Leptonychotes weddellii (Weddell seal): 102748428
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Entry
102748428 CDS
T08708
Symbol
ATG16L2
Name
(RefSeq) autophagy-related protein 16-2 isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102748428 (ATG16L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lww04131
]
102748428 (ATG16L2)
03029 Mitochondrial biogenesis [BR:
lww03029
]
102748428 (ATG16L2)
Membrane trafficking [BR:
lww04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
102748428 (ATG16L2)
Others
Specific organelles associated proteins
Auto phagosome
102748428 (ATG16L2)
Mitochondrial biogenesis [BR:
lww03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102748428 (ATG16L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_WDR19_1st
MIF4G_like_2
DUF5693
Motif
Other DBs
NCBI-GeneID:
102748428
NCBI-ProteinID:
XP_030880815
UniProt:
A0A7F8QHX6
LinkDB
All DBs
Position
Unknown
AA seq
620 aa
AA seq
DB search
MAGPSAAGLPVARWKRHIVRQLRQRDRTQKTLFVELVPAYNRLLEKAELLARISEKLQPE
PNDVTPATLQCPWEEESGPDSDQVPSPTTLRVKWQEKEEGLRRVCGEMAYQVVEKSAALG
TLEATLEERQSRLAALEARAAELQEARARQARQVDAQRAVNVAQRAAYEAMRAHARLREA
ALRRLEEEARDLLERLVQRKARAAAERNLRLERHEKAKQARMSLELKKAAKRTVSISESP
NPIGDGIREEAETLARPAEPLSLKSEAGEKWKRPFRSASATSLTLSRCVDVVKELLDFKK
RRGHSIGGAPEPRYQSIPVCVAAQPPTQVQDVLDAHLSEVNAVCFGASSSLLATGGADRL
IHLWNVVGDRLEANQTLEGAGGSITSVDFDPSGSQVLAATYNQAAQLWKVGEVQSKETLS
GHTDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGDHVIISG
HSDQKIRFWDSRVPCCTQIIPVQGRVTSLNLSQDQLHLLSCSRDDTLKVIDLRVSNIRQA
FRADGFRCGSDWTKAVFSPDRSYALAGSWDGALYIWDVDTGKLEGSLRGPHCTAVNAVAW
CSSGSHVVSADQARKVVLWH
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcccagcgccgccggcctgcccgtcgcccgctggaaacgccacatagtgcgg
cagcttcggcagcgggaccgcacgcaaaagacactcttcgtggagctggtgccggcctat
aaccgtctcctagagaaggctgagttgctggcccggatctcagagaagctgcagccagag
ccaaatgatgtcactcctgctaccctccagtgcccctgggaagaggaatcggggcctgac
tcagaccaagtcccatcaccaaccactctgagggtgaagtggcaagagaaggaggaaggg
ctccggcgggtctgtggtgagatggcctaccaggtggtggagaagagcgcggccttgggc
accctggaggcgacgctggaggagcggcaaagcaggctggcggctctggaggcccgcgcg
gcggagctgcaggaggcgcgggcgcggcaggcccggcaagtggacgcacagcgggcggtg
aacgtggcgcagcgggcggcctacgaggcgatgcgcgcgcacgccaggctccgggaggcg
gccctgcgccggctggaggaggaggcgcgtgacctgctggagcggctcgtgcagcgcaag
gcgcgcgccgccgccgagcgcaacctgcgcctcgagcgccacgagaaggccaagcaggcg
cggatgtccttggagctgaagaaggctgccaagcggacagtgagcatcagcgagagccca
aaccccataggcgacgggataagagaggaggctgagactctggcccggcctgctgagccc
ctgtccctgaagagtgaggctggtgagaagtggaagaggccgttcagatctgcctctgcc
acctccttgacactctcccgctgtgtggatgtggtgaaggagcttctggatttcaagaag
aggagaggccactccattggcggagctcctgagccgcgataccagagcatccctgtgtgt
gtggctgcccaacctcctacccaggttcaggatgtgctggatgcccacctttccgaggtc
aatgctgtttgttttggcgccagtagcagcctcctggccaccggaggggctgaccgcctc
atccacctctggaatgttgtgggagatcgtctggaggccaaccaaacccttgaaggagct
ggtggcagcatcacaagtgtggacttcgacccttcgggctcacaggtattagcagctact
tacaatcaggccgcccagctctggaaggtgggggaggtacagtccaaggagacactgtct
ggacacacagacaaggtgacggctgccaaattcaagctaacaaggcaccaggcggtgact
gggagccgggaccggacggtgaaggagtgggacctcggccgcgcctactgctccaggacc
atcaatgtcctttcctactgtaatgatgtggtgtgtggggaccatgtcatcatcagtggc
cacagtgaccagaagatccggttctgggacagcagggtcccctgctgcacccagatcatc
cctgtgcagggccgggtcacctccctgaacctcagccaagaccagctgcatctgctcagc
tgttcccgagatgacacactcaaggtcattgaccttcgtgtcagcaatatccgccaggca
ttcagggctgatggcttcaggtgtggttctgactggaccaaagccgtgttcagcccggac
agaagctatgccctggcaggttcctgggacggagccctttacatctgggatgtagacacc
ggcaagctggagggtagtctgcggggaccccactgcactgccgtcaacgccgtggcctgg
tgctcctcggggagccatgtggtgagcgcagaccaggccaggaaggttgtgctctggcac
tag
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integrated database retrieval system
