Leptonychotes weddellii (Weddell seal): 102745421
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Entry
102745421 CDS
T08708
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lww03019
]
102745421 (TNRC6B)
03036 Chromosome and associated proteins [BR:
lww03036
]
102745421 (TNRC6B)
Messenger RNA biogenesis [BR:
lww03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102745421 (TNRC6B)
Chromosome and associated proteins [BR:
lww03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102745421 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
102745421
NCBI-ProteinID:
XP_030880254
UniProt:
A0A7F8QG95
LinkDB
All DBs
Position
Unknown
AA seq
1740 aa
AA seq
DB search
MPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPSTAPGANSNNAQVTGTLLQG
DGGTAPESTLGGAAASNYANSTWGPGASSNNGASPNPIHIRDKVIVDGSDMEEWPCIASK
DTESSSENTTDNNSASNPGSEKSTLPGSTTSNKGKGSQCQSASSGNECNLGVWKSDPKTK
SVQSSNSTTESNNGLGNWRNVSGQDRIGPGSGFSNFNPNSNPSAWPALVQEGNSRKGALE
TDTSNSSAQVSTVGQASREQQSKMENAGVNFVVSGREQAQIHNTDGPKNGNTNSLNLSSP
NPMENKGMPFGMGLGNASRSTDAPSQSTGDRKTGSVGSWGAARGPSGTDTASGQSNSGNN
GNNGKDREDSWKGASVQKSSGSKNDSWDNNRSTGGSWNFGPQDSNDNKWGEGNKMTSGVS
QGEWKQPTGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNAQAPCWGRSSSSTGS
EVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSNTGWGQTQ
IKQDTVWDIEEVPRPEGKSDKGTEGWESAATQTKNSGGWGDAPSQSNQMKSGWGELSAST
EWKDPKNTGGWNDYKNNSSNWGGARPDEKTSSSWNENSSKDQGWGGGRQPNQGWTSGKNG
WGEEVDQAKNSSWESSASKPVSGWGEGGQNEIGTWGNSGNASLASKGGWEDCKRSPAWTE
TGRQPSSWNKQHQQQQPQQPPAPQPEASGSWGGPPPPPPGNGRPSNSNWSSGPQPVTPKD
EEPSGWEEPSPQSISRKMDIDDGTSAWGDPNSYNYKNVNLWDKNSQGGPAPREPNLPTPM
TSKSASVWSKSTPPAPDNGTSAWGEPNESSPGWGEMDDTGASTTGWGNAPSNAPNAMKPN
SKSMQDGWGESDGPVTGTRHPSWEEEDDGGVWNTAGSQGSASSHNSASWGQGGKKQMKCS
LKGGNNDSWMNPLAKQFSNMGLLSQTEDNPGSKMDLSVGSLPDKKFDVDKRAMNLGDFND
IMRKDRSGFRPPNSKDMGTTDSGPYFEKLTLPFSNQDGCLGDEAPCSPFSPSPSYKLSPS
GSTLPNVSLGAIGTGLNPQNFAARQGGNHGLFGNSTAQSRSMHTPVQPLNSSPNLRAQVP
PQFISPQVSASMLKQFPNSGLNPGLFNVGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQ
QQQQLLQNQRKLSQAVRQQQEQQLARMVSALQQQQQQRQPGMKHSPSHPVGPKPHLDNMV
PSALNVGLPDLQTKGPIPGYGSGFSSGGMDYGMVGGKEAGTESRFKQWTSMMEGLPSVAT
QEANMHKNGAIVAPGKTRGGSPYNQFDIIPSDTLGGHTGPAGDSWLPAKSPPTNKIGSKS
SNASWPPEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNS
SLNTSLPSPGAWPYSASDNSFTNVHSTSAKFPDYKSTWSPDPIGHNPTHLSNKMWKNHIS
SRNTTALPRPPPGLTNPKPSPWSSTAPRSVRGWGTQDSRLASASTWSDGGSVRPSYWLVL
HNLTPQIDGSTLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQTALHMCVLGNTT
ILAEFATDDEVSRFLAQAQPPTPAATPSAPAAGWQSLETGQTQSDPVGPALNLFGGSTGL
GQWSSSGGGSGADLAGASLWGPPNYSSSLWGVPAVEDPHRMGSPAPLLPGDLLGGGSDSI
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgggaggtgccgccgcgattccgttgccagcaggaccacaaagtgttactaaaa
