Leptonychotes weddellii (Weddell seal): 102750611
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Entry
102750611 CDS
T08708
Symbol
FOCAD
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
lww
Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:
lww00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lww03019
]
102750611 (FOCAD)
Messenger RNA biogenesis [BR:
lww03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102750611 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
102750611
NCBI-ProteinID:
XP_030883622
UniProt:
A0A7F8QQZ4
LinkDB
All DBs
Position
Unknown
AA seq
1709 aa
AA seq
DB search
MSDDIRKRFEFPNSLIQSQAVGHLIAAVLKENGFSEKIHQSTNQTPALNLLWEKCCSDNV
VVRTACCEGLVALVAQDHAEFSYVLNGILNLIPSTRNTHGLIKAIMKLLQMQALKEGQGG
EKNIRNLYTIRNHPQPLITMLEHRPDCWPVLLQQLTAFFQQCPERSEVSCIQIMAPFLWY
LYCEPSQLQEYAKLRLTLLKVLLQPWVPGDPEQPSVLEQQILRLCCDMVPCLQVKDLIQT
TEVMLFIEEVYLSLLRHPVFWKIQLIQLTLQLLCVCEVSLTVTGECSSLIHLLEHSVELL
KEDFPVELVMIGIALLLLQTPASQQKPILSLALKLLSVAGGQKIPRSSWVLVMPVLQILS
STALEDCISMHEEGPSRQQLALNLLEMVQQESYRDDHQKLSYKLAFPITSMYGSIFTAWR
ILEVMREESAASDWLFSIESLLPITTVIPVHVFLLLAHLLVEDQGQNLRQILKVTTLLAQ
ADSSQVPNLIPVLMFKLGRPLEPVLYNDILYTLPTLGVHKVCIGQILRVIQLLGTTPQLR
AVTLRLLTSLWEKQDRVYPELQRLMATSDVPSLSVGREVQWEKLIAKAASIRDICKQRPY
QHGADMLAAASQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR
PLILKTLSELFSLVPSLTVNTAEYENFKVQVLSFLWTHTQNKDPVVANAAYKSLSHFSAG
EHTILHLPEEIRPEIPTPDELDEDEDDEGDEKDVDLSVPGSCYLKLLSLTAPLVLPALEE
FFTSLVKQEMVNMPRGVYHSALKGGVRSDQGKTVAGIPNFILKMYETNKQPGLKPGLAGG
MLFCYDVSTYQSKDGKPLNRLMASRGRSFKQTSLALVHEVHIQLSEWHRAIFLPPAWLAY
MSRAYHAILQVASGHSVLNRVRDMLTEEITKAAAKESPVVKGNALLALSSLAVIVSKHEA
SLSSDSEGVPEVQPNFLSMKEWVSMVSDTLLVIVDSHYQPRGQLFSSFYYKSYSGENTAS
AIARSTAATALSLLVPVFMISCKEKVEEILNMLTARLPGKPRADESQAVQIHMGLALGMF
LSRLCEEKLSDISGQQMNLLLMKSLDALENCCFDPSLEYNTGCILGVGLVLSLMSHSSQT
ESRVHVAASLRKLSTYLDDSGSQSRTFQEVLAYTLSCVCTSAFSTGIIEAAEAEDIMNKL
LMLVENNQQTSGFALALGNLVHGLSLCGHGKAEDLGHRLLPAWIRIVLAQGTPTMLCLAA
LHGMVALVGSEGDVMQLKSEAIQSSHFQARLNEVIKTVTQVISVSGVIGLQSNALWLLGH
LHLSTLSSSQSRTSVPTDYSYLPESSFIRAAVGFFVTGGKKGEEIQQLCLEIATTQAPSS
QNAAALLGLWVTLPLVHGLSLNIKKYLLVSTPLWIKHVSDEQILGFVENVMVAVFKAASP
LPHPELCTSALQGLSQAMKLPSPTHHLWSLLSEATGKIFDLLPNKIRRNDLELYVSIAKC
LSEMTDDEANRVAQITEVRPYLYIYFHYIAKPWSGKKTSLFVSGVLKRMEWLLELMGYIR
NIVYQSTSVQNVALDEALDFLLLLFATAVVTWADHAAPLLLGLSASWLPWHRENGPAGSA
SSFLGRSPMHRVTVQEVLTLLPSSMPLLLQKEPWKEQTQKFIDWLLSIMESPKEGLSAKS
RDLLKATLLSLRVLPEFKKKAVWTRAYGW
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgatatcaggaaaaggtttgaatttccaaattctcttatccaatcacaggcg
gtgggtcatcttattgctgcagtcctgaaggaaaatggtttttcagaaaagatccatcaa
tctacaaaccagactccggctttgaacttgctgtgggagaagtgttgcagtgataatgtg
