Lacrimispora xylanolytica: OW255_04170
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Entry
OW255_04170 CDS
T08662
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
lxa
Lacrimispora xylanolytica
Pathway
lxa02020
Two-component system
lxa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lxa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OW255_04170
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OW255_04170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lxa03021
]
OW255_04170
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lxa02035
]
OW255_04170
Transcription machinery [BR:
lxa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OW255_04170
Bacterial motility proteins [BR:
lxa02035
]
Flagellar system
Flagellar assembly proteins
Stator
OW255_04170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
DnaD_N
Sigma70_ECF
DUF1492
Motif
Other DBs
NCBI-ProteinID:
WAJ25963
UniProt:
A0ABY7AKI4
LinkDB
All DBs
Position
865871..866647
Genome browser
AA seq
258 aa
AA seq
DB search
MEQDFSQSTNEELLIKYKRSKDIKIKHELVMRYMYMVKSISIQMRDVYLSFAQVEDIVNE
GVLTIMSGIEKFDPEMNVKFETYISKRIRGMIIDMARKQDWIPRSVRKNAKDLDNAAMEL
CNRLGRFPTPKETADHMNISLEKYQEAVGKTNIYSVLSLDMVLEAGSENKKVLQLPAINE
NDQPEDHYLQEEFKQVLVSAINNLKENEQKVISLYYMDELNMKEIAQVMSVSEPRISQIH
SNAIQKLRLYLTNFINGK
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggattttagccaaagcaccaatgaagagttactaattaaatataagcggagt
aaggatattaaaatcaagcatgagctggtaatgcgttatatgtatatggtcaagagcata
tccattcaaatgcgtgatgtatatttaagctttgctcaggtggaagacattgtaaatgaa
ggtgtgcttacaatcatgagcgggattgagaaatttgatcctgagatgaatgtaaagttt
gaaacgtatatttccaagcggatacgcggtatgattattgacatggcaagaaaacaggac
tggattccaagaagtgtgaggaagaatgccaaggatcttgataatgctgccatggaattg
tgcaaccgtcttggccgttttccaacacccaaggaaaccgcagaccatatgaatatcagt
ctggaaaagtatcaggaggccgtaggcaaaaccaatatttacagcgtgctctccttagat
atggttttagaggccggaagtgagaataaaaaggtgcttcagcttcccgccatcaatgaa
aatgaccagccggaggaccattatctccaggaagaattcaagcaggttcttgtttctgcc
ataaataatttaaaagaaaatgaacaaaaggttatttctttgtattatatggacgaatta
aatatgaaggagattgctcaggttatgagtgtcagtgagcccagaatctcccagattcat
tcgaatgccatacaaaagctaaggctttatttgaccaattttataaatgggaaataa
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