Leptonychotes weddellii (Weddell seal): 102749205
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Entry
102749205 CDS
T08708
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X2
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lww03021
]
102749205 (CHD1)
03036 Chromosome and associated proteins [BR:
lww03036
]
102749205 (CHD1)
Transcription machinery [BR:
lww03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
102749205 (CHD1)
Chromosome and associated proteins [BR:
lww03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
102749205 (CHD1)
SLIK complex
102749205 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
102749205
NCBI-ProteinID:
XP_006727855
UniProt:
A0A2U3X8Q8
LinkDB
All DBs
Position
Unknown
AA seq
1797 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSESGSESGS
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQQQASSNSGSE
EDSSSSEDSDDSSNEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETESDYE
PKNKVKSRKPQNRSKAKNGKKILGQKKRQIDSSEEEDDEEDYDNDKRSSRRQATVNVSYK
EDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGDP
NAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWL
KNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSW
EDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESLELRD
YQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLT
SWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFL
GGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPE
KFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQK
QYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHL
IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELR
KQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQ
KKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKE
ELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVAN
FSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFN
GSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGG
PLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPTFR
ISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLI
GIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKEAQ
RLSGAGGSKRRKARAKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKDEITSVKHPNKK
IKTERDSEERPEPDVFIKKESEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKREN
KVKEAIQKEKDIKEEKLSESKSDSKERSKKSSVSDAPVHITASGEPVPISEESEELDQKT
FSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQ
WRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSNLNAQVIRNPDVERLKEN
TNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYKQ
ESRYYSDREKHRKLDDHRSRDHRSNLEGSLKDRSHSDHRSHSDHRLHSDHRASSEYTHHK
SSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPFEHSIEHKSTPEHTWSSRKT
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttcaggctcaggatctggttcaagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgaatctggatctgaatcgggcagt
cagtcagagtctgaatcagacacttcccgagaaaacaaagtccaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagccctagtattctggccgttcagagatctgca
atgctcaagaagcagcagcagcagcagcagcagcaggcttcatctaatagtggatcggag
gaggattcctccagcagtgaagattctgatgactcatcgaatgaggtcaaaaggaaaaag
cataaagatgaagattggcaaatgtctgggtcaggatctccatctcaatctggttcagat
tcagaatctgaagaagaaagagataaaagcagttgtgatgaaacagaatctgattatgag
ccaaaaaacaaagttaaaagcagaaaacctcaaaatagatctaaggcaaaaaatgggaag
aaaattcttggacaaaaaaagagacagattgattcatctgaggaggaagatgatgaagaa
gattatgataatgataaaagaagttctcgtcgccaggcaactgtcaatgttagctataaa
gaagatgaagaaatgaaaacagattctgatgatctactggaagtctgtggggaggatgtt
cctcaacctgaggaagaggaatttgaaacaatagaacgttttatggattgtcggattggg
agaaaaggagctactggtgctactacaaccatctatgcagttgaagcagatggtgaccca
aatgcaggatttgaaaaaaacaaggaaccaggcgagatccaatatttaattaaatggaaa
ggatggtcccatattcacaatacttgggagacagaagaaacccttaagcagcagaatgtt
agaggaatgaaaaaattggataattataagaaaaaagatcaggaaacaaaaagatggttg
aaaaatgcttctccagaagatgtggaatattataattgccagcaagaactcacagatgat
ctacacaaacagtatcaaatagtggaacgaataattgctcattccaatcagaagtcagca
gctggttatcctgattattattgcaaatggcagggccttccatactcagagtgcagctgg
gaggatggagctctaatttccaaaaagtttcaagcatgcatagatgagtattttagcagg
aatcagtcaaaaaccactccttttaaagattgcaaagtattaaaacaaaggccaagattt
gtagccctaaagaagcagccatcctatattggaggacatgagagtttagaattaagagat
tatcaactgaatggtttaaattggcttgctcactcttggtgcaaaggaaatagttgcata