gtggttcgaacagcctgctgtgagggtctagtggcccttgttgctcaggatcacgcagag
ttcagctatgtgctcaatgggatactcaacctgattccatcaaccaggaatacacatggc
ttgataaaagccattatgaaattattacaaatgcaagctcttaaggaaggacaaggtggg
gagaagaatattcggaatttatatactattagaaatcatcctcagcctttgatcactatg
cttgaacacagacctgactgctggccagtacttttgcagcagctgacggcttttttccag
caatgccctgaaaggtcagaagtttcatgtatccaaataatggcaccatttctatggtat
ctatattgcgaaccatcccagttgcaagaatatgctaaattgcgactaacgctgctcaaa
gtcttacttcaaccgtgggttcctggtgacccagaacaaccatcagtcttggaacaacag
atacttcggctgtgttgtgacatggttccgtgtttgcaggtaaaagatttgatccagaca
acagaagtgatgctgtttattgaggaagtatatttaagccttctgcgtcatcccgttttc
tggaaaattcagcttatccagctgacccttcagctgctgtgtgtctgcgaagtcagctta
acagtaactggggaatgctcatctttaattcaccttttagagcacagtgttgaacttctg
aaggaggattttcctgttgaactggtcatgattggaatagctttacttctgctacagact
ccagcaagtcagcagaaaccaatcctaagtctagctttgaagctcctctctgttgctggg
ggtcagaaaattccaaggtcatcctgggtgctagtgatgccagttctgcagatactgtct
tctactgccttggaagactgtatatccatgcatgaagaaggtccttcgaggcaacagttg
gctttgaaccttttggaaatggtacagcaggagtcctacagagatgaccaccaaaagctc
tcctacaagctcgcgttccccataaccagcatgtatggatcaatatttacagcctggagg
atccttgaagtaatgagagaagagtctgcggccagtgactggctgttttccatagagtcc
ttgctccctattaccacagtgatccctgtgcatgttttccttttgttggctcacctcctt
gttgaagatcaaggacagaatcttcgccagatactgaaggtcactacattattagcccaa
gcagattcctctcaggtaccaaatctgattccagttttaatgttcaaattgggaagacca
ctggaacctgtgttatataatgacatcttgtatactttacctacacttggtgttcacaag
gtgtgtataggccagattctgcgagtgatccagcttcttggaaccactccacaactaaga
gctgtcactctgcgcttgttgacatcgttgtgggaaaagcaggatcgtgtctaccctgaa
ctgcagcgtctcatggccacgtccgatgtaccttctctgtctgtgggcagggaagtccag
tgggaaaaactcatcgccaaagcagcatcaatcagagacatatgtaagcaaaggccctac
cagcatggagcggatatgttggcagccgcttcccaggtgttgaatgaatgcaccaaacct
gatcaagccactccggcagccttggtcctccaaggtcttcacgcgctctgccaagcggag
gtcgtttgcattcgctcaacttggaacgcgctctccccaaagctcagctgtgacacgaga
cctctcattttgaagaccctcagtgaactgttttctctcgttccttccttaacagtcaat
acggctgaatatgagaattttaaagttcaagtcctcagcttcctctggacccacactcaa
aacaaggaccccgttgtggcaaatgccgcatataaatctctgtcacacttcagtgctgga
gaacacaccattcttcatctgcctgaagagataaggcccgaaatccctactcccgatgag
ctagatgaagacgaagatgatgagggcgatgagaaggatgtggatctttctgttcctggc
tcttgctatctcaaactgttgtcacttactgctcctttggtcttaccagctttggaggaa
ttttttacatctcttgtgaagcaggaaatggtgaatatgccccgaggagtgtatcactct
gcattaaaaggaggtgtccggtcagaccaaggaaaaactgtagcaggaatccccaatttt
atattgaaaatgtatgaaaccaataagcagccaggtctgaaacctggccttgcaggtggt
atgttattttgttacgatgtttcaacctatcagagtaaagatggtaaaccattgaatcga
ctgatggccagtagagggcgaagtttcaagcagacctcacttgctctagtgcatgaggtt
cacatccagctttccgagtggcaccgggcaatctttctgccaccggcctggcttgcatat
atgagtcgagcttatcatgccattttacaggtggcatctgggcactcggttttgaacagg
gtccgagacatgttgactgaggagatcaccaaggcggcggccaaggagagcccagtggtc
aagggcaacgcactgttagccttaagcagcctcgctgtcatcgtatccaaacacgaagcc
agtctctcttcagactcggagggggtcccggaggttcagcctaatttcctttcaatgaag
gagtgggtttccatggtgtctgatactctcctggtcattgtggatagccattaccaaccc
agaggacaacttttctcctccttttattataaatcctattctggtgaaaacacagctagc
gcgattgcccgctccactgccgccacggctttgtctctcctcgtgccagttttcatgatt
tcttgcaaagagaaggttgaggaaatcctaaacatgctgactgccaggttacctgggaaa
ccaagagctgatgagtctcaagccgtgcagatccacatgggccttgctttggggatgttt
ctctcgcgcttgtgtgaggagaaactcagcgatatatctggccaacagatgaaccttctt
ctgatgaagtctctggatgccctggaaaattgctgctttgatcctagtcttgaatataac
acgggctgtatattgggcgttgggcttgttctgtccctcatgagccacagcagccaaaca
gagtctcgagttcacgtggcagcatcgcttcggaagctctcgacgtacctagatgacagt
gggagccaaagcagaacatttcaggaggtcctggcctataccctcagctgcgtgtgtacc
tcagcgttcagtactgggatcattgaggctgcagaggctgaagatatcatgaacaagctt
ctgatgttggtagaaaacaaccaacagacttcaggttttgccctggcgttaggaaaccta
gttcatggtttgtctctgtgcggacatggaaaagctgaggacttgggccacagactgctc
cccgcctggatcagaattgttctagcacagggcactcctacaatgctctgtttggcagcg
cttcacggcatggtggccttggtaggctctgaaggggatgtaatgcagctgaagtcagaa
gctatccagtcctctcattttcaagccagacttaatgaagtcattaaaactgtaactcag
gtcatcagtgtgtctggcgtgattggtcttcagtcaaatgctctctggcttctaggacat
cttcacctatctactctgtcctcaagtcagagtagaacctctgttcccaccgactacagc
tatctgcccgagagcagttttattagagcggccgtgggcttcttcgttacaggagggaaa
aaaggagaagagatacagcagctctgccttgaaattgccacgacacaggcaccatcgtcc
cagaatgcagctgcgctcttgggactgtgggtgacgctgccgctggtccacggcctcagt
ttgaatatcaagaaatacctcctggtgtctacacctctgtggataaaacacgtctctgac
gaacagatcctgggctttgttgaaaatgtaatggtggcagtttttaaagctgcttcccca
cttccccatcctgagttatgcacgagtgccttacaggggctgagccaggccatgaaactg
cccagccctacccaccacctctggagtctgctctctgaagctactgggaaaatttttgac
cttctgccaaataagattcggagaaatgatctagagctgtatgtcagtatagcaaaatgc
ctctcagaaatgacagatgatgaagccaatcgggttgcccagattactgaggtaagacca
tatctatatatttatttccattatatagcaaaaccatggtctggtaagaaaacatccctt
tttgtttcaggtgtgttgaagagaatggaatggctcctggaattgatgggttacatcaga
aatattgtgtaccagtcaacatctgttcagaacgtggctctcgatgaggctttggatttc
ttgttgctgctctttgcaaccgcagtggtgacctgggcagaccacgcggcccctctcctc
cttggcctcagtgctagctggttgccatggcatcgggaaaatggcccagctgggtcagct
tcaagcttccttggcaggagtccaatgcacagggtcactgtgcaggaggttctcactctc
cttcccagtagcatgcctcttctgctgcagaaagagccgtggaaggaacagacccagaag
ttcattgactggctcttgagcatcatggaaagccctaaagaaggcctctccgcgaaatcc
agggatcttttgaaagctaccctgttgtccttgcgagttctcccagagtttaagaagaaa
gctgtatggaccagagcgtacggttggtga
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integrated database retrieval system