KEGG   Leptonychotes weddellii (Weddell seal): 102749351
Entry
102749351         CDS       T08708                                 
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
lww  Leptonychotes weddellii (Weddell seal)
Pathway
lww03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lww00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102749351 (PRPF38A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lww03041]
    102749351 (PRPF38A)
Spliceosome [BR:lww03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    102749351 (PRPF38A)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    102749351 (PRPF38A)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 102749351
NCBI-ProteinID: XP_006751360
UniProt: A0A2U3Z5S9
LinkDB
Position
Unknown
AA seq 209 aa
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKVRHLGA
NT seq 630 nt   +upstreamnt  +downstreamnt
atggcgaaccgtacagtgaaggatgcgcacagtatccacggcaccaatcctcagtatctg
gtggagaagataattcggacgcgaatctatgagtccaagtactggaaagaggagtgtttt
ggactgacggctgaacttgtagtcgataaagccatggagttgaggtttgtgggtggtgtc
tatggtggcaacataaagccaactccctttctgtgtttgaccttgaagatgcttcaaatt
caacctgagaaggatatcattgtagagtttatcaaaaatgaagatttcaaatatgtccgt
atgttgggagcactttacatgaggctgacaggcactgcaattgattgctacaagtactta
gagcctctctacaacgactatcgaaaaatcaagagccagaacagaaatggggagtttgaa
ctgatgcatgtggatgagtttattgatgaactgctgcacagtgagagagtctgtgatatc
attctaccccggctacagaaacgttatgtgctagaggaagctgagcagctggagcctcgg
gtcagtgctctagaagaggacatggatgatgtggagtccagtgaagaggaggaagaggag
gatgagaaggtcaggcacctgggagcttaa

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