Lacrimispora xylanolytica: OW255_04525
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Entry
OW255_04525 CDS
T08662
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lxa
Lacrimispora xylanolytica
Pathway
lxa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lxa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OW255_04525 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lxa03400
]
OW255_04525 (uvrB)
DNA repair and recombination proteins [BR:
lxa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OW255_04525 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OW255_04525 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
DUF87
Kinesin
AAA_22
AAA_5
Microtub_bd
Thg1C
Motif
Other DBs
NCBI-ProteinID:
WAJ24776
LinkDB
All DBs
Position
935610..937595
Genome browser
AA seq
661 aa
AA seq
DB search
MEFKLHSEYAPTGDQPQAIEKLVKGFEEGNQFQTLLGVTGSGKTFTMANVIQRIQKPTLI
IAHNKTLAAQLYGEFKEFFPENAVEYFVSYYDYYQPEAYVPSTDTYIEKDSAINDEIDKL
RHSATAALSEREDVIIVASVSCIYGLGSPIDYKEMVISLRPGMIKDRDEVIHKLIEIQYD
RNDMDFRRGTFRVRGDVLEVFPAYSGSEAYRIEFFGDEVERITEIDTLTGEIRAELGHIA
IFPASHYVVSRDKMERAAEAILLELKEQVSHFKSEDKLLEAQRISERTNFDVEMMKETGF
CSGIENYSRHLTGSQEGEPPCTLIDYFSDDFLIMIDESHITLPQVRGMYAGDRSRKTTLV
NYGFRLPSALDNRPLNFQEFESKINQMLFVSATPSVYEAEHELLRVEQIIRPTGLLDPEI
DVRPVEGQIDDLVSEVNKEIAKKNKILITTLTKRMAEDLTDYMREIGIRIKYLHSDIDTL
ERSEIIRDMRLDVFDVLVGINLLREGLDIPEITLVAILDADKEGFLRSETSLIQTVGRAA
RNSEGHVIMYADHITDSMRVAIEETNRRRAIQQQYNEEHGITPTTIKKSVRDLIAISKAA
IEDEKDFKKDPESMDAKELEKLSKELTKKMHQAAAELNFEEAAKLRDRMVQIKKMLQEID
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaaactacattcagaatatgcccctactggtgaccagccgcaggccattgaa
aagctggtaaaaggatttgaggagggcaatcagtttcagacattgcttggtgttacaggc
tcaggtaagacgtttaccatggccaatgtcattcaaagaattcagaagccaactctgatt
attgcccataataagactctggcggcacagctgtatggagaattcaaggagttcttcccg
gaaaatgcagtggagtattttgtatcttattatgattattatcagccggaagcttatgtt
ccttctacagatacctacatcgaaaaggattctgccattaacgatgagattgataagctg
cgacattccgcaacagcggctctttctgagcgggaggatgtaattattgttgcttccgtg
tcctgtatttatggtcttggaagccccatcgattataaggagatggttatttctttaaga
cctggaatgataaaggatcgggatgaggtaattcataagctgattgaaatccaatatgac
aggaatgatatggatttcaggcgcggtaccttccgggtgaggggagatgttttggaggtt
ttcccagcttattcgggaagtgaagcataccgcatagaatttttcggagacgaagtggag
agaatcacggaaattgatactctaacgggagagatccgggcagagcttggtcatatcgct
atctttcctgcctctcattatgtagtctccagggataagatggagcgtgctgcggaagcg
attcttttagagcttaaagagcaggtttctcattttaaaagtgaagacaagctgttagaa
gctcagagaatttcggaacggaccaattttgatgtggagatgatgaaggaaactggtttc
tgttccggaattgagaactattccagacatttgacgggaagtcaggagggagagccaccc
tgtaccctgattgactatttctccgatgatttcctgattatgattgatgaatcccatatt
acacttcctcaggtcagaggaatgtatgcaggagaccggtccaggaagaccactcttgtc
aattatggcttccggcttccttctgctttggataaccgccctcttaattttcaggagttt
gaatcaaaaatcaatcagatgctgtttgtatcggcgactccttctgtttatgaggcagag
catgaattattgcgggtggagcagatcatacgtcctaccggacttttggatccggaaatc
gatgttagaccggtggaaggccagattgatgatcttgtatctgaggtcaacaaggaaatt
gcgaagaagaacaagatactcattaccacgctgaccaaacgtatggcagaagatttgact
gattatatgagggaaattggcattcggataaagtacctccactcggatattgataccttg
gagcgttcggaaatcattcgggatatgcgtcttgatgtgtttgatgttctggttggaatc
aaccttctaagagaaggactcgatattcctgaaattactctggttgccattcttgatgca
gataaagagggattcctgcgctcggaaacctcactcattcagaccgttggacgtgcggcc
agaaactcggaaggccatgtcatcatgtatgcggaccacattaccgattccatgcgtgtg
gcaattgaagagaccaaccgaagaagggcaatccagcagcagtataatgaagaacatgga
attactccaactaccattaaaaaatccgtccgggatctcattgccatttcaaaagctgcg
attgaagatgagaaggactttaagaaagatccggagtctatggatgccaaggaactggag
aagctttccaaggagctcaccaaaaagatgcatcaggctgctgcagagttaaacttcgag
gaggcggcaaagctgcgtgaccgaatggttcagataaagaagatgcttcaggagattgat
gactaa
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