Leptonychotes weddellii (Weddell seal): 102750380
Help
Entry
102750380 CDS
T08708
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13167
SR-related and CTD-associated factor 4
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lww03021
]
102750380 (SCAF4)
03041 Spliceosome [BR:
lww03041
]
102750380 (SCAF4)
Transcription machinery [BR:
lww03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102750380 (SCAF4)
Spliceosome [BR:
lww03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
102750380 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102750380
NCBI-ProteinID:
XP_030897236
UniProt:
A0A7F8RVF2
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPQATTNSVPTVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTAPAQP
PEQKAAFPQPEQKTTFDKKLLDRFDYDDEPEAVEEAKKEDAAAAAAAAAASAAPAAAPAA
SPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRMMTIQQDPVHHQVPLPPNGQMPGFGLLPT
PPFPPMAQSVIPPTPPVQQPFQASFQAQNEPLTQKAHQEMEVEQPCIQEVKRHMSDNRKS
RSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKG
LPQIKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQ
DAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWDKVKPEELES
FCEGGMLDSDTLNPDWKGIPKKHENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVPAP
ITVPPPQVPPHQPGPPVVGALQPPTFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHL
PPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTVVSGARG
NAESGDSVKMYGSAVPPAAPTSLPTPPVTQPVSLLGTQGVAPGPVIGLQAPSTGLLGARP
GLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFGMPPPHGMKGPFPPHGP
FVRPGGMPGLGGPGPGPGGPEDRDGRQQPTQPPPQPLPSARSGWCPPPGPGPSARTRPPP
PSAQPPPQPFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGSRNDDRENSNRERREW
GRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEENRGKEKPEVTDRAGGNKTA
EPPISQVGNVDTVSELDKGESESAVVKSSEELPAEATSSVEPEKDSGSAAEAPR
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcacttatggatatgaaacctccc
atctctcgagccaagatgattcttatcactaaagctgctattaaagctattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccagagtacaaggtt
ccaggattatatgtaatcgactcaattgtgcgacagtctcgtcatcagtttggaaccgat
aaagatgtttttgggccaagattctctaaaaacataaccgccacattccaatatttgtat
ctttgtccatctgaagataagagtaaaatagttcgtgtgctgaacctttggcaaaaaaat
ggagtattcaaaattgaaattattcagcctcttttggatatggctgcaggaaccagtaat
gccgccccggtagcagaaaatgttactaataatgaaggttcacctccacctccagttaaa
gtttcttctgaaccaccccaagccactacaaactctgtaccaactgtaccacagttgcct
agctctgatgcttttgctgctgtggcccaactgtttcagacaactcaaggtcaacagctt
cagcagatccttcagacttttcagcagcctccaaaaccacagtctccggcccttgacaat
gctgtgatggctcaggtccaggctatcacagctcagttaaagacagctcctgcacagcca
cctgaacaaaaagctgctttcccccagcctgagcaaaaaactacatttgacaagaagctc
cttgatagatttgattatgatgatgagccagaagctgtggaagaagcaaagaaggaggat
gccgccgccgccgccgccgccgccgccgcctccgccgcgcccgccgccgcgcccgccgct
tcccctccacaggcaccctttgggtttcctggggatggcatgcagcagccagcatatacg
caacatcaaaatatggatcagtttcaacctcgaatgatgacaatacagcaggatccagtg
caccatcaggttccacttcctccgaatggacagatgccaggatttggccttcttcctaca
cctccatttcctcccatggctcagtctgtgattcctccaactccacccgtgcagcagcct
ttccaagcttcttttcaggcacaaaatgaaccacttacccagaaggcacatcaggaaatg
gaagtagaacaaccttgtattcaagaggttaaacggcacatgtctgataacagaaagtca
agatctaggtcagcatccaggtcaccaaaaagaaggcgatctcgatctggttctagatct
cgaaggtcccgtcatcgacgttctcgatcacggtccagagatagacgccgacattctcct
agatctcggtcccaagaaaggcgagatcgagaaaaagaaagagaacgccgacaaaaaggc
cttcctcaaatcaaaccagaaactgcgagtgtttgtagtactacactctgggtgggacag
ctggacaaaaggactactcaacaggatgttgccagtctattagaagagtttggtccaatt
gaatcaattaatatgattcctcccagaggttgtgcctatattgttatggttcataggcaa
gatgcttatcgtgccttgcagaaactgagccgaggaaactataaagtgaaccagaaatcc
ataaagattgcctgggctttaaacaaaggaataaaggcagattataagcagtattgggat
gtagaactgggtgttacttatattccatgggacaaagtcaagcctgaagaactggagagt
ttttgtgaaggaggaatgttggacagtgatacacttaatccagattggaaaggaatcccc
aagaagcatgaaaatgaagttgctcaaaacggaggggcggaaacctcacatacagaacca
gtatcacccattcctaaacctttaccagtgcctgtccctccgattcctgtccctgcacct
ataacagtgccacctccacaggtcccaccacatcagcctggtcctcctgtagttggtgct
ctccagccacccacgttcacacctcccttgggcattccccctccgggttttggtcctggt
gttcctcctccgccgccgcctccaccatttttgcgcccaggatttaatccgatgcattta
ccaccaggttttcttcctcctggacccccacctcctataactccaccagtatccattcct
cctcctcacactccaccaataagcatcccaaactctactatcgctggtataaatgaagac
actacaaaagacttatctattggaaatcccattccaacagtggtgtctggggctagagga
aacgccgagtctggtgacagtgtgaaaatgtatggctctgccgtgccacctgctgcaccc
acgagtctgcccacccctcccgtaacccagcctgtttcacttcttggtacccaaggagtt
gcacctggtcctgtcattgggctccaggcaccatccactggtcttcttggtgcccgccct
ggcctgatcccacttcagcgccctccaggaatgcctccacctcacttacagcggtttcct
ctgatgccacctcgccccatgccgccgcatatgatgcacagaggcccccctccaggaccg
gggggctttggaatgcctccacctcatggaatgaaaggcccctttccaccgcatggcccc
tttgttaggccgggcggaatgccagggctggggggcccagggccaggcccggggggcccc
gaggacagagacggcaggcagcaacccacccagccgccgccccagcccttgccttctgca
cgaagtggatggtgccctccaccgggccctggcccttcagcacgcacacggcctccgccg
ccgtctgcgcagccaccgccacagccgtttagaaatgataacaggcagcagttcaattca
ggtagagaccaagagaggtttggaagaagatcttttggaaatagggtggaaaatgaccgg
gaacggtatgggagccgtaacgatgatagagagaatagtaatcgtgagaggagagagtgg
ggaagaaggagccctgaccgggacaggcacagagacttggaagagaggaatagacgctct
agtgggcatcgagacagagagagagattcgagagatagagagtctcgtagagagaaggaa
gaaaaccgaggaaaggagaagcctgaggtcacagacagggcaggtggtaacaaaaccgct
gaacctcccattagccaagtgggaaatgtagacactgtttcagaacttgataagggggag
tctgagtctgcagttgtaaaatcttctgaagagctacctgctgaggctacctcatccgtt
gaacccgaaaaggattctggctcagcagcagaggctcctcgttag
DBGET
integrated database retrieval system
