KEGG   Leptonychotes weddellii (Weddell seal): 102745210
Entry
102745210         CDS       T08708                                 
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lww  Leptonychotes weddellii (Weddell seal)
Pathway
lww03082  ATP-dependent chromatin remodeling
lww04714  Thermogenesis
lww05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:lww00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102745210
 09150 Organismal Systems
  09159 Environmental adaptation
   04714 Thermogenesis
    102745210
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    102745210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lww03021]
    102745210
   03036 Chromosome and associated proteins [BR:lww03036]
    102745210
Transcription machinery [BR:lww03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     102745210
Chromosome and associated proteins [BR:lww03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    102745210
   PBAF complex
    102745210
   GBAF(ncBAF) complex
    102745210
SSDB
Motif
Pfam: SWIRM-assoc_3 SWIRM-assoc_1 SWIRM Myb_DNA-binding Myb_DNA-bind_6 CD99L2 Myb_DNA-bind_7
Other DBs
NCBI-GeneID: 102745210
NCBI-ProteinID: XP_030876315
UniProt: A0A7F8Q4Y0
LinkDB
Position
Unknown
AA seq 775 aa
MIDTYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPT
SHFHVLADTPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELTSASQQM
LTFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKD
DWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVA
FLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESS
GIAGTTSDEPERIEESGTDEARAEGQAAEEKKEPKEPREGVGAAEEETKEKTSEVPKKDE
ERGKQGDSEKESEKSDGDPIVDPDKEKEPKEGQEEVLKDVVESEGERKTKVERDIGEGNL
STAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRERE
ALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPVPPAGTA
GPPALHSLAMAPASVAPAPAGGGAPPGSLGPSEQIGQAGSAAGPQQQQPAGAPQPGAVPP
GVPPPGPHGPSPFPNQPTPPAMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPAPSIIPF
GSLADSISINLPPPPNLHGHQHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPL
GPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq 2328 nt   +upstreamnt  +downstreamnt
atgattgacacgtaccggctgaacccccaagagtatctcacctccaccgcctgccgcagg
aacctggccggtgatgtctgtgccatcatgagggtccatgccttcctagaacagtggggt
cttattaactaccaggtggatgctgagagtcgaccaaccccaatggggcctccgcccacc
tctcacttccatgtcttggcagacacaccatcagggctggtgcctctgcagcccaagacc
ccgcagggccgccaggttgatgctgataccaaggctgggcgaaagggcaaagagctggat
gacctggtgccagagacggctaagggcaagccagagctgacctctgcttcccagcaaatg
ctcaccttccctgacaaaggcaaagagaagccgacagacatgcagaactttgggctgcgc
acagacatgtacacaaagaagaacgtcccctccaagagtaaagctgcggccagtgccact
cgagagtggacggaacaggagaccctgctcctcctggaggcactggaaatgtacaaagat
gactggaacaaagtgtcagagcacgtgggaagccgcacgcaggatgagtgcatcttgcat
tttcttcgtcttcccattgaagacccgtacctggaggactcagaggcctccctgggcccc
ctggcctaccagcctatccccttcagtcagtcaggcaaccctgttatgagcactgttgcc
ttcctggcctctgtcgtcgatcctcgagtcgcctctgctgctgcgaagtcggccctagag
gagttctccaagatgaaggaggaagtgcccacagccttggtggaggcccacgtccggaaa
gtggaggaggcagccaaggtgacgggcaaggcagacccggccttcggtctggaaagcagc
ggtatcgcaggaaccacctctgatgagcctgagcggatcgaggagagcgggacggatgag
gcacgggcagaggggcaggccgcggaggagaagaaggagcccaaggaaccccgagaagga
gttggggctgccgaagaagaaacaaaggagaagaccagcgaggtccccaagaaggacgaa
gagagagggaaacaaggtgacagcgagaaggagtcagagaagagcgacggggaccccata
gttgacccggacaaggagaaggagccaaaggaagggcaggaggaagtgctgaaggacgtg
gtggagtcggagggggagaggaagacgaaggtggagcgggacattggtgagggcaatctg
tccaccgccgccgccgccgccctggccgccgccgctgtgaaggccaagcacctggccgct
gtggaggagaggaagatcaaatcactagtggccctgctggtggagacccagatgaaaaag
ttggagatcaaactccggcactttgaagagttggagaccatcatggaccgggagcgagag
gcactggagtatcagaggcagcagctcctggccgacagacaagccttccacatggagcag
ctgaagtacgcggagatgagggcccggcagcagcacttccagcagatgcaccagcagcag
cagcagcccccgccagccctgccgccaggctcccagcccgtcccaccggcgggcactgcc
gggccgcccgcgcttcacagcctggctatggctccggcctccgtcgcccctgcccccgct
ggcggcggggctccccccggaagcttgggcccctctgaacagattgggcaggcagggtca
gccgcggggccgcagcagcagcaaccagctggagccccccagcctggggcagtcccacca
ggggtacccccccctggaccccatggcccctcgccgttccccaaccaaccaactcctccc
gcaatgatgccaggggcagtgccaggcagcgggcacccaggcgtggcgggtaatgctcct
ttgggtttgccttttggcatgccgcctcctcctcctcccgctccatccatcatcccattt
ggtagtctagccgactccatcagtattaacctgccccctcctcctaacctgcatgggcat
cagcaccatctcccgtttgccccgggcactctccccccacctaacctgcctgtgtccatg
gcgaaccctctacatcctaacctgccggcgaccaccaccatgccatcttccttgcctctt
gggccggggctcggatccgccgcagcccagagccctgccattgtggcagctgttcagggc
aacctcctgcccagtgccagcccactgccagacccaggtacccccctgcctccagacccc
acggccccgagcccaggcacagtcacccctgtgccacctccacagtga

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