Leptonychotes weddellii (Weddell seal): 102745844
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Entry
102745844 CDS
T08708
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03013
Nucleocytoplasmic transport
lww03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102745844
03015 mRNA surveillance pathway
102745844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lww03019
]
102745844
Messenger RNA biogenesis [BR:
lww03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102745844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
102745844
NCBI-ProteinID:
XP_030876957
UniProt:
A0A7F8Q6T8
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Position
Unknown
AA seq
613 aa
AA seq
DB search
MRGQVSDPGNFFQGEEGEYSEEENSKVELKSEANDAANSSAKEEKGEEKPDTKGTVTGER
QSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKG
RQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDIRSAHNPDDIKPRRIRKPRFGSP
PQRDPNWIIERPNKSHRHQGPGGTLPPRTFINRNAAGTGRMSAPRNYSRSGGFKEGRAGF
RPVEAGGQHGGRCGETVKHESSYRSRRLEQTPVRDPCPEADAQVLGSPEKEEAASEIPAA
APDAAPPAPDRPVEKKSYSRARRTRIKAGDAVKVAEEVPPPPEGLNPAPQVPETTPPPPA
KTGNWEAPVDSTTSGLEQDVAQLNIAEQNWSPGQPSFLQPRMPNHIHMGAGPPPQFNRME
EMGVQGGRAKRYSSQRQRPVPEPPAPPVHISIMEGHYYDPLQFQGPIYTHGDSPAPLPPQ
GMIVQPEMHLPHPGLHPHQTPAPLPSPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGVMNF
GNPSYPYAPGALPPPPPPHLYPNTQAPSQVYGGVTYYNPAQQQVQPKPSPPRRTPQPVTI
KPPPPEVVSRGSS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtcaagtgtcagacccaggtaacttttttcagggtgaagaaggggaatacagt
gaagaggaaaactccaaagtagagctgaaatcagaagccaatgatgctgctaattcttca
gcaaaagaagagaagggagaagaaaagcctgacaccaaaggcactgtgactggagagagg
cagagtggggatggacaggagagcacagaacctgtggagaacaaagtgggtaaaaagggc
cctaagcatttggatgatgatgaagatcggaagaacccagcctacatcccccggaaaggg
ctcttctttgagcatgatcttcgagggcaaacacaggaggaggaagtcagacccaagggg
cgtcagcgaaagctatggaaggatgagggtcgctgggagcatgacaagttccgggaagat
gaacaagctccaaagtcccgacaggagctcattgctctttatggctatgacatccgctca
gctcacaatcctgatgacatcaaaccccgaagaatccggaaacccaggtttgggagccct
ccacagagagatccaaactggattattgagcggccaaacaagtcccatcgccaccagggt
cctgggggcaccctaccaccaaggacatttatcaacaggaatgctgcagggactggccga
atgtctgctcccaggaattactctcgatctgggggctttaaggaaggtcgtgctggtttt
aggcctgtggaggctggtgggcagcacggtggccgttgtggtgagactgttaaacatgaa
agcagttaccgatcacggcgcctagagcagactcccgtgagggacccatgtccagaagct
gatgctcaagtgctcggcagtcctgagaaggaggaggcggcctcagagataccagctgct
gctcccgatgctgcaccaccagcccctgacaggcctgttgagaagaaatcctactcccgg
gcaagaagaaccagaatcaaagctggagatgcagtcaaggttgcagaggaggtgccccct
ccacccgaagggctgaacccagcacctcaagtcccagaaacgactcctcctccacctgct
aagactggaaactgggaggctccagtggattctactacaagtggacttgagcaagacgtg
gcacaactaaatatagcagaacagaattggagtccagggcagccttcgttcctgcaacca
cgtatgcccaaccacatacacatgggagcaggacctccacctcagtttaaccggatggaa
gaaatgggtgtccagggtgggcgagccaaacgctattcatctcagcggcaaagacctgtg
ccagagccccctgctcctcctgtgcacatcagtatcatggagggacattactatgatcca
ctgcagttccagggaccaatctatacccatggtgacagccctgccccactgcctcctcag
ggcatgattgtgcagccagaaatgcaccttccccacccaggtttacatccccaccagaca
ccggcacctctgcccagtccgggcctctatcccccaccagtgtccatgtctccaggacag
ccaccacctcagcagttgcttgctcctacttacttttctgctccaggcgtcatgaacttt
ggtaatcccagttacccttatgctccaggggcactgcctcccccaccgccgcctcatctg
tatcctaatacgcaggccccatcacaggtatatggaggagtgacctactataaccccgcc
cagcagcaggtgcagccaaagccctccccaccccggaggactccccagccagtcaccatc
aagcccccaccacctgaggttgtaagcaggggttccagttaa
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