Leptonychotes weddellii (Weddell seal): 102748974
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Entry
102748974 CDS
T08708
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
lww
Leptonychotes weddellii (Weddell seal)
Pathway
lww03013
Nucleocytoplasmic transport
lww05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102748974 (NDC1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102748974 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lww03019
]
102748974 (NDC1)
Messenger RNA biogenesis [BR:
lww03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102748974 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
102748974
NCBI-ProteinID:
XP_030888646
UniProt:
A0A7F8R639
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MNLLIHLSYVLDSFSDLYSSYVIFYLLLLSVVEVIISIFNVEFYAVVPSIPCSRLALIGK
IIHPQQLMHSFVHAAMGMLVAWCAAVITKGQYSFLVVPCTGTESLNSPAAQTCLNEYHLF
FLLAGAFMGYSYSLLYFINNMNYLPFPIIQQYKFLRFRRSLLLLVKHSCVESLFLIRNFC
IVYYFLGHIPKAWISTAMDLQIDEQFHRPLDTVRGLLNLSLLYHVWLCGVFLLMTWYISW
ILFKIFATEAHLFPVQPPFSEESDECLPKVLNSSPPLIIKYLALQDLMLLSQYSPSRRQE
VFSLSQPGGHPHNWTAISRECLNLLNDMTQKLVLYQEAAATNGRMVSSYSVEPKKSNSPE
ETTFQTPKSSQLPRSSVPPLVKTSLFSSKLSTPDVGSPLRSPFGSSVVNRMAGIFDVNTC
YGSPQSSQLIRRGPRLWTSASDQQMTEFSNPSPSTSVSAEGKTARQPSMIYSWIQNKREQ
VKNFLSKRVLIMYFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTL
PAILNTLLTLQEAVDKYFKLPHASSKPPRISGSLVDTSYKTLRFAFRASLKTAIYRITTT
FGEHLNAVQASAEHQKRLQQFLEFKE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaacttactaattcatctctcttatgttttagattctttcagtgatctgtatagttcc
tatgtaatcttttacctcctactgctgtcagtggtagaagtaataataagtatttttaat
gtggagttctatgcagttgtgccttccattccctgctccagactggcactgatagggaag
atcattcaccctcagcagctcatgcactcatttgtccatgctgcaatggggatgctggtg
gcttggtgtgctgcggtgataaccaagggtcaatacagttttcttgtggttccctgcact
ggtactgagagtttaaatagccctgctgcacagacctgcttaaatgagtatcaccttttt
tttctactggctggagcgtttatgggctacagctatagtctcctgtattttattaacaac
atgaactatctgccatttcccatcatacagcaatacaagttcttacgcttcaggagatct
ctgctcttgttagttaagcatagttgtgtggaatcactgtttctgattagaaatttctgc
atcgtgtattattttcttggccatatccccaaagcttggattagcactgcgatggacctt
cagatagatgagcagtttcacaggcctcttgacactgtgcgtggcctcttgaatctctca
ttactctaccatgtctggctgtgtggtgtctttcttctgatgacttggtatatctcatgg
atactcttcaaaatctttgccacagaggctcatctgttccctgttcagccgccattttca
gaagagtcagatgaatgcctcccgaaggttttgaacagcagtcctcccctcatcataaag
tatttggccttgcaggacctgatgttgctttctcagtattctccttcacgaagacaggaa
gtttttagccttagccaaccaggtggacatccccacaattggacagccatttcaagggag
tgtttgaatcttttaaatgatatgactcagaaactggttctctaccaagaagccgctgct
acgaatgggagaatggtgtcctcatactccgtggaacccaagaaatcgaattctccagaa
gaaactacttttcagaccccgaaatctagccagctacctcggtcttcagtgccaccatta
gttaagacatcactgttttcctccaaattatctacgcctgatgttggaagtcccctcaga
agcccgtttggctctagtgtagtgaatcggatggctggaatttttgatgtaaatacctgc
tatgggtcccctcaaagttctcagctaataagaagagggccaagattgtggacttctgct
tctgatcagcaaatgactgaattttctaatccttctccatctacctctgttagtgctgag
ggtaagacagcgagacaacccagtatgatttattcatggattcagaataaacgtgaacag
gttaagaatttcttatcaaaacgggtgctgataatgtattttttcagtaagcacccagag
gcctctattcaggctgttttttcagatgcccaaatgcatatttgggcattagaaggtctg
tctcacttagtagcagcatcatttactgaagatagatttggagttgtccagactacacta
ccagctattcttaataccttgttgacgctgcaagaggcagtcgacaagtacttcaagctt
cctcatgcttccagtaaaccacctcggatttcaggaagccttgtggacacttcttataaa
acattaagatttgcatttagagcatcactaaaaactgccatctatcgaataactactaca
tttggtgaacatttgaatgctgtgcaagcatctgcagaacatcagaaaagacttcaacag
ttcttggagttcaaagaatag
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