Leptonychotes weddellii (Weddell seal): 102746564
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Entry
102746564 CDS
T08708
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lww04131
]
102746564 (VPS50)
Membrane trafficking [BR:
lww04131
]
Protein recycling
Others
EARP complex
102746564 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
102746564
NCBI-ProteinID:
XP_030883597
UniProt:
A0A7F8QQW8
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELRDQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCSGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSASEG
SNMGTEETDFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISR
LMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSIL
QLHEFKFMEQSRSPSVSPSKQPASTSSKTVTLFEQYCSDGNPFEIQANRKDEETEDVLAS
NGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLNK
VNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLE
STGLGLSSSRLRTTLNRIQESLIDMEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSGD
TLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIY
WIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKASTQKYLWPQHSPVLLTQGS
CALFPRILSFLKNLSRYGLKKSLSTYRFLFPSHHFWFFIIVYLRYANVKKCSNEGRALMQ
LDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNV
CLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctcttatgacccgacagggtctgaaaagccctccggaaagcctt
agtgatcttggtgccattgagagtctccgggtccctggaaaggaggaattccgagaactt
cgagaccagcctagtgaccctcaagctgaacaagagctaattaatagtattgaacaagta
tatttttcaacggactcatttgatattgttaaatatgagctggagaaactccctcctgtt
ctcaatttgcaagaattagaggagtacagagacaaattgaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattacagacgggtcttcagttagctgctgttatctgcacaaatgggagg
agacacttgaatattgccaaggaaggttttactcaagctagtttaggccttcttgcaaat
caaaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtgcgcttaagtgaaatgctggaggaggaagactatccaggagctatt
cagttgtgcctggaatgtcagaaagccgccagcacttttaaacattacagttgcataagt
gaattgaattcaaagcttcaagatactttagaacaaattgaggaacagttggatgtagct
ctttctaaaatttgcaagaattttgacataaaccattataccaaggttcagcaggcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcacatgcacttcactcaagcc
attcataatactgtgtttcaagttgttcttggttatgtggaactatgttcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacacatgttacaccagacagc
tatattccatgccttgctgacctgtgcaaagcactgtgggaagttatgctcagctattac
aggactatggaatggcatgaaaaacatgacaatgaggatactacttctgcttctgaaggg
agtaatatgggtactgaagaaactgattttgatcgtggctacataaaaaagaaattagaa
cacggacttacacgaatatggcaggatgttcagctaaaagtaaaaacctacttgcttgga
acagatttgtctatatttaaatatgatgatttcatctttgttttggatataatcagcagg
ttaatgcaagttggagaagaattttgtggtagcaaatctgaagttttgcaagagtccatt
agaaaacagagtgtcaactattttaagaactaccatagaacacggcttgatgaactgaga
atgtttctagagaatgagacatgggagctttgtcctgtgaagtcaaatttcagcatcttg
caacttcatgaatttaaattcatggaacagtctcgttccccatcagtttcacctagtaag
cagccagcctcaacatcctcaaaaacagtgaccttgtttgagcagtactgtagtgatggg
aatccatttgaaatccaggccaaccgcaaagatgaagaaacagaagatgtcctggcttct
aatgggtatgaatctgatgaacaagaaaaaagtgcctatcaggagtatgacagtgacagt
gatgttcctgaggaactgaaacgagattatgtggatgagcaaacaggtgatgcgcctgtg
aaaagcgtttctagagaaactctaaaaagcaggaagaagtcagattatagtctaaataaa
gtgaatgcacccatcttaacaaatacaacattgaatgtaataagacttgttggtaaatat
atgcagatgatgaacattcttaagccgattgcctttgatgttatccatttcatgtctcag
ctatttgattactacttgtatgcaatatataccttttttggtcggaatgattcactggaa
tcaacaggactaggccttagtagtagtagactaagaacaactcttaacagaatacaagaa
agccttattgatatggaagtttcagctgatccaactgccaccctcacagcagcagaagag
agaaaggagaaggtaccaagtccacacctcagtcacctagtggttttgacatctggggat
acattatatgggctggcggaaagagtggtagccacagaatccttggtattcttggctgaa
cagtttgagttccttcagccccatctggatgccgtgatgcccgcagtcaaaaagcccttt
cttcagcagttttattctcagacagtctcaactgccagtgaactacgcaaaccaatttat
tggattgtagccggtaaagctattgattatgaacagatgcttctcctaatggccaatgtg
aagtgggacgtaaaagaaattatgtcacagcacaacatctatgtagatgcactgctaaag
gcaagtacacagaaatacctttggccccaacacagcccagtccttctgacacaaggctcc
tgtgctcttttccctagaatcctctcgtttctgaagaatctgtccagatatgggttaaag
aagagtttaagtacctacaggtttctttttccatcccatcatttctggttttttattatt
gtgtatcttagatatgccaacgtcaagaagtgtagtaatgagggtcgtgccttaatgcaa
ttggattttcaacagtttttaatgaaacttgaaaaactaacagatattagacccattcct
gataaagaatttgtggaaacctatattaaagcctactatctaaccgagaatgacatggaa
cgctggatcaaagagcacagggagtattcaacgaagcagctgaccaatctggtaaatgtt
tgcctgggatcccatatcaataagaaagcaagacaaaaacttctagctgctatagatgat
atagatagacccaaaagataa
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