cgtgggcagccccctccgccgtcctgcatgctcctcgggggtggggcagggcctcctccc
tccacagcacctggagcaaactcaaacaacgcacaagtgacaggaacgctgctgcagggg
gacggtgggactgcaccagagtcaacccttggaggtgctgctgcttcaaattatgcaaat
tccacttggggcccgggagcctcctccaacaacggcgcctcccccaacccaattcacatc
cgggacaaggtgattgtagacgggtctgacatggaagagtggccttgtattgccagcaaa
gacactgagtcttcttccgaaaacaccaccgataacaacagtgcctcgaaccctggctct
gagaagagcactctgccaggaagcaccactagtaacaaaggaaaagggagccagtgccag
tctgcaagttctgggaacgaatgtaatcttggggtctggaaatctgaccctaagactaaa
tctgttcaatcttccaactctactacagagagcaacaatggactaggaaattggaggaat
gtgagtggtcaggatagaattggacctggctctggcttcagcaactttaacccaaatagc
aacccatctgcctggccagcgctggtccaagaaggaaattctaggaaaggggcattggaa
acggatactagtaattccagtgcacaggttagcacagtaggtcaggcatccagggaacag
cagtcaaagatggaaaatgcgggtgttaattttgttgtctctggcagagaacaggctcaa
attcataacactgatggaccaaaaaatggaaacactaactccttgaacttaagttcacca
aaccccatggagaataagggaatgccctttggaatgggcttggggaacgcctccaggagc
actgatgccccttcacaaagcactggagatcgaaagactgggagtgttggatcttggggt
gcagctagggggccttctggaactgacacagcctctggacaaagcaattctggaaacaat
gggaacaatggaaaggatagagaggactcctggaaaggagcttctgttcagaaatcatct
gggtcaaaaaatgactcttgggacaataacaggtctacgggtgggtcctggaattttggc
cctcaggactctaatgacaacaaatggggtgaagggaacaaaatgacatctggggtctct
cagggagaatggaaacagccgactgggtctgatgagttgaaaattggagaatggagtggt
ccaaaccaaccaaattctagcactggagcatgggacaatcaaaagggccaccccctccct
gaaaaccaaggcaatgcccaggctccctgttggggaagatcttccagctccacaggaagt
gaagttggaggtcaaagcactggaagcaaccacaaagcaggaagtagtgacagtcataat
tctggccgtcggtcataccggcccacacatcctgattgtcaggctgtcttacagactctt
ttgagccgaactgatttggaccccagggtgctctcaaacactggctggggccaaactcaa
attaagcaggacacagtgtgggatattgaagaggtgccaaggcctgaggggaaatctgac
aaaggaactgaggggtgggagagcgctgccacacagaccaagaactcagggggctgggga
gacgcacccagccaaagcaatcaaatgaagtctggatggggggagctctcagcctctaca
gagtggaaagaccccaagaacacaggaggctggaatgactacaagaacaactcttccaac
tggggaggcgcacgaccagatgaaaagacttcttcctcttggaatgagaactccagcaag
gatcaggggtggggagggggacgccagcccaatcaaggatggacttctgggaagaatggt
tggggagaggaagttgatcaagcgaaaaacagcagttgggaaagttctgcaagtaaacct
gtgtctgggtggggtgaaggagggcagaatgaaattggaacttgggggaacagtgggaat
gcaagcctagcttccaaaggcggctgggaagattgcaaaaggtctccagcgtggactgag
accggcagacagcccagttcctggaataaacagcaccaacagcagcagccacaacagcca
ccggcaccacaaccagaggcttctggttcctggggaggcccacccccaccacctccaggc
aacggacgaccttccaattccaactggagcagcgggccacagccagtaacccctaaggat
gaggaacccagcggttgggaagagccatccccacagtcaattagtcggaaaatggacatc
gatgatggcacttcggcgtggggagaccccaacagttacaactacaagaatgtgaatctg
tgggataagaattcccaagggggcccagcacctcgagaaccaaacctgcctacccccatg
accagtaaatcagcatcagtctggagcaaaagcacaccacctgctccagataatggtact
tcagcttggggtgagccaaacgaaagcagtcctgggtggggtgaaatggatgacacagga
gcatcgaccacaggctgggggaacgcaccctccaatgctccaaatgccatgaaacctaat
