Leptonychotes weddellii (Weddell seal): 102746423
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Entry
102746423 CDS
T08708
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102746423 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lww00536
]
102746423 (COL25A1)
Glycosaminoglycan binding proteins [BR:
lww00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102746423 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
102746423
NCBI-ProteinID:
XP_030881249
UniProt:
A0A7F8QJ30
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MLVKKHAGKGGGREPGSEDQSPAGQRCAWTVPPCTALAALLSVVAVMSCLYLGVKTNDLQ
ARIAALESAKGDPSIHLLPDGLDQLKAMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC
PAGPPGKRGKRGRRGESGPPGQPGPHGPPGPKGDKGEQGDQGPRGLPGFPTVAALHSNQI
LTVKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQ
KGSVGVPGIPGVNGQKGEPGLPGTVGQNGIPGPKGEPGDQGEKGEAGENGPKGDTGEKGD
PGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGTKGER
GVAGPPGRGERGEPGAPGPKGEPGSPGIPGVDGEQGLKGSKGDVGDPGMPGEKGGIGLPG
LPGANGMKGEKGDSGLPGPQGPSIIGPPGPPGPHGPPGPMGPHGLPGPKGEPGLNGVKGL
KGEPGQKGDRGPLGLPGASGLDGKPGSRGTDGPMGPHGPAGPKGERGEKGAVGEPGPRGP
YGLPGFPGPRGEKGDVGEKGEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQ
K
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaagaagcatgcagggaaaggtgggggtcgggaaccaggctctgaggaccag
agccccgccgggcagcgttgtgcctggaccgtgcccccgtgcaccgccctggcggccctt
ctgtcagtggtggctgtgatgtcttgtctgtacctgggggtgaaaaccaacgacctccag
gcgaggatcgctgctctggaatccgcaaaaggggacccttccatccatttgcttcccgat
ggcctggatcagctcaaagcaatggtgcaagagaaagtggagcgacttctggctcagaaa
tcctacgaacatatggctaaaataagaattgcgagagaagcaccttcagagtgcaactgc
ccagcaggccctccagggaaacgaggtaagaggggccgaagaggagaatctggtcctccc
ggtcaacctggtcctcacggccctcctggtccaaaaggtgataagggagaacaaggtgat
cagggacctcggggtctaccaggcttccccacagttgctgctctgcacagtaatcagatc
ctcaccgtcaagggtgaccaaggacaggctgggcctccaggacccccagggccccctggc
ccaagagggcctccaggggacacagggaaagatggcccccgtggaatgccaggagtgccc
ggtgaaccagggaaaccaggagaacaaggcttgatgggtcctctggggcctccaggacaa
aagggttctgttggagtacctggaattccaggggtgaatggtcaaaagggtgagcccggg
ttgcctggaacagtaggacaaaacggaataccagggccaaagggagaacctggagatcaa
ggcgaaaagggagaagctggagagaatggccccaaaggtgacacaggcgaaaagggtgac
cctggatcatctgctgcaggaattaagggggaacctggagaatctggtcgtccagggcaa
aagggtgaaccagggcttcctgggcttcctggacttccggggataaagggagaaccaggt
ttcattggtcctcaaggagaaccaggtttaccagggttaccaggaacaaagggtgaacgt
ggggtggcagggcctcctggaagaggtgagcgaggggagcctggagcccctggaccaaag
ggagaaccaggatctccaggaatcccaggagttgatggagagcagggacttaaaggctca
aagggagacgtgggggacccaggtatgccaggtgaaaaaggaggaattggacttcctgga
ttaccgggtgccaatggaatgaaaggagaaaaaggagactccggattgccaggtcctcag
ggtccttctatcataggcccaccaggcccaccaggcccccatggcccaccaggccccatg
ggaccccatggacttcctggaccaaagggtgaaccagggttaaatggtgttaaaggattg
aagggtgaaccaggtcaaaagggtgacagaggaccccttggtcttccaggagcatctggc
ttagacggaaagccaggatcccggggtacagatggccctatgggaccccatggccccgca
ggtcccaaaggagaaagaggtgaaaaaggagctgtgggagaacccggacccagaggaccc
tacggtctgcctggcttccctggtccacgaggcgagaagggtgatgtaggagaaaaggga
gaaaagggattccgtggcgttaagggggaaaaaggggagccaggccagcctggcctggat
gggctggatgccccttgccaattggggccagatggattacccatgcccggctgttggcaa
aagtga
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