cttgctgatgaaatgggccttggaaaaacaatacagacgatctcatttctgaactattta
tttcatgaacatcaattatatggaccttttctgttagtagtaccactttccactcttact
tcctggcaaagggaaattcagacatgggcttctcaaatgaatgctgtggtttatttaggt
gacattaacagcagaaatatgataagaactcatgaatggatgcatccccagaccaaacgg
ttaaaatttaatatacttttaacaacttacgaaattttattgaaggataaggcattcctt
ggaggtctgaattgggcgtttataggtgtagatgaagcacatcgattaaagaatgatgac
tctctcctgtataaaactttaatagactttaagtccaatcaccgtctccttattactgga
actcctctacaaaactccctcaaagagctctggtctttgctacatttcattatgccagaa
aagttttcttcctgggaagattttgaagaagaacatggaaaaggcagagaatatggttat
gcaagcctccacaaggagcttgagccgtttctgttacgcagagttaaaaaagatgtggaa
aaatctcttcctgccaaggttgaacagattttaagaatggaaatgagtgctttacagaaa
cagtattacaaatggatattaactaggaattacaaagccctcagcaaaggttccaagggc
agtacctcaggctttttgaacattatgatggagctaaagaaatgttgtaaccattgctac
ctcattaaaccaccagataataatgaattctataataaacaggaggccttacaacactta
atccgtagtagcggaaaattgattcttcttgacaaactgttaattcgcctaagagaacga
ggcaatagagttcttattttttctcaaatggtgcggatgttagatatacttgcagaatat
ttgaaataccgtcaattcccctttcaaagattagatggatcaataaaaggggaactgaga
aaacaagctctagatcattttaatgctgaaggatcagaggatttctgctttttgctttcc
acgagagctggaggcctgggaattaatttagcctctgctgacactgttgttatatttgat
tctgattggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattgggcag
aagaaacaggtgaatatttatcgtctagttacaaagggatcagttgaagaggatatactt
gaaagggcgaaaaagaagatggttttggatcaccttgtgattcagagaatggacacaact
gggaagacagtactacatacaggttctgccccctcaagttctactcctttcaataaagaa
gaattatcagccattttaaagtttggcgctgaggagctttttaaggaacctgaaggagaa
gaacaagagccccaggaaatggatatagatgagatcttgaagagggctgaaactcatgaa
aacgaaccaggccctttaactgtaggagatgaattgctttcccagttcaaggttgccaac
ttttcaaatatggatgaggatgacattgagttggaaccagaaagaaattcaaagaattgg
gaagaaataattccagaagatcaaagaagacgattagaagaggaagaaagacaaaaggaa
cttgaagaaatttatatgctcccaagaatgagaaactgtgcaaaacagattagttttaat
ggaagtgaagggaggcgcagtagaagtaggagatactctggatctgatagtgactcgatc
tcagaaaggaaaaggccaaagaaacgtggaagaccacggactattcctcgagagaatatc
aaaggatttagtgatgcagaaattcggcggtttatcaagagttacaagaaatttggtggc
cctctggaaagattagatgcaattgctcgggatgctgaattagttgataagtcagagaca
gacctcagacgactaggagaattggtgcataatggttgcattaaagctttaaaggataat
tcttcaggaacagaacgaacaggtggtagacttggaaaagtgaagggtccaacattccga
atatcaggtgtacaggtgaatgccaagcttgtcatctcccatgaagaagaattaatacca
ttgcacaaatccattccgtcagatcccgaagaaagaaaacagtatactatcccatgccac
acaaaggcagctcattttgatatagactggggcaaagaagatgattccaatttgttaatt
ggtatctatgaatacggatatggaagctgggaaatgattaaaatggatcctgacctcagt
ttaacacacaagattcttcctgatgatcctgataaaaaaccacaagcaaagcagttgcag
acacgtgcagactacctcatcaaattacttagtagagatcttgcaaaaaaagaagctcag
agactttctggtgcaggaggatcaaagaggagaaaagcaagagctaagaagaataaagca
atgaagtctataaaagtgaaagaagaaataaagagtgattcttcgcccctgccttcagag
aaatccgatgaagatgatgataaggatgagatcacttctgtgaaacatccaaataaaaaa
attaaaacagaaagagacagtgaagaaagacctgagccagatgtttttataaagaaggaa
tcagaagaaaagagggaagcaaaagaaaaagagaataaaagagaacttaagagggagata
aaagaaaaagaggataagaaagatataaaggaaaaagattttaaagagaaaagagaaaac
aaagtaaaagaagctatacagaaagaaaaagacataaaggaagaaaagttgagcgaatcc
aagtctgatagcaaggaaagatccaagaaatcttcagtgtcagatgctccagttcatatc
accgcaagtggtgaaccagttcccatatctgaagaatctgaagagctagatcagaagaca
ttcagcatttgtaaagaaaggatgaggcctgtcaaagcagctttgaaacaacttgatagg
cctgaaaaaggcctttcagaaagagaacaactggagcatactagacagtgtttaataaaa
attggagaccatatcacagaatgtctgaaagagtatacaaatcctgaacaaatcaagcag
tggagaaaaaacctgtggatttttgtatctaagtttacggagtttgatgcaagaaaatta
cataaattatataaacatgctattaaaaaacggcaggaatctcagcaaaataatgaccag
aacagcaacttgaatgctcaagtgattagaaatccagatgtggaaagattaaaagagaat
acaaatcatgatgatagcagcagggacagttattcatctgacagacacttatctcagtat
catgatcatcataaagaccgacatcagggagattcttacaaaaagagtgactctaggaaa
agaccctattcttcttttagcaatggtaaagatcatcgtgactgggatcattacaagcag
gaaagcaggtattacagtgatagagagaaacacagaaaactggatgatcacaggagtaga
gatcacaggtcaaatttggaaggaagtttaaaggatagatctcattctgatcatcgttct
cattcagaccatcggttacattcagaccatcgggcaagttctgaatatacacaccataaa
tcttccagggattataggtatcactcagattggcaaatggaccacagagcttccagtagt
ggccccagatcaccactagatcagaggtctccttatggctccagatctccatttgaacac
tcaattgaacacaaaagtacacctgagcatacctggagtagtcggaaaacataa
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integrated database retrieval system