tccaaatctatgcaagatggctggggggagagtgatggtccagtgacgggaactcgccat
cccagctgggaagaggaggatgatggaggagtctggaacaccgccggctctcagggaagt
gcttcctcccacaactcagcaagctggggacaaggaggaaagaagcaaatgaagtgctca
ctgaaaggaggaaacaatgattcatggatgaatcctcttgccaaacagttttcaaatatg
ggattgctgagtcaaactgaagataatccaggcagcaaaatggatttgtctgtagggagc
cttccagataaaaaatttgacgtggacaagcgagcgatgaatctcggggattttaatgat
atcatgaggaaggatcgatctgggttccgtccacctaattccaaagacatgggaaccaca
gatagtgggccttatttcgagaagctgactttgcctttctccaatcaagatgggtgcctt
ggggatgaggctccctgctctcccttctccccttctcccagctacaagctgtctccctct
ggttccacactacccaacgtcagccttggagcaatcggcacagggctcaacccccaaaac
ttcgctgctagacaaggtggcaatcatggtttgtttggaaatagcacagcacaatcgaga
agtatgcacacgccagtgcagccgctgaattcttctcctaatctccgggcgcaagtgcct
ccccagtttatttccccccaggtttctgcctcaatgctcaagcagtttcccaacagtggc
ctgaatccaggtcttttcaatgtggggccccagttatctcctcaacaaattgccatgctg
agccagcttccacaaattccccagtttcagttggcgtgtcagcttctcctgcagcagcag
cagcagcagcagttgctgcagaaccagaggaagctctcacaggccgtgcgccagcagcaa
gagcagcagctggctcggatggtgagcgccctgcagcagcagcagcagcaaaggcagcct
ggcatgaagcactcgccctcccatcccgttgggcccaagccacatctggacaacatggta
cccagcgctctgaatgtggggctcccagaccttcaaaccaaagggccaatacctggatat
ggttctggcttcagctctggtggcatggactatggcatggttggtgggaaggaggctgga
acagagtctcgctttaaacagtggacctccatgatggagggactgccctctgtagccaca
caggaggccaatatgcacaaaaatggcgctatcgtggcccctggtaagactcgaggaggg
tcaccatacaaccagtttgatatcatcccgagtgacacactgggtggccatacgggtcct
gctggtgatagctggttacctgccaaatctccaccaacaaataaaatcggaagtaaatcc
agcaatgccagttggcctccagaattccaaccaggagtgccatggaaaggtatccaaaac
attgaccctgagtctgacccctatgtcaccccaggaagtgtgctggggggtacagccaca
tctcccattgtagatactgaccaccaacttctgcgggataacaccacagggtctaattct
tccctcaacacctcgctgccttcacctggtgcctggccctacagtgcctctgacaactcc
tttaccaacgttcatagcacttcagcaaagttccctgattacaaatcaacatggtcccca
gatcccataggacacaaccccactcatctctccaacaagatgtggaaaaaccatatttcc
tcgaggaacactacagcgctgccccgcccacctcccggtctgaccaaccccaaaccatct
ccctggagcagcacagcaccccgatcagtcagggggtgggggacccaggactcacggctt
gcctcggcctctacctggagtgatggtggttcagttcgtcccagttactggctggttctt
cacaatctcactccacagattgatgggtcaacgttgagaaccatctgcatgcagcatggc
ccactgctgacattccatctgaacctaacccagggcaccgccctgatccgatacagcacc
aaacaggaggcggccaaggcccaaaccgcactgcacatgtgtgtgttgggaaacactacc
atcctggctgagtttgccaccgacgatgaagttagccgctttctggcacaggctcagccg
cctacacctgcagcaaccccaagtgcacccgccgcaggttggcagtcgctggagaccggc
cagacccagtcggaccccgtcggacctgctctgaatcttttcggtgggtccacagggctc
gggcagtggagcagctcgggcggcggcagcggggccgatcttgctggcgcttcattgtgg
gggcccccaaactattcttctagcttgtggggagtcccagctgtggaagacccccatagg
atgggcagccctgctcccttactacctggtgaccttctgggaggagggtcggattcaatc
tga
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