Leptonychotes weddellii (Weddell seal): 102749790 Help Entry 102749790         CDS       T08708                                  Symbol LIG1 Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism lww  Leptonychotes weddellii (Weddell seal) Pathway lww03030   DNA replication lww03410   Base excision repair lww03420   Nucleotide excision repair lww03430   Mismatch repair Brite KEGG Orthology (KO) [BR:lww00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     102749790 (LIG1)    03410 Base excision repair     102749790 (LIG1)    03420 Nucleotide excision repair     102749790 (LIG1)    03430 Mismatch repair     102749790 (LIG1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:lww03032]     102749790 (LIG1)    03400 DNA repair and recombination proteins [BR:lww03400]     102749790 (LIG1) Enzymes [BR:lww01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      102749790 (LIG1)     6.5.1.6  DNA ligase (ATP or NAD+)      102749790 (LIG1)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      102749790 (LIG1) DNA replication proteins [BR:lww03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     102749790 (LIG1)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      102749790 (LIG1) DNA repair and recombination proteins [BR:lww03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      102749790 (LIG1)    NER (nucleotide excision repair)     Other NER factors      102749790 (LIG1)    MMR (mismatch excision repair)     Other MMR factors      102749790 (LIG1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DDR RNA_ligase PucR mRNA_cap_enzyme Motif Other DBs NCBI-GeneID:  102749790 NCBI-ProteinID:  XP_030897220 UniProt:  A0A7F8RV98 LinkDB All DBs Position Unknown AA seq 894 aa AA seqDB search MQRSIMSFFYPKKEGKVKKPEKETSNSVRETEPPPKVALKERNGEVPESDSPVKRPGRKV ARVLGSEGEEEDEAVTPSKGQKPAPSSPQVSPPSPVTFPESSPSLSSSPVDISPAGIPKR RTARKQLPKRTIQDVLEEQGKDEDREAKRKKEEEAETPPEGLTEPEVTQKKEAEGEGQPV TPPEHPETSSAEPPPDTALEPEVAGKREAREEDPAKPPAKVPKTVSSFFAPRKLATKKEG KEEGPGTARQEEAKGPLDPPSYNPAKNNYHPIDDACWKPGQKVPYLAVARTFEKIEEVSA RLRMVETLSNLLRSVVALSPPDLLPILYLSLNRLGPPQQGLELGVGDGVLLKAVAQATGR QLESVKAEAAEKGDVGLVAENSRSTQRLMLPPPALTATGVFTKFRDIARLAGSASTAKKM DVIKGLFVACRHSEARYIARALSGRLRLGLAEQSVLAALAQAVSLTPPGQESPPAVVDAG KGRTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGVPLKPML AHPTRGVGEVLKRFEEAAFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISR IPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDAAEIQVQVCLYAFDLIY LNGQSLVREPLSRRRQLLRENFMQMEGEFVFATSLDTKDTEQIAEFLEQSVKDSCEGLMV KTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLAAYD EESEEFQAICKLGTGFSDEELEEHYQRLQALVLPTPRSYVRADGAVAPDHWLDPSAVWEV KCADLSLSPIYPAARGLVSSRGTTGCRQQEGPRADLPDGRWGAGGHGAHACAPG NT seq 2685 nt NT seq  +upstreamnt  +downstreamnt atgcagcggagtatcatgtcatttttctaccccaagaaggagggcaaagtgaaaaagcca gagaaggagacctccaacagcgtcagagagacagagccacctccaaaggtggcgctgaag gagcgcaatggagaggtgcctgagagcgattctccagtgaagaggccagggcggaaggtg gcccgggtcctgggcagtgaaggggaggaggaggacgaagccgtcacgccctccaaaggc cagaagcctgcccccagctctccacaagtctcccctcccagccccgtcacatttcccgag agcagtccctccctctccagctctcctgtggacatctccccagcagggatcccgaagcgg cgcacagctcggaagcagcttcctaagcggacaatacaggatgtcctggaggagcagggc aaggatgaggacagagaggccaagaggaagaaggaggaagaagctgagaccccaccggaa ggcctcacagagcctgaagtgacccaaaagaaagaagcagaaggggagggccagcccgtg acgccccctgagcacccagagacctcctcagcggagcccccgccagacaccgccttggag cctgaggtggcggggaagcgggaggctcgagaggaggacccggccaagccgcccgccaaa gtgcccaagacggtcagcagcttcttcgccccccggaaactggcaaccaagaaagaaggg aaagaagagggacctggcacagcaagacaggaggaggccaaggggcccctggaccccccc agctacaatcctgccaaaaacaactaccatcccattgacgacgcgtgctggaagccaggc cagaaggtcccttacctggctgtggcccggacatttgagaagattgaggaagtttctgct cggctccggatggtggagacgctgagcaacttgctgcgttccgtggtggccctgtcacct ccagacctcctccccatcctctacctcagcctcaaccgcctcgggccaccccagcagggc ttggagcttggcgtcggtgacggtgtcctcctcaaggcggtggcccaggccacggggcgg cagctggagtctgtcaaggccgaggcagccgagaagggcgacgtggggctggtggccgag aacagccgcagcacccagagactcatgctgcccccgcccgctctcactgccaccggggtc ttcaccaagttccgagacatcgcccggctggccggtagtgcttccacagccaagaagatg gacgtcatcaaaggcctctttgtcgcctgccgccactcggaagcccgatacatcgccaga gccctgagcggccggctgcgcctcgggctggcggagcagtcggtgctggccgcgcttgcc caggctgtgagcctcacgcccccaggccaagaatcgcccccggccgtcgtggatgctggg aagggcaggacagcggaggcccgaaagacgtggctagaggagcaaggcatgatcctgaag cagacgttctgcgaggtgcccgacctggaccggatcatccctgtgctgctggagcacggc ctggagcgcctcccggagcactgcaagctgagcccaggggttcccctgaaaccaatgctg gcgcaccccacccgtggtgtcggcgaggtcctgaaacgcttcgaggaggcagctttcacc tgcgagtacaaatacgatgggcagagggcgcagatccacgtcctggaaggcggggaggtg aagatcttcagcaggaatcaggaagacaataccggaaagtacccggacatcatcagccgc atccccaagattaaactcccatcagtcacatccttcatcctggacacagaagccgtggct tgggaccgggaaaagaaacagatccagccattccaagtgcttaccacccgcaaacgcaag gaggtggacgcggcagagatccaggtgcaggtgtgtctgtacgccttcgacctcatctac ctcaatggacagtccctggtgcgtgagccgctttcccgacgccggcagcttctccgggag aacttcatgcagatggagggcgagtttgtcttcgccacctccctggacaccaaggacacg gagcagatcgccgagttcctggagcagtctgtgaaagattcctgcgaggggctgatggtg aaaaccctggacgtcgatgccacctacgagatcgccaagagatcccacaactggctgaag ctgaagaaggactacctcgatggtgtgggcgacaccctggacctcgtggtgatcggcgcc tacctgggccgtggcaagcgggccggccgctatgggggcttcctgctggccgcctacgac gaggagagtgaggagttccaggccatatgcaagctcggaactggcttcagtgacgaggag ctggaggagcattaccagaggctccaggccctggtgctgcccaccccacgctcctatgtc cgggcggacggtgccgtggctcccgaccactggctggaccccagcgccgtgtgggaggtg aaatgtgccgatctgtccctgtcccccatctaccccgctgcccggggcctggtgagtagc cggggcaccacgggctgcaggcagcaggagggacccagggccgaccttccagatgggaga tggggagcagggggtcatggagcccacgcctgtgctccgggctga

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