Lacrimispora xylanolytica: OW255_10415
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Entry
OW255_10415 CDS
T08662
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
lxa
Lacrimispora xylanolytica
Pathway
lxa02024
Quorum sensing
lxa03060
Protein export
lxa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lxa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
OW255_10415 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OW255_10415 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OW255_10415 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lxa02044
]
OW255_10415 (ffh)
Enzymes [BR:
lxa01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
OW255_10415 (ffh)
Secretion system [BR:
lxa02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
OW255_10415 (ffh)
Eukaryotic Sec-SRP protein
OW255_10415 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_33
AAA_22
AAA_17
AAA_30
APS_kinase
ParA
cobW
CLP1_P
KTI12
Thymidylate_kin
nSTAND3
NPHP3_N
Phage_TAC_11
AAA_19
TsaE
MMR_HSR1
AAA_31
ResIII
Diphthamide_syn
AAA
Motif
Other DBs
NCBI-ProteinID:
WAJ25893
LinkDB
All DBs
Position
2207081..2208433
Genome browser
AA seq
450 aa
AA seq
DB search
MAFESLSDKLQNVFKNLRGKGRLSEADVKTALKEVKMALLEADVSFKVVKQFISAVQERA
IGQDVQNSLTPGQMVIKIVNEELINLMGSETTEIQLKPASDMTVILMAGLQGAGKTTTTA
KIAGKLKAKGRKPVLVACDVYRPAAIKQLQINGEKQGVPVFSMGENHKPVDIAKAAIASA
SKNDQNVVILDTAGRLHIDEDMMNELIEIKEAIEVDQTILVVDAMTGQDAVNVAGMFNDK
IGIDGVIVTKLDGDTRGGAALSIRAVTGKPVLYVGMGEKLSDLEQFYPDRMASRILGMGD
ILSLIEKAESQVDEEKAKELSQKIRKAEFDYNDFLDQMSQIKNMGGMASIMSMMPGMGQL
KDVDFDEKAMDRVEAIILSMTTKERTTPELMKNASRKQRVAKGAGVDISEVNRIVKQFDQ
MKKMMKQLPGMMGGGKRHGGGLLGKLKLPF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgagagcttatccgataaattacaaaatgtatttaaaaatttaagaggcaaa
ggacgtttgtctgaagccgacgtaaaaacagcccttaaagaggttaagatggctttactc
gaagccgacgtaagctttaaggttgtaaaacagtttatcagcgctgtgcaggagcgggcc
attggacaagatgtccagaacagtctgactccgggacagatggtaataaagattgtaaac
gaagaattgatcaacttaatgggttctgaaaccacggagatccagttaaagccggccagt
gatatgaccgtaattttaatggctggtcttcagggtgccggtaaaaccacgacaactgct
aaaattgccggtaagctaaaggcaaaaggcagaaaacctgttctcgttgcttgtgacgta
tatcgtccggctgcgattaagcagctgcagatcaacggagaaaagcagggtgtgccggta
ttctccatgggtgaaaaccataagcctgttgatatcgctaaagcagccattgcatcagca
tccaagaatgaccagaatgtagtaattcttgatacggctggacgtcttcatattgatgaa
gacatgatgaatgagctgattgaaatcaaagaggccattgaggtagatcagacgattctt
gtggtcgatgccatgactggacaggacgcagtgaatgttgctggaatgttcaatgataag
attgggattgatggtgttattgtcactaagcttgatggtgataccagaggcggagcagcc
ctttccatccgtgccgtaaccggtaagccggtgctttatgtaggtatgggagagaagctt
tcggatttggaacagttttaccccgaccgtatggcgtcaagaatccttggtatgggagat
attctttctctcattgaaaaggcagaaagccaggtggatgaagaaaaggcaaaagagttg
tcccagaagatccggaaagcagagtttgattacaacgactttttagatcagatgagccag
atcaagaatatgggcggcatggccagtattatgagcatgatgcctggtatgggacaatta
aaagacgttgattttgacgaaaaagccatggaccgcgtggaagcgattattctttccatg
acgaccaaggaacggaccacccctgaactcatgaagaatgcttccagaaagcagcgagtg
gcaaagggtgccggagtggatatcagtgaggtaaaccgaatcgtcaaacagtttgaccag
atgaagaagatgatgaagcagcttccgggaatgatgggcggcggcaagcgtcatggaggc
ggattacttggtaaactgaaattaccgttttaa
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