KEGG   Leptonychotes weddellii (Weddell seal): 102750611
Entry
102750611         CDS       T08708                                 
Symbol
FOCAD
Name
(RefSeq) focadhesin
  KO
K27498  focadhesin
Organism
lww  Leptonychotes weddellii (Weddell seal)
Brite
KEGG Orthology (KO) [BR:lww00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lww03019]
    102750611 (FOCAD)
Messenger RNA biogenesis [BR:lww03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     102750611 (FOCAD)
SSDB
Motif
Pfam: Focadhesin DUF3730 HEAT
Other DBs
NCBI-GeneID: 102750611
NCBI-ProteinID: XP_030883622
UniProt: A0A7F8QQZ4
LinkDB
Position
Unknown
AA seq 1709 aa
MSDDIRKRFEFPNSLIQSQAVGHLIAAVLKENGFSEKIHQSTNQTPALNLLWEKCCSDNV
VVRTACCEGLVALVAQDHAEFSYVLNGILNLIPSTRNTHGLIKAIMKLLQMQALKEGQGG
EKNIRNLYTIRNHPQPLITMLEHRPDCWPVLLQQLTAFFQQCPERSEVSCIQIMAPFLWY
LYCEPSQLQEYAKLRLTLLKVLLQPWVPGDPEQPSVLEQQILRLCCDMVPCLQVKDLIQT
TEVMLFIEEVYLSLLRHPVFWKIQLIQLTLQLLCVCEVSLTVTGECSSLIHLLEHSVELL
KEDFPVELVMIGIALLLLQTPASQQKPILSLALKLLSVAGGQKIPRSSWVLVMPVLQILS
STALEDCISMHEEGPSRQQLALNLLEMVQQESYRDDHQKLSYKLAFPITSMYGSIFTAWR
ILEVMREESAASDWLFSIESLLPITTVIPVHVFLLLAHLLVEDQGQNLRQILKVTTLLAQ
ADSSQVPNLIPVLMFKLGRPLEPVLYNDILYTLPTLGVHKVCIGQILRVIQLLGTTPQLR
AVTLRLLTSLWEKQDRVYPELQRLMATSDVPSLSVGREVQWEKLIAKAASIRDICKQRPY
QHGADMLAAASQVLNECTKPDQATPAALVLQGLHALCQAEVVCIRSTWNALSPKLSCDTR
PLILKTLSELFSLVPSLTVNTAEYENFKVQVLSFLWTHTQNKDPVVANAAYKSLSHFSAG
EHTILHLPEEIRPEIPTPDELDEDEDDEGDEKDVDLSVPGSCYLKLLSLTAPLVLPALEE
FFTSLVKQEMVNMPRGVYHSALKGGVRSDQGKTVAGIPNFILKMYETNKQPGLKPGLAGG
MLFCYDVSTYQSKDGKPLNRLMASRGRSFKQTSLALVHEVHIQLSEWHRAIFLPPAWLAY
MSRAYHAILQVASGHSVLNRVRDMLTEEITKAAAKESPVVKGNALLALSSLAVIVSKHEA
SLSSDSEGVPEVQPNFLSMKEWVSMVSDTLLVIVDSHYQPRGQLFSSFYYKSYSGENTAS
AIARSTAATALSLLVPVFMISCKEKVEEILNMLTARLPGKPRADESQAVQIHMGLALGMF
LSRLCEEKLSDISGQQMNLLLMKSLDALENCCFDPSLEYNTGCILGVGLVLSLMSHSSQT
ESRVHVAASLRKLSTYLDDSGSQSRTFQEVLAYTLSCVCTSAFSTGIIEAAEAEDIMNKL
LMLVENNQQTSGFALALGNLVHGLSLCGHGKAEDLGHRLLPAWIRIVLAQGTPTMLCLAA
LHGMVALVGSEGDVMQLKSEAIQSSHFQARLNEVIKTVTQVISVSGVIGLQSNALWLLGH
LHLSTLSSSQSRTSVPTDYSYLPESSFIRAAVGFFVTGGKKGEEIQQLCLEIATTQAPSS
QNAAALLGLWVTLPLVHGLSLNIKKYLLVSTPLWIKHVSDEQILGFVENVMVAVFKAASP
LPHPELCTSALQGLSQAMKLPSPTHHLWSLLSEATGKIFDLLPNKIRRNDLELYVSIAKC
LSEMTDDEANRVAQITEVRPYLYIYFHYIAKPWSGKKTSLFVSGVLKRMEWLLELMGYIR
NIVYQSTSVQNVALDEALDFLLLLFATAVVTWADHAAPLLLGLSASWLPWHRENGPAGSA
SSFLGRSPMHRVTVQEVLTLLPSSMPLLLQKEPWKEQTQKFIDWLLSIMESPKEGLSAKS
RDLLKATLLSLRVLPEFKKKAVWTRAYGW
NT seq 5130 nt   +upstreamnt  +downstreamnt
atgtcagatgatatcaggaaaaggtttgaatttccaaattctcttatccaatcacaggcg
gtgggtcatcttattgctgcagtcctgaaggaaaatggtttttcagaaaagatccatcaa
tctacaaaccagactccggctttgaacttgctgtgggagaagtgttgcagtgataatgtg
gtggttcgaacagcctgctgtgagggtctagtggcccttgttgctcaggatcacgcagag
ttcagctatgtgctcaatgggatactcaacctgattccatcaaccaggaatacacatggc
ttgataaaagccattatgaaattattacaaatgcaagctcttaaggaaggacaaggtggg
gagaagaatattcggaatttatatactattagaaatcatcctcagcctttgatcactatg
cttgaacacagacctgactgctggccagtacttttgcagcagctgacggcttttttccag
caatgccctgaaaggtcagaagtttcatgtatccaaataatggcaccatttctatggtat
ctatattgcgaaccatcccagttgcaagaatatgctaaattgcgactaacgctgctcaaa
gtcttacttcaaccgtgggttcctggtgacccagaacaaccatcagtcttggaacaacag
atacttcggctgtgttgtgacatggttccgtgtttgcaggtaaaagatttgatccagaca
acagaagtgatgctgtttattgaggaagtatatttaagccttctgcgtcatcccgttttc
tggaaaattcagcttatccagctgacccttcagctgctgtgtgtctgcgaagtcagctta
acagtaactggggaatgctcatctttaattcaccttttagagcacagtgttgaacttctg
aaggaggattttcctgttgaactggtcatgattggaatagctttacttctgctacagact
ccagcaagtcagcagaaaccaatcctaagtctagctttgaagctcctctctgttgctggg
ggtcagaaaattccaaggtcatcctgggtgctagtgatgccagttctgcagatactgtct
tctactgccttggaagactgtatatccatgcatgaagaaggtccttcgaggcaacagttg
gctttgaaccttttggaaatggtacagcaggagtcctacagagatgaccaccaaaagctc
tcctacaagctcgcgttccccataaccagcatgtatggatcaatatttacagcctggagg
atccttgaagtaatgagagaagagtctgcggccagtgactggctgttttccatagagtcc
ttgctccctattaccacagtgatccctgtgcatgttttccttttgttggctcacctcctt
gttgaagatcaaggacagaatcttcgccagatactgaaggtcactacattattagcccaa
gcagattcctctcaggtaccaaatctgattccagttttaatgttcaaattgggaagacca
ctggaacctgtgttatataatgacatcttgtatactttacctacacttggtgttcacaag
gtgtgtataggccagattctgcgagtgatccagcttcttggaaccactccacaactaaga
gctgtcactctgcgcttgttgacatcgttgtgggaaaagcaggatcgtgtctaccctgaa
ctgcagcgtctcatggccacgtccgatgtaccttctctgtctgtgggcagggaagtccag
tgggaaaaactcatcgccaaagcagcatcaatcagagacatatgtaagcaaaggccctac
cagcatggagcggatatgttggcagccgcttcccaggtgttgaatgaatgcaccaaacct
gatcaagccactccggcagccttggtcctccaaggtcttcacgcgctctgccaagcggag
gtcgtttgcattcgctcaacttggaacgcgctctccccaaagctcagctgtgacacgaga
cctctcattttgaagaccctcagtgaactgttttctctcgttccttccttaacagtcaat
acggctgaatatgagaattttaaagttcaagtcctcagcttcctctggacccacactcaa
aacaaggaccccgttgtggcaaatgccgcatataaatctctgtcacacttcagtgctgga
gaacacaccattcttcatctgcctgaagagataaggcccgaaatccctactcccgatgag
ctagatgaagacgaagatgatgagggcgatgagaaggatgtggatctttctgttcctggc
tcttgctatctcaaactgttgtcacttactgctcctttggtcttaccagctttggaggaa
ttttttacatctcttgtgaagcaggaaatggtgaatatgccccgaggagtgtatcactct
gcattaaaaggaggtgtccggtcagaccaaggaaaaactgtagcaggaatccccaatttt
atattgaaaatgtatgaaaccaataagcagccaggtctgaaacctggccttgcaggtggt
atgttattttgttacgatgtttcaacctatcagagtaaagatggtaaaccattgaatcga
ctgatggccagtagagggcgaagtttcaagcagacctcacttgctctagtgcatgaggtt
cacatccagctttccgagtggcaccgggcaatctttctgccaccggcctggcttgcatat
atgagtcgagcttatcatgccattttacaggtggcatctgggcactcggttttgaacagg
gtccgagacatgttgactgaggagatcaccaaggcggcggccaaggagagcccagtggtc
aagggcaacgcactgttagccttaagcagcctcgctgtcatcgtatccaaacacgaagcc
agtctctcttcagactcggagggggtcccggaggttcagcctaatttcctttcaatgaag
gagtgggtttccatggtgtctgatactctcctggtcattgtggatagccattaccaaccc
agaggacaacttttctcctccttttattataaatcctattctggtgaaaacacagctagc
gcgattgcccgctccactgccgccacggctttgtctctcctcgtgccagttttcatgatt
tcttgcaaagagaaggttgaggaaatcctaaacatgctgactgccaggttacctgggaaa
ccaagagctgatgagtctcaagccgtgcagatccacatgggccttgctttggggatgttt
ctctcgcgcttgtgtgaggagaaactcagcgatatatctggccaacagatgaaccttctt
ctgatgaagtctctggatgccctggaaaattgctgctttgatcctagtcttgaatataac
acgggctgtatattgggcgttgggcttgttctgtccctcatgagccacagcagccaaaca
gagtctcgagttcacgtggcagcatcgcttcggaagctctcgacgtacctagatgacagt
gggagccaaagcagaacatttcaggaggtcctggcctataccctcagctgcgtgtgtacc
tcagcgttcagtactgggatcattgaggctgcagaggctgaagatatcatgaacaagctt
ctgatgttggtagaaaacaaccaacagacttcaggttttgccctggcgttaggaaaccta
gttcatggtttgtctctgtgcggacatggaaaagctgaggacttgggccacagactgctc
cccgcctggatcagaattgttctagcacagggcactcctacaatgctctgtttggcagcg
cttcacggcatggtggccttggtaggctctgaaggggatgtaatgcagctgaagtcagaa
gctatccagtcctctcattttcaagccagacttaatgaagtcattaaaactgtaactcag
gtcatcagtgtgtctggcgtgattggtcttcagtcaaatgctctctggcttctaggacat
cttcacctatctactctgtcctcaagtcagagtagaacctctgttcccaccgactacagc
tatctgcccgagagcagttttattagagcggccgtgggcttcttcgttacaggagggaaa
aaaggagaagagatacagcagctctgccttgaaattgccacgacacaggcaccatcgtcc
cagaatgcagctgcgctcttgggactgtgggtgacgctgccgctggtccacggcctcagt
ttgaatatcaagaaatacctcctggtgtctacacctctgtggataaaacacgtctctgac
gaacagatcctgggctttgttgaaaatgtaatggtggcagtttttaaagctgcttcccca
cttccccatcctgagttatgcacgagtgccttacaggggctgagccaggccatgaaactg
cccagccctacccaccacctctggagtctgctctctgaagctactgggaaaatttttgac
cttctgccaaataagattcggagaaatgatctagagctgtatgtcagtatagcaaaatgc
ctctcagaaatgacagatgatgaagccaatcgggttgcccagattactgaggtaagacca
tatctatatatttatttccattatatagcaaaaccatggtctggtaagaaaacatccctt
tttgtttcaggtgtgttgaagagaatggaatggctcctggaattgatgggttacatcaga
aatattgtgtaccagtcaacatctgttcagaacgtggctctcgatgaggctttggatttc
ttgttgctgctctttgcaaccgcagtggtgacctgggcagaccacgcggcccctctcctc
cttggcctcagtgctagctggttgccatggcatcgggaaaatggcccagctgggtcagct
tcaagcttccttggcaggagtccaatgcacagggtcactgtgcaggaggttctcactctc
cttcccagtagcatgcctcttctgctgcagaaagagccgtggaaggaacagacccagaag
ttcattgactggctcttgagcatcatggaaagccctaaagaaggcctctccgcgaaatcc
agggatcttttgaaagctaccctgttgtccttgcgagttctcccagagtttaagaagaaa
gctgtatggaccagagcgtacggttggtga

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