KEGG   Leptonychotes weddellii (Weddell seal): 102748974
Entry
102748974         CDS       T08708                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
  KO
K14315  nucleoporin NDC1
Organism
lww  Leptonychotes weddellii (Weddell seal)
Pathway
lww03013  Nucleocytoplasmic transport
lww05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:lww00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102748974 (NDC1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102748974 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lww03019]
    102748974 (NDC1)
Messenger RNA biogenesis [BR:lww03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102748974 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 102748974
NCBI-ProteinID: XP_030888646
UniProt: A0A7F8R639
LinkDB
Position
Unknown
AA seq 626 aa
MNLLIHLSYVLDSFSDLYSSYVIFYLLLLSVVEVIISIFNVEFYAVVPSIPCSRLALIGK
IIHPQQLMHSFVHAAMGMLVAWCAAVITKGQYSFLVVPCTGTESLNSPAAQTCLNEYHLF
FLLAGAFMGYSYSLLYFINNMNYLPFPIIQQYKFLRFRRSLLLLVKHSCVESLFLIRNFC
IVYYFLGHIPKAWISTAMDLQIDEQFHRPLDTVRGLLNLSLLYHVWLCGVFLLMTWYISW
ILFKIFATEAHLFPVQPPFSEESDECLPKVLNSSPPLIIKYLALQDLMLLSQYSPSRRQE
VFSLSQPGGHPHNWTAISRECLNLLNDMTQKLVLYQEAAATNGRMVSSYSVEPKKSNSPE
ETTFQTPKSSQLPRSSVPPLVKTSLFSSKLSTPDVGSPLRSPFGSSVVNRMAGIFDVNTC
YGSPQSSQLIRRGPRLWTSASDQQMTEFSNPSPSTSVSAEGKTARQPSMIYSWIQNKREQ
VKNFLSKRVLIMYFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDRFGVVQTTL
PAILNTLLTLQEAVDKYFKLPHASSKPPRISGSLVDTSYKTLRFAFRASLKTAIYRITTT
FGEHLNAVQASAEHQKRLQQFLEFKE
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgaacttactaattcatctctcttatgttttagattctttcagtgatctgtatagttcc
tatgtaatcttttacctcctactgctgtcagtggtagaagtaataataagtatttttaat
gtggagttctatgcagttgtgccttccattccctgctccagactggcactgatagggaag
atcattcaccctcagcagctcatgcactcatttgtccatgctgcaatggggatgctggtg
gcttggtgtgctgcggtgataaccaagggtcaatacagttttcttgtggttccctgcact
ggtactgagagtttaaatagccctgctgcacagacctgcttaaatgagtatcaccttttt
tttctactggctggagcgtttatgggctacagctatagtctcctgtattttattaacaac
atgaactatctgccatttcccatcatacagcaatacaagttcttacgcttcaggagatct
ctgctcttgttagttaagcatagttgtgtggaatcactgtttctgattagaaatttctgc
atcgtgtattattttcttggccatatccccaaagcttggattagcactgcgatggacctt
cagatagatgagcagtttcacaggcctcttgacactgtgcgtggcctcttgaatctctca
ttactctaccatgtctggctgtgtggtgtctttcttctgatgacttggtatatctcatgg
atactcttcaaaatctttgccacagaggctcatctgttccctgttcagccgccattttca
gaagagtcagatgaatgcctcccgaaggttttgaacagcagtcctcccctcatcataaag
tatttggccttgcaggacctgatgttgctttctcagtattctccttcacgaagacaggaa
gtttttagccttagccaaccaggtggacatccccacaattggacagccatttcaagggag
tgtttgaatcttttaaatgatatgactcagaaactggttctctaccaagaagccgctgct
acgaatgggagaatggtgtcctcatactccgtggaacccaagaaatcgaattctccagaa
gaaactacttttcagaccccgaaatctagccagctacctcggtcttcagtgccaccatta
gttaagacatcactgttttcctccaaattatctacgcctgatgttggaagtcccctcaga
agcccgtttggctctagtgtagtgaatcggatggctggaatttttgatgtaaatacctgc
tatgggtcccctcaaagttctcagctaataagaagagggccaagattgtggacttctgct
tctgatcagcaaatgactgaattttctaatccttctccatctacctctgttagtgctgag
ggtaagacagcgagacaacccagtatgatttattcatggattcagaataaacgtgaacag
gttaagaatttcttatcaaaacgggtgctgataatgtattttttcagtaagcacccagag
gcctctattcaggctgttttttcagatgcccaaatgcatatttgggcattagaaggtctg
tctcacttagtagcagcatcatttactgaagatagatttggagttgtccagactacacta
ccagctattcttaataccttgttgacgctgcaagaggcagtcgacaagtacttcaagctt
cctcatgcttccagtaaaccacctcggatttcaggaagccttgtggacacttcttataaa
acattaagatttgcatttagagcatcactaaaaactgccatctatcgaataactactaca
tttggtgaacatttgaatgctgtgcaagcatctgcagaacatcagaaaagacttcaacag
ttcttggagttcaaagaatag

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