weddell seal): 102744856
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Entry
102744856 CDS
T08708
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X4
KO
K13191
RNA-binding protein 16
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lww03021
]
102744856 (SCAF8)
03041 Spliceosome [BR:
lww03041
]
102744856 (SCAF8)
Transcription machinery [BR:
lww03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102744856 (SCAF8)
Spliceosome [BR:
lww03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102744856 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102744856
NCBI-ProteinID:
XP_006740427
UniProt:
A0A2U3Y9M1
LinkDB
All DBs
Position
Unknown
AA seq
1354 aa
AA seq
DB search
MPQPLLPALPPPSSLCAAGSCGPSGGEVKQESDEGRRRRGWRVSRVSRRRPSSRPRRRPR
LALPTQRSGRRLFRRRARGLRTDNMEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKA
IKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTF
QNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSN
TPGTPVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQLQQQK
PQPSILQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQGVAFNKKLMDRFDFGEDSEHS
EEPKKEISASQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEG
TFGSEHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAV
RSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRARERE
KERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAY
VCMVHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKV
KVDDLEGFAEGGMIDQETVNTEWETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPP
PVAMLQIPVAPAVPAVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPP
VPPPVVPPPTIPPVVPTSLVQPPLSMTPETVKDVGFGGLVLPGGSVASSLATSTLPAGNV
FNPPTKQAEPEEKVPHLLDHQIPSGENTRSVIPNDIPSSPAILGGQPPNVTSNSGILGVQ
RPNVSSNSEIIGIRPSNVSSSSGIIGAQPPNILNNSGILGLQPPTVSSSSGLLGVLPPNI
PNNSGLIGVQPPNVPNAAGLLGTQPPAGPQNLPPLNLSSQRMPTMPMLDIRPGLIPQTPG
PRFPLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERPFLVPGRQSVDNVTN
PEKRIPLGNDNIQQEGDRDYRFPPIEARESISRPPPVDVRDVVGRPIDPREGPGRPPLDG
RDHFGRPPVDIRENLVRPGIDHLGRRDHFGFNPEKPWGHRDFDEREHRVLPVYGGPKGLH
EERGRFRSGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREINGNR
LGRDRIQNTWVPPPHPRVFDFFEGATSQRKGDNVPQVNGENTERHAQPPPLPVQNDPELY
EKLTSSSEINKEKSDTVADIESEPVVESTETEGT
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagccgctgctgccagcgcttcctcctccgtcttcgctgtgcgctgctggttcc
tgcggcccgagcggcggggaggtgaaacaggagtctgacgaaggaagaagaaggaggggg
tggagagtcagccgggtctcccgccggcgcccctcctcgcggccgcgccgccgcccccgt
ctcgctctccccacccagcgcagtggccgccgcctcttccgccgccgggctcggggcctc
cgcaccgacaacatggaggctgtgaaaaccttcaatagcgagttgtattccctgaatgac
tacaaaccacccatttctaaagcgaaaatgacccaaattactaaggcagccatcaaagct
attaagttctataaacatgtggtacagagtgttgagaaattcattcagaaatgtaaacca
gaatacaaggtacctggactttatgttattgactccattgtacgacaatctcgacatcag
tttggtcaagaaaaggatgtgtttgcacccagatttagtaataacatcattagcactttc
cagaatttatatcgttgccctggggatgacaagagtaaaatagtgagagtattaaattta
tggcagaagaataatgtgtttaagagtgagattattcagcctcttttggatatggcagca
gggattcctcccccagttgtcacacctgttttggccagtactactgctgctatgagcaac
accccaggaactcctgtgacacctgttactccagccaatgtggtccaaggtctaccggat
ccatgggtatctcagataacaaacacagatacacttgcagcagtagctcaaatcttacaa
agtcctcaaggccaacagcttcagcagttaatacagactttacaactacaacagcagaag
cctcagccttctatcctgcaggccctggacgctggtctcgttgtgcagttgcaagctctc
acagcacagctcacggctgcggctgccgcagccaacaccctgaaccccttggaacaggga
gtggctttcaacaagaagttgatggataggtttgattttggggaagattctgagcatagt
gaagaacccaaaaaggaaatttcagcttctcaactttctcatgtttcagaatctgtgaac
aattccatttttcatcagatagctgaacagctacagcagcaaaaccttgaacatctcaga
cagcaactcctagaacagcaacagcctcaaaaggcaacccctcaggatagtcaagagggc
acgtttggatcagagcattccgcctcaccatcacaggggagcagtcagcagcatttcctt
gaacctgaagtgaatttggatgattctatagatattcagcaacaggatatggatatagat
gaagggcaagatggagtggaagaggagatctttgaacaagaagcaaagaaagtggctgtt
cgctcaagatcaagaacacattcacgatctcgttcaagatcaccaagaaaacgaaggtct
cggtcgcgatctggttctcgaaagcgtaaacacagaaagcgatcacgctcacgctcaaga
gaaagaaagaggaaatcatcacgttcatactcaagtgaaaggagagcgagagaaagggag
aaagaacgacagaagaagggactacctccaattagatctaaaacattaagtgtatgtagt
actactttgtgggttggtcaggtggataagaaggcaacccagcaagatttaactaatctg
tttgaagagtttggacaaattgaatccattaatatgattcctcccaggggctgtgcttac
gtctgcatggttcatcgacaagatgcttttcgggctcttcagaaacttagttccggatca
tataaaattgggtccaaggtcattaagattgcttgggctttaaacaaaggtgtaaaaaca
gaatataaacaattctgggatgtggatcttggagttacgtatataccgtgggaaaaagtt
aaagtggatgacttggaaggttttgcagaaggaggcatgattgaccaggaaactgtaaat
actgagtgggaaactgtgaaaagctcagaacccgttaaagagacggtgcagacaactcag
agcccaactccagttgaaaaggagacagtggtcacaacccaggcagaggtttttcctcca
cctgttgctatgttacagattccagtagcgccagccgtgcctgcagttagtttagtccca
ccagcatttcctgtctcaatgccggttcctcctcctggattcagtccaatccctccacct
ccttttctgcgagcgagttttaacccttcacaaccacctcctggtttcatgccacctcca
gttccaccacctgttgtaccaccacccaccattccaccagtagtaccaacatctttagtg
cagccgccattatccatgactccagaaactgtgaaagatgttggatttggtggtcttgtt
ttacctggcggttctgttgccagcagtcttgctacttccactctgccagctggaaatgtt
tttaatcctccaactaaacaagcagagcctgaagaaaaagtacctcatcttctagaccac
cagattccttctggtgaaaacaccagatcagtgattccaaatgatattccaagtagccct
gcaattttaggaggacagccgccaaatgtgacaagcaattctggaattctgggagtccaa
agaccaaatgtgtcgagtaattctgaaattattggaatccggccatctaatgtttccagt
agttctgggattattggagcccagccaccaaatattctaaataactctggaattttggga
ctacagccaccaactgtgtcaagtagttctggacttttgggagtgctccccccaaatatc
cctaataattccggacttataggagtacagccaccaaatgttccaaacgccgctggactt
ttggggacacaaccaccagctgggcctcagaacttaccccctttaaatctctctagtcaa
aggatgcccacaatgccaatgttagacattcgtccaggactaataccacagacacctgga
ccaagattccctttaatacagcctggaattccaccccaaaggggaatccctcccccatcg
gtacttgattcagctcttcatccgccaccccgtggtccttttcctccaggagatattttt
agtcagccagaaagaccttttctagttcctggaagacaaagtgtagacaatgttaccaat
ccagaaaaaaggataccacttgggaatgataacattcaacaggaaggagatagagattac
cggtttcctcccattgaagccagggaaagcattagtagacctccccccgtggatgttagg
gatgtggttggacggcctatagatccaagagaaggtcctggaaggcctccattagatggt
agggatcattttggaagacctcctgtcgatattagagagaatcttgtgaggccaggcata
gatcatcttggtcgaagagaccactttggctttaatccagagaagccctgggggcataga
gattttgatgagagagaacatcgggttctacctgtctatggtggtccaaaaggcttacat
gaagaaagaggtagatttcggtctggaaactatcgatttgatcctagaagcggtccttgg
aacagaggatttggacaagaagttcacagagattttgatgaccgcagaagaccctgggag
aggcaaagggatagggatgacagagattttgatttctgcagagaaattaatggaaaccgt
cttggacgagatagaattcaaaacacctgggtcccccctcctcatcctcgggtttttgat
ttttttgaaggggccacttctcaacgaaaaggtgataacgtgcctcaggttaatggtgaa
aatactgagagacatgcccaaccaccacctttaccagtacagaatgatcctgaactttat
gaaaaactgacatcttcaagtgaaataaacaaggagaagagtgacacagttgctgatata
gaaagtgaaccagtggtagaaagcacagaaactgaggggacataa